RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 SENP3Q9H4L4 574 aaPredicted RBP13.97□□□□□ -0.17
CHD8-204ENST00000553622 UHRF1BP1Q6BDS2 1440 aa13.97□□□□□ -0.17
CHD8-204ENST00000553622 RPGRIP1LQ68CZ1 1315 aa13.95□□□□□ -0.18
CHD8-204ENST00000553622 RIMS2Q9UQ26 1411 aa13.95□□□□□ -0.18
CHD8-204ENST00000553622 MYOM2P54296 1465 aa13.93□□□□□ -0.18
CHD8-204ENST00000553622 THEMISQ8N1K5 641 aaPredicted RBP13.93□□□□□ -0.18
CHD8-204ENST00000553622 TRPM1Q7Z4N2 1603 aa13.93□□□□□ -0.18
CHD8-204ENST00000553622 PRAG1Q86YV5 1406 aa13.92□□□□□ -0.18
CHD8-204ENST00000553622 NBPF8Q3BBV2 869 aa13.92□□□□□ -0.18
CHD8-204ENST00000553622 BCANQ96GW7 911 aa13.92□□□□□ -0.18
CHD8-204ENST00000553622 POLR1AO95602 1720 aaPredicted RBP13.92□□□□□ -0.18
CHD8-204ENST00000553622 ADGRF5Q8IZF2 1346 aa13.91□□□□□ -0.18
CHD8-204ENST00000553622 VGFO15240 615 aaPredicted RBP13.91□□□□□ -0.18
CHD8-204ENST00000553622 HDGFP51858 240 aaKnown RBP13.91□□□□□ -0.18
CHD8-204ENST00000553622 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
CHD8-204ENST00000553622 KIAA1210Q9ULL0 1709 aa13.9□□□□□ -0.18
CHD8-204ENST00000553622 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
CHD8-204ENST00000553622 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
CHD8-204ENST00000553622 IQGAP1P46940 1657 aa13.9□□□□□ -0.18
CHD8-204ENST00000553622 ZFYVE9O95405 1425 aa13.9□□□□□ -0.19
CHD8-204ENST00000553622 TXNDC2Q86VQ3 553 aa13.89□□□□□ -0.19
CHD8-204ENST00000553622 STAC3Q96MF2 364 aa13.89□□□□□ -0.19
CHD8-204ENST00000553622 SLIT1O75093 1534 aa13.89□□□□□ -0.19
CHD8-204ENST00000553622 LAMC1P11047 1609 aa13.88□□□□□ -0.19
CHD8-204ENST00000553622 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
CHD8-204ENST00000553622 SCAF11Q99590 1463 aaKnown RBP13.87□□□□□ -0.19
CHD8-204ENST00000553622 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
CHD8-204ENST00000553622 NRXN1Q9ULB1 1477 aa13.87□□□□□ -0.19
CHD8-204ENST00000553622 ROCK2O75116 1388 aaKnown RBP13.86□□□□□ -0.19
CHD8-204ENST00000553622 PIK3C2GO75747 1445 aa13.86□□□□□ -0.19
CHD8-204ENST00000553622 LTKP29376 864 aa13.85□□□□□ -0.19
CHD8-204ENST00000553622 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
CHD8-204ENST00000553622 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
CHD8-204ENST00000553622 ALKQ9UM73 1620 aa13.84□□□□□ -0.19
CHD8-204ENST00000553622 HSPA2P54652 639 aa13.84□□□□□ -0.19
CHD8-204ENST00000553622 NBPF1Q3BBV0 1214 aa13.84□□□□□ -0.19
CHD8-204ENST00000553622 ANKLE2Q86XL3 938 aa13.84□□□□□ -0.19
CHD8-204ENST00000553622 LMTK3Q96Q04 1460 aa13.84□□□□□ -0.19
CHD8-204ENST00000553622 SETD1AO15047 1707 aaKnown RBP13.84□□□□□ -0.19
CHD8-204ENST00000553622 CARD11Q9BXL7 1154 aa13.83□□□□□ -0.2
CHD8-204ENST00000553622 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.2
CHD8-204ENST00000553622 PLEKHG1Q9ULL1 1385 aa13.82□□□□□ -0.2
CHD8-204ENST00000553622 C14orf93Q9H972 538 aaKnown RBP13.81□□□□□ -0.2
CHD8-204ENST00000553622 NCKAP5LQ9HCH0 1330 aa13.81□□□□□ -0.2
CHD8-204ENST00000553622 TMEM132EQ6IEE7 984 aa13.8□□□□□ -0.2
CHD8-204ENST00000553622 STRCQ7RTU9 1775 aa13.79□□□□□ -0.2
CHD8-204ENST00000553622 AEBP2Q6ZN18 517 aaPredicted RBP13.79□□□□□ -0.2
CHD8-204ENST00000553622 SLC26A8Q96RN1 970 aa13.79□□□□□ -0.2
CHD8-204ENST00000553622 HIRIP3Q9BW71 556 aaPredicted RBP13.78□□□□□ -0.2
CHD8-204ENST00000553622 STK26Q9P289 416 aa13.78□□□□□ -0.2
CHD8-204ENST00000553622 USP47Q96K76 1375 aa13.78□□□□□ -0.2
CHD8-204ENST00000553622 NPHP4O75161 1426 aaPredicted RBP13.78□□□□□ -0.2
CHD8-204ENST00000553622 ASXL1Q8IXJ9 1541 aa13.78□□□□□ -0.2
CHD8-204ENST00000553622 DIP2AQ14689 1571 aa13.78□□□□□ -0.2
CHD8-204ENST00000553622 ADGRB1O14514 1584 aa13.77□□□□□ -0.21
CHD8-204ENST00000553622 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHD8-204ENST00000553622 ARHGEF28Q8N1W1 1705 aaKnown RBP13.77□□□□□ -0.21
CHD8-204ENST00000553622 ADAMTS13Q76LX8 1427 aa13.76□□□□□ -0.21
CHD8-204ENST00000553622 GPRASP1Q5JY77 1395 aa13.76□□□□□ -0.21
CHD8-204ENST00000553622 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
CHD8-204ENST00000553622 TRAK1Q9UPV9 953 aa13.75□□□□□ -0.21
CHD8-204ENST00000553622 QRICH2Q9H0J4 1663 aa13.75□□□□□ -0.21
CHD8-204ENST00000553622 METP08581 1390 aa13.74□□□□□ -0.21
CHD8-204ENST00000553622 EIF3AQ14152 1382 aaKnown RBP13.74□□□□□ -0.21
CHD8-204ENST00000553622 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
CHD8-204ENST00000553622 KNDC1Q76NI1 1749 aa13.74□□□□□ -0.21
CHD8-204ENST00000553622 MED14O60244 1454 aa13.74□□□□□ -0.21
CHD8-204ENST00000553622 YTHDC2Q9H6S0 1430 aaKnown RBP13.73□□□□□ -0.21
CHD8-204ENST00000553622 TBX22Q9Y458 520 aa13.72□□□□□ -0.21
CHD8-204ENST00000553622 ST20-MTHFSA0A0A6YYL1 179 aa13.71□□□□□ -0.21
CHD8-204ENST00000553622 LRPPRCP42704 1394 aaKnown RBP13.71□□□□□ -0.22
CHD8-204ENST00000553622 XRN1Q8IZH2 1706 aaKnown RBP13.7□□□□□ -0.22
CHD8-204ENST00000553622 ZNF316A6NFI3 1004 aaPredicted RBP13.69□□□□□ -0.22
CHD8-204ENST00000553622 SAFB2Q14151 953 aaKnown RBP eCLIP13.69□□□□□ -0.22
CHD8-204ENST00000553622 POGKQ9P215 609 aa13.69□□□□□ -0.22
CHD8-204ENST00000553622 PTPRUQ92729 1446 aa13.68□□□□□ -0.22
CHD8-204ENST00000553622 AMOTL2Q9Y2J4 779 aa13.68□□□□□ -0.22
CHD8-204ENST00000553622 CPS1P31327 1500 aa13.68□□□□□ -0.22
CHD8-204ENST00000553622 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
CHD8-204ENST00000553622 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
CHD8-204ENST00000553622 POLR3GLQ9BT43 218 aa13.67□□□□□ -0.22
CHD8-204ENST00000553622 DLC1Q96QB1 1528 aa13.67□□□□□ -0.22
CHD8-204ENST00000553622 STRCP1A6NGW2 1772 aa13.66□□□□□ -0.22
CHD8-204ENST00000553622 ABCC11Q96J66 1382 aa13.66□□□□□ -0.22
CHD8-204ENST00000553622 PIK3R4Q99570 1358 aa13.66□□□□□ -0.22
CHD8-204ENST00000553622 WAPLQ7Z5K2 1190 aa13.65□□□□□ -0.22
CHD8-204ENST00000553622 NWD1Q149M9 1564 aa13.64□□□□□ -0.23
CHD8-204ENST00000553622 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
CHD8-204ENST00000553622 KCNA6P17658 529 aa13.64□□□□□ -0.23
CHD8-204ENST00000553622 TECPR2O15040 1411 aa13.64□□□□□ -0.23
CHD8-204ENST00000553622 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
CHD8-204ENST00000553622 ROBO2Q9HCK4 1378 aa13.63□□□□□ -0.23
CHD8-204ENST00000553622 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
CHD8-204ENST00000553622 TMF1P82094 1093 aa13.62□□□□□ -0.23
CHD8-204ENST00000553622 PTCH1Q13635 1447 aa13.62□□□□□ -0.23
CHD8-204ENST00000553622 FAM135BQ49AJ0 1406 aa13.62□□□□□ -0.23
CHD8-204ENST00000553622 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
CHD8-204ENST00000553622 TESK2Q96S53 571 aa13.61□□□□□ -0.23
CHD8-204ENST00000553622 DISP3Q9P2K9 1392 aa13.6□□□□□ -0.23
CHD8-204ENST00000553622 C14orf37Q86TY3 774 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms