RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 ZFYVE9O95405 1425 aa15.39■□□□□ 0.05
CHD8-205ENST00000553651 AHDC1Q5TGY3 1603 aaPredicted RBP15.39■□□□□ 0.05
CHD8-205ENST00000553651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.057e-9■□□□□ 8.1
CHD8-205ENST00000553651 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
CHD8-205ENST00000553651 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
CHD8-205ENST00000553651 ZNF772Q68DY9 489 aaPredicted RBP15.37■□□□□ 0.05
CHD8-205ENST00000553651 TRIM52Q96A61 297 aa15.37■□□□□ 0.05
CHD8-205ENST00000553651 NCOA3Q9Y6Q9 1424 aa15.36■□□□□ 0.05
CHD8-205ENST00000553651 CDK12Q9NYV4 1490 aaPredicted RBP15.36■□□□□ 0.05
CHD8-205ENST00000553651 DIP2AQ14689 1571 aa15.36■□□□□ 0.05
CHD8-205ENST00000553651 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
CHD8-205ENST00000553651 KANK1Q14678 1352 aa15.35■□□□□ 0.05
CHD8-205ENST00000553651 VPS8Q8N3P4 1428 aa15.34■□□□□ 0.05
CHD8-205ENST00000553651 MYO5BQ9ULV0 1848 aa15.33■□□□□ 0.05
CHD8-205ENST00000553651 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.04
CHD8-205ENST00000553651 DAPK1P53355 1430 aa15.33■□□□□ 0.04
CHD8-205ENST00000553651 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
CHD8-205ENST00000553651 RXRBP28702 533 aa15.31■□□□□ 0.04
CHD8-205ENST00000553651 MEX3CQ5U5Q3 659 aaKnown RBP15.31■□□□□ 0.04
CHD8-205ENST00000553651 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
CHD8-205ENST00000553651 ADAMTS13Q76LX8 1427 aa15.31■□□□□ 0.04
CHD8-205ENST00000553651 PTPN23Q9H3S7 1636 aa15.31■□□□□ 0.04
CHD8-205ENST00000553651 TMEM131LA2VDJ0 1609 aa15.3■□□□□ 0.04
CHD8-205ENST00000553651 RIMS2Q9UQ26 1411 aa15.3■□□□□ 0.04
CHD8-205ENST00000553651 GCC2Q8IWJ2 1684 aa15.28■□□□□ 0.04
CHD8-205ENST00000553651 BCANQ96GW7 911 aa15.28■□□□□ 0.04
CHD8-205ENST00000553651 RPRD2Q5VT52 1461 aaKnown RBP15.27■□□□□ 0.04
CHD8-205ENST00000553651 BRINP3Q76B58 766 aa15.27■□□□□ 0.04
CHD8-205ENST00000553651 CADPS2Q86UW7 1296 aa15.27■□□□□ 0.04
CHD8-205ENST00000553651 C19orf44Q9H6X5 657 aa15.27■□□□□ 0.04
CHD8-205ENST00000553651 RGS12O14924 1447 aa15.26■□□□□ 0.03
CHD8-205ENST00000553651 AFF2P51816 1311 aa15.26■□□□□ 0.03
CHD8-205ENST00000553651 SETD5Q9C0A6 1442 aa15.26■□□□□ 0.03
CHD8-205ENST00000553651 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
CHD8-205ENST00000553651 PTPRUQ92729 1446 aa15.25■□□□□ 0.03
CHD8-205ENST00000553651 PIK3R4Q99570 1358 aa15.24■□□□□ 0.03
CHD8-205ENST00000553651 CHIC2Q9UKJ5 165 aa15.24■□□□□ 0.03
CHD8-205ENST00000553651 ASXL1Q8IXJ9 1541 aa15.23■□□□□ 0.03
CHD8-205ENST00000553651 ADGRL2O95490 1459 aa15.23■□□□□ 0.03
CHD8-205ENST00000553651 NUTM2BA6NNL0 878 aaPredicted RBP15.23■□□□□ 0.03
CHD8-205ENST00000553651 NUTM2EB1AL46 878 aaPredicted RBP15.23■□□□□ 0.03
CHD8-205ENST00000553651 NUTM2AQ8IVF1 878 aaPredicted RBP15.23■□□□□ 0.03
CHD8-205ENST00000553651 NHSL1Q5SYE7 1610 aa15.23■□□□□ 0.03
CHD8-205ENST00000553651 PPP1R15AO75807 674 aaPredicted RBP15.22■□□□□ 0.03
CHD8-205ENST00000553651 ATF3P18847 181 aa15.22■□□□□ 0.03
CHD8-205ENST00000553651 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
CHD8-205ENST00000553651 DCCP43146 1447 aa15.22■□□□□ 0.03
CHD8-205ENST00000553651 MST1RQ04912 1400 aa15.2■□□□□ 0.02
CHD8-205ENST00000553651 HDGFP51858 240 aaKnown RBP15.2■□□□□ 0.02
CHD8-205ENST00000553651 RBM6P78332 1123 aaKnown RBP15.19■□□□□ 0.02
CHD8-205ENST00000553651 NUTM2DQ5VT03 806 aaPredicted RBP15.19■□□□□ 0.02
CHD8-205ENST00000553651 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.19■□□□□ 0.02
CHD8-205ENST00000553651 XRN1Q8IZH2 1706 aaKnown RBP15.19■□□□□ 0.02
CHD8-205ENST00000553651 TRPM2O94759 1503 aa15.18■□□□□ 0.02
CHD8-205ENST00000553651 QTRT2Q9H974 415 aaKnown RBP15.18■□□□□ 0.02
CHD8-205ENST00000553651 AMOTL2Q9Y2J4 779 aa15.18■□□□□ 0.02
CHD8-205ENST00000553651 PNPLA6Q8IY17 1366 aa15.18■□□□□ 0.02
CHD8-205ENST00000553651 UNC13BO14795 1591 aa15.18■□□□□ 0.02
CHD8-205ENST00000553651 NRXN3Q9Y4C0 1643 aa15.17■□□□□ 0.02
CHD8-205ENST00000553651 ANKRD50Q9ULJ7 1429 aa15.17■□□□□ 0.02
CHD8-205ENST00000553651 EP400Q96L91 3159 aa15.16■□□□□ 0.02
CHD8-205ENST00000553651 E9PCH4 1651 aa15.16■□□□□ 0.02
CHD8-205ENST00000553651 DDX17Q92841 729 aaKnown RBP15.15■□□□□ 0.02
CHD8-205ENST00000553651 LRRC59Q96AG4 307 aaKnown RBP15.15■□□□□ 0.02
CHD8-205ENST00000553651 C8orf37Q96NL8 207 aa15.15■□□□□ 0.02
CHD8-205ENST00000553651 SETBP1Q9Y6X0 1596 aa15.13■□□□□ 0.01
CHD8-205ENST00000553651 LOC105371045A0A1W2PR82 267 aa15.12■□□□□ 0.01
CHD8-205ENST00000553651 CHGAP10645 457 aaKnown RBP15.12■□□□□ 0.01
CHD8-205ENST00000553651 LAMC1P11047 1609 aa15.12■□□□□ 0.01
CHD8-205ENST00000553651 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
CHD8-205ENST00000553651 ADGRL3Q9HAR2 1447 aa15.1■□□□□ 0.01
CHD8-205ENST00000553651 METP08581 1390 aa15.1■□□□□ 0.01
CHD8-205ENST00000553651 NALCNQ8IZF0 1738 aa15.09■□□□□ 0.01
CHD8-205ENST00000553651 NGLY1Q96IV0 654 aa15.08■□□□□ 0
CHD8-205ENST00000553651 ATRNO75882 1429 aa15.08■□□□□ 0
CHD8-205ENST00000553651 IQGAP3Q86VI3 1631 aa15.07■□□□□ 0
CHD8-205ENST00000553651 ADAMTS2O95450 1211 aa15.07■□□□□ 0
CHD8-205ENST00000553651 FNBP4Q8N3X1 1017 aaPredicted RBP15.06■□□□□ 0
CHD8-205ENST00000553651 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
CHD8-205ENST00000553651 SOS2Q07890 1332 aaPredicted RBP15.06■□□□□ 0
CHD8-205ENST00000553651 C1orf167Q5SNV9 1468 aa15.06■□□□□ 0
CHD8-205ENST00000553651 PTCH1Q13635 1447 aa15.04■□□□□ -0
CHD8-205ENST00000553651 USP21Q9UK80 565 aa15.04■□□□□ -0
CHD8-205ENST00000553651 COL22A1Q8NFW1 1626 aaPredicted RBP15.03■□□□□ -0
CHD8-205ENST00000553651 TRPC5Q9UL62 973 aaPredicted RBP15.03■□□□□ -0
CHD8-205ENST00000553651 BCL9LQ86UU0 1499 aa15.01□□□□□ -0.01
CHD8-205ENST00000553651 ORAI2Q96SN7 254 aa15.01□□□□□ -0.01
CHD8-205ENST00000553651 MYOM2P54296 1465 aa15.01□□□□□ -0.01
CHD8-205ENST00000553651 FAM50AQ14320 339 aaKnown RBP15□□□□□ -0.01
CHD8-205ENST00000553651 NEXMIFQ5QGS0 1516 aa14.99□□□□□ -0.01
CHD8-205ENST00000553651 CCDC125Q86Z20 511 aa14.99□□□□□ -0.01
CHD8-205ENST00000553651 APLP2Q06481 763 aa14.98□□□□□ -0.01
CHD8-205ENST00000553651 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
CHD8-205ENST00000553651 SPHKAPQ2M3C7 1700 aa14.97□□□□□ -0.01
CHD8-205ENST00000553651 FOXD1Q16676 465 aa14.97□□□□□ -0.01
CHD8-205ENST00000553651 PRAG1Q86YV5 1406 aa14.97□□□□□ -0.01
CHD8-205ENST00000553651 NUP155O75694 1391 aa14.97□□□□□ -0.01
CHD8-205ENST00000553651 ROBO2Q9HCK4 1378 aa14.97□□□□□ -0.01
CHD8-205ENST00000553651 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
CHD8-205ENST00000553651 PXDNQ92626 1479 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms