RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 POLR1AO95602 1720 aaPredicted RBP26.18■■□□□ 1.78
PSEN1-208ENST00000553719 RGL3Q3MIN7 710 aa26.17■■□□□ 1.78
PSEN1-208ENST00000553719 SCAF11Q99590 1463 aaKnown RBP26.17■■□□□ 1.78
PSEN1-208ENST00000553719 NRXN1Q9ULB1 1477 aa26.17■■□□□ 1.78
PSEN1-208ENST00000553719 HSPA2P54652 639 aa26.16■■□□□ 1.78
PSEN1-208ENST00000553719 ZNF326Q5BKZ1 582 aaKnown RBP26.15■■□□□ 1.78
PSEN1-208ENST00000553719 STRCQ7RTU9 1775 aa26.15■■□□□ 1.78
PSEN1-208ENST00000553719 LTKP29376 864 aa26.14■■□□□ 1.78
PSEN1-208ENST00000553719 MED14O60244 1454 aa26.13■■□□□ 1.77
PSEN1-208ENST00000553719 AEBP2Q6ZN18 517 aaPredicted RBP26.13■■□□□ 1.77
PSEN1-208ENST00000553719 L3MBTL2Q969R5 705 aa26.13■■□□□ 1.77
PSEN1-208ENST00000553719 TONSLQ96HA7 1378 aa26.12■■□□□ 1.77
PSEN1-208ENST00000553719 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
PSEN1-208ENST00000553719 TIMELESSQ9UNS1 1208 aa26.11■■□□□ 1.77
PSEN1-208ENST00000553719 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.1■■□□□ 1.77
PSEN1-208ENST00000553719 SETBP1Q9Y6X0 1596 aa26.09■■□□□ 1.77
PSEN1-208ENST00000553719 PLEKHG1Q9ULL1 1385 aa26.08■■□□□ 1.77
PSEN1-208ENST00000553719 PIK3C2GO75747 1445 aa26.08■■□□□ 1.77
PSEN1-208ENST00000553719 TXNDC2Q86VQ3 553 aa26.08■■□□□ 1.77
PSEN1-208ENST00000553719 ANKLE2Q86XL3 938 aa26.08■■□□□ 1.77
PSEN1-208ENST00000553719 STAC3Q96MF2 364 aa26.08■■□□□ 1.77
PSEN1-208ENST00000553719 DCAF11Q8TEB1 546 aa26.07■■□□□ 1.76
PSEN1-208ENST00000553719 ADGRF5Q8IZF2 1346 aa26.07■■□□□ 1.76
PSEN1-208ENST00000553719 IQGAP1P46940 1657 aa26.06■■□□□ 1.76
PSEN1-208ENST00000553719 HDGFP51858 240 aaKnown RBP26.06■■□□□ 1.76
PSEN1-208ENST00000553719 NUTM2DQ5VT03 806 aaPredicted RBP26.06■■□□□ 1.76
PSEN1-208ENST00000553719 EID1Q9Y6B2 187 aa26.06■■□□□ 1.76
PSEN1-208ENST00000553719 VGFO15240 615 aaPredicted RBP26.05■■□□□ 1.76
PSEN1-208ENST00000553719 SETD1AO15047 1707 aaKnown RBP26.05■■□□□ 1.76
PSEN1-208ENST00000553719 PRAG1Q86YV5 1406 aa26.05■■□□□ 1.76
PSEN1-208ENST00000553719 NCKAP5LQ9HCH0 1330 aa26.04■■□□□ 1.76
PSEN1-208ENST00000553719 NPHP4O75161 1426 aaPredicted RBP26.04■■□□□ 1.76
PSEN1-208ENST00000553719 ADAMTS13Q76LX8 1427 aa26.02■■□□□ 1.76
PSEN1-208ENST00000553719 DIP2AQ14689 1571 aa26■■□□□ 1.75
PSEN1-208ENST00000553719 PPP1R15AO75807 674 aaPredicted RBP26■■□□□ 1.75
PSEN1-208ENST00000553719 LAMC1P11047 1609 aa25.99■■□□□ 1.75
PSEN1-208ENST00000553719 KIAA1210Q9ULL0 1709 aa25.99■■□□□ 1.75
PSEN1-208ENST00000553719 KDM2AQ9Y2K7 1162 aa25.98■■□□□ 1.75
PSEN1-208ENST00000553719 ALKQ9UM73 1620 aa25.98■■□□□ 1.75
PSEN1-208ENST00000553719 ASXL1Q8IXJ9 1541 aa25.96■■□□□ 1.75
PSEN1-208ENST00000553719 TRPM1Q7Z4N2 1603 aa25.96■■□□□ 1.75
PSEN1-208ENST00000553719 NBPF8Q3BBV2 869 aa25.94■■□□□ 1.74
PSEN1-208ENST00000553719 ADGRB1O14514 1584 aa25.93■■□□□ 1.74
PSEN1-208ENST00000553719 C14orf93Q9H972 538 aaKnown RBP25.92■■□□□ 1.74
PSEN1-208ENST00000553719 RALGAPBQ86X10 1494 aa25.91■■□□□ 1.74
PSEN1-208ENST00000553719 TBX22Q9Y458 520 aa25.89■■□□□ 1.74
PSEN1-208ENST00000553719 METP08581 1390 aa25.87■■□□□ 1.73
PSEN1-208ENST00000553719 CFAP70Q5T0N1 1121 aa25.87■■□□□ 1.73
PSEN1-208ENST00000553719 SLC26A8Q96RN1 970 aa25.87■■□□□ 1.73
PSEN1-208ENST00000553719 SENP3Q9H4L4 574 aaPredicted RBP25.86■■□□□ 1.73
PSEN1-208ENST00000553719 NWD1Q149M9 1564 aa25.86■■□□□ 1.73
PSEN1-208ENST00000553719 GPRASP1Q5JY77 1395 aa25.85■■□□□ 1.73
PSEN1-208ENST00000553719 PIK3R4Q99570 1358 aa25.85■■□□□ 1.73
PSEN1-208ENST00000553719 CHD2O14647 1828 aaKnown RBP25.84■■□□□ 1.73
PSEN1-208ENST00000553719 XRN1Q8IZH2 1706 aaKnown RBP25.84■■□□□ 1.73
PSEN1-208ENST00000553719 DMRT2Q9Y5R5 561 aa25.84■■□□□ 1.73
PSEN1-208ENST00000553719 PTPRUQ92729 1446 aa25.83■■□□□ 1.73
PSEN1-208ENST00000553719 BCANQ96GW7 911 aa25.82■■□□□ 1.72
PSEN1-208ENST00000553719 KNDC1Q76NI1 1749 aa25.81■■□□□ 1.72
PSEN1-208ENST00000553719 STRCP1A6NGW2 1772 aa25.8■■□□□ 1.72
PSEN1-208ENST00000553719 NBPF1Q3BBV0 1214 aa25.8■■□□□ 1.72
PSEN1-208ENST00000553719 TECPR2O15040 1411 aa25.8■■□□□ 1.72
PSEN1-208ENST00000553719 YTHDC2Q9H6S0 1430 aaKnown RBP25.78■■□□□ 1.72
PSEN1-208ENST00000553719 LRPPRCP42704 1394 aaKnown RBP25.77■■□□□ 1.72
PSEN1-208ENST00000553719 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
PSEN1-208ENST00000553719 TMEM132EQ6IEE7 984 aa25.76■■□□□ 1.71
PSEN1-208ENST00000553719 ROCK2O75116 1388 aaKnown RBP25.76■■□□□ 1.71
PSEN1-208ENST00000553719 CPS1P31327 1500 aa25.76■■□□□ 1.71
PSEN1-208ENST00000553719 DLC1Q96QB1 1528 aa25.74■■□□□ 1.71
PSEN1-208ENST00000553719 ABCC11Q96J66 1382 aa25.74■■□□□ 1.71
PSEN1-208ENST00000553719 NKTRP30414 1462 aaKnown RBP25.73■■□□□ 1.71
PSEN1-208ENST00000553719 PTCH1Q13635 1447 aa25.73■■□□□ 1.71
PSEN1-208ENST00000553719 ARHGEF28Q8N1W1 1705 aaKnown RBP25.73■■□□□ 1.71
PSEN1-208ENST00000553719 KCNA6P17658 529 aa25.72■■□□□ 1.71
PSEN1-208ENST00000553719 LTBP4Q8N2S1 1624 aa25.7■■□□□ 1.71
PSEN1-208ENST00000553719 ZNF335Q9H4Z2 1342 aaPredicted RBP25.69■■□□□ 1.7
PSEN1-208ENST00000553719 AMOTL2Q9Y2J4 779 aa25.69■■□□□ 1.7
PSEN1-208ENST00000553719 ROBO2Q9HCK4 1378 aa25.68■■□□□ 1.7
PSEN1-208ENST00000553719 FAM135BQ49AJ0 1406 aa25.66■■□□□ 1.7
PSEN1-208ENST00000553719 CARD11Q9BXL7 1154 aa25.66■■□□□ 1.7
PSEN1-208ENST00000553719 SIRT1Q96EB6 747 aa25.64■■□□□ 1.7
PSEN1-208ENST00000553719 STK26Q9P289 416 aa25.62■■□□□ 1.69
PSEN1-208ENST00000553719 LRRC7Q96NW7 1537 aa25.62■■□□□ 1.69
PSEN1-208ENST00000553719 XIRP1Q702N8 1843 aaKnown RBP25.61■■□□□ 1.69
PSEN1-208ENST00000553719 TRAK1Q9UPV9 953 aa25.61■■□□□ 1.69
PSEN1-208ENST00000553719 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
PSEN1-208ENST00000553719 USP47Q96K76 1375 aa25.59■■□□□ 1.69
PSEN1-208ENST00000553719 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.57■■□□□ 1.68
PSEN1-208ENST00000553719 EIF3AQ14152 1382 aaKnown RBP25.56■■□□□ 1.68
PSEN1-208ENST00000553719 NCOA3Q9Y6Q9 1424 aa25.56■■□□□ 1.68
PSEN1-208ENST00000553719 QRICH2Q9H0J4 1663 aa25.56■■□□□ 1.68
PSEN1-208ENST00000553719 NALCNQ8IZF0 1738 aa25.56■■□□□ 1.68
PSEN1-208ENST00000553719 PRAM1Q96QH2 718 aa25.55■■□□□ 1.68
PSEN1-208ENST00000553719 ADGRB2O60241 1585 aa25.55■■□□□ 1.68
PSEN1-208ENST00000553719 TMEM94Q12767 1356 aa25.55■■□□□ 1.68
PSEN1-208ENST00000553719 WAPLQ7Z5K2 1190 aa25.54■■□□□ 1.68
PSEN1-208ENST00000553719 SBNO2Q9Y2G9 1366 aa25.53■■□□□ 1.68
PSEN1-208ENST00000553719 CENPJQ9HC77 1338 aaPredicted RBP25.52■■□□□ 1.68
PSEN1-208ENST00000553719 ADGRL3Q9HAR2 1447 aa25.52■■□□□ 1.68
PSEN1-208ENST00000553719 PROSER2Q86WR7 435 aaPredicted RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms