RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MYT1LQ9UL68 1186 aa7.18□□□□□ -1.26
TDP1-207ENST00000553617 TRIM26Q12899 539 aaPredicted RBP7.17□□□□□ -1.26
TDP1-207ENST00000553617 DIXDC1Q155Q3 683 aa7.17□□□□□ -1.26
TDP1-207ENST00000553617 PPP2R2DQ66LE6 453 aa7.17□□□□□ -1.26
TDP1-207ENST00000553617 BANK1Q8NDB2 785 aa7.17□□□□□ -1.26
TDP1-207ENST00000553617 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
TDP1-207ENST00000553617 TBC1D2Q9BYX2 928 aa7.17□□□□□ -1.26
TDP1-207ENST00000553617 FAM198AQ9UFP1 575 aa7.17□□□□□ -1.26
TDP1-207ENST00000553617 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.16□□□□□ -1.26
TDP1-207ENST00000553617 RFC5P40937 340 aa7.16□□□□□ -1.26
TDP1-207ENST00000553617 RBM46Q8TBY0 533 aaKnown RBP7.16□□□□□ -1.26
TDP1-207ENST00000553617 HRCP23327 699 aa7.15□□□□□ -1.26
TDP1-207ENST00000553617 TUSC1Q2TAM9 212 aa7.15□□□□□ -1.26
TDP1-207ENST00000553617 EYA1Q99502 592 aa7.15□□□□□ -1.26
TDP1-207ENST00000553617 LIMD1Q9UGP4 676 aa7.15□□□□□ -1.26
TDP1-207ENST00000553617 COG6Q9Y2V7 657 aa7.15□□□□□ -1.26
TDP1-207ENST00000553617 CD46P15529 392 aa7.14□□□□□ -1.27
TDP1-207ENST00000553617 SPIRE2Q8WWL2 714 aa7.14□□□□□ -1.27
TDP1-207ENST00000553617 LHX6Q9UPM6 363 aa7.14□□□□□ -1.27
TDP1-207ENST00000553617 RCCD1A6NED2 376 aa7.13□□□□□ -1.27
TDP1-207ENST00000553617 RAD21O60216 631 aa7.13□□□□□ -1.27
TDP1-207ENST00000553617 COL9A1P20849 921 aa7.13□□□□□ -1.27
TDP1-207ENST00000553617 SNRKQ9NRH2 765 aa7.13□□□□□ -1.27
TDP1-207ENST00000553617 SPTLC1O15269 473 aa7.12□□□□□ -1.27
TDP1-207ENST00000553617 TMEM259Q4ZIN3 620 aa7.12□□□□□ -1.27
TDP1-207ENST00000553617 RIC3Q7Z5B4 369 aa7.12□□□□□ -1.27
TDP1-207ENST00000553617 BCL2L12Q9HB09 334 aa7.12□□□□□ -1.27
TDP1-207ENST00000553617 TSKSQ9UJT2 592 aa7.12□□□□□ -1.27
TDP1-207ENST00000553617 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
TDP1-207ENST00000553617 C3orf80F5H4A9 247 aa7.11□□□□□ -1.27
TDP1-207ENST00000553617 SOCS7O14512 581 aa7.11□□□□□ -1.27
TDP1-207ENST00000553617 LSM11P83369 360 aaKnown RBP eCLIP7.11□□□□□ -1.27
TDP1-207ENST00000553617 ANKRD13DQ6ZTN6 518 aa7.11□□□□□ -1.27
TDP1-207ENST00000553617 ATP1B4Q9UN42 357 aaPredicted RBP7.11□□□□□ -1.27
TDP1-207ENST00000553617 PPP1R3GB7ZBB8 358 aa7.1□□□□□ -1.27
TDP1-207ENST00000553617 GJA5P36382 358 aa7.1□□□□□ -1.27
TDP1-207ENST00000553617 RSBN1LQ6PCB5 846 aaPredicted RBP7.1□□□□□ -1.27
TDP1-207ENST00000553617 MTMR14Q8NCE2 650 aa7.1□□□□□ -1.27
TDP1-207ENST00000553617 DNAJB2P25686 324 aa7.09□□□□□ -1.27
TDP1-207ENST00000553617 PBX2P40425 430 aa7.09□□□□□ -1.27
TDP1-207ENST00000553617 SULF1Q8IWU6 871 aa7.09□□□□□ -1.27
TDP1-207ENST00000553617 TMEM134Q9H6X4 195 aa7.09□□□□□ -1.27
TDP1-207ENST00000553617 SERPINA10Q9UK55 444 aa7.09□□□□□ -1.27
TDP1-207ENST00000553617 PSDA5PKW4 1024 aaPredicted RBP7.08□□□□□ -1.28
TDP1-207ENST00000553617 PPP4R3BQ5MIZ7 849 aa7.08□□□□□ -1.28
TDP1-207ENST00000553617 NUDT18Q6ZVK8 323 aa7.08□□□□□ -1.28
TDP1-207ENST00000553617 MOXD2PA6NHM9 499 aa7.07□□□□□ -1.28
TDP1-207ENST00000553617 TRIM6-TRIM34B2RNG4 842 aa7.07□□□□□ -1.28
TDP1-207ENST00000553617 NBPF26B4DH59 902 aa7.07□□□□□ -1.28
TDP1-207ENST00000553617 LILRB3O75022 631 aa7.07□□□□□ -1.28
TDP1-207ENST00000553617 PDIA4P13667 645 aaKnown RBP7.07□□□□□ -1.28
TDP1-207ENST00000553617 POTEEQ6S8J3 1075 aa7.07□□□□□ -1.28
TDP1-207ENST00000553617 PTPREP23469 700 aa7.06□□□□□ -1.28
TDP1-207ENST00000553617 QPCTQ16769 361 aa7.06□□□□□ -1.28
TDP1-207ENST00000553617 TATDN2Q93075 761 aa7.06□□□□□ -1.28
TDP1-207ENST00000553617 CCDC97Q96F63 343 aaPredicted RBP7.06□□□□□ -1.28
TDP1-207ENST00000553617 DDX11L8A8MPP1 907 aa7.05□□□□□ -1.28
TDP1-207ENST00000553617 NUTM1Q86Y26 1132 aa7.05□□□□□ -1.28
TDP1-207ENST00000553617 ZNF330Q9Y3S2 320 aaPredicted RBP7.05□□□□□ -1.28
TDP1-207ENST00000553617 NDUFV2P19404 249 aa7.04□□□□□ -1.28
TDP1-207ENST00000553617 NECTIN2Q92692 538 aa7.04□□□□□ -1.28
TDP1-207ENST00000553617 GDPD2Q9HCC8 539 aa7.04□□□□□ -1.28
TDP1-207ENST00000553617 PNMA3Q9UL41 463 aa7.04□□□□□ -1.28
TDP1-207ENST00000553617 PCDHB15Q9Y5E8 787 aa7.04□□□□□ -1.28
TDP1-207ENST00000553617 PROX2Q3B8N5 592 aa7.03□□□□□ -1.28
TDP1-207ENST00000553617 RTL5Q5HYW3 569 aaPredicted RBP7.03□□□□□ -1.28
TDP1-207ENST00000553617 PRPF38BQ5VTL8 546 aaKnown RBP7.03□□□□□ -1.28
TDP1-207ENST00000553617 AXIN2Q9Y2T1 843 aa7.03□□□□□ -1.28
TDP1-207ENST00000553617 PACS2Q86VP3 889 aa7.02□□□□□ -1.29
TDP1-207ENST00000553617 TRAIPQ9BWF2 469 aa7.02□□□□□ -1.29
TDP1-207ENST00000553617 SMAPO00193 183 aa7.01□□□□□ -1.29
TDP1-207ENST00000553617 USP17L8P0C7I0 530 aa7.01□□□□□ -1.29
TDP1-207ENST00000553617 CSPP1Q1MSJ5 1256 aa7.01□□□□□ -1.29
TDP1-207ENST00000553617 KCNK17Q96T54 332 aa7.01□□□□□ -1.29
TDP1-207ENST00000553617 TBC1D2BQ9UPU7 963 aa7.01□□□□□ -1.29
TDP1-207ENST00000553617 HOXA2O43364 376 aa7□□□□□ -1.29
TDP1-207ENST00000553617 KDM4AO75164 1064 aa7□□□□□ -1.29
TDP1-207ENST00000553617 AP1G2O75843 785 aa7□□□□□ -1.29
TDP1-207ENST00000553617 PSEN2P49810 448 aa7□□□□□ -1.29
TDP1-207ENST00000553617 USP46P62068 366 aa7□□□□□ -1.29
TDP1-207ENST00000553617 CABLES1Q8TDN4 633 aa7□□□□□ -1.29
TDP1-207ENST00000553617 GJD4Q96KN9 370 aaPredicted RBP7□□□□□ -1.29
TDP1-207ENST00000553617 ZBTB7CA1YPR0 619 aa6.99□□□□□ -1.29
TDP1-207ENST00000553617 POM121CA8CG34 1229 aa6.99□□□□□ -1.29
TDP1-207ENST00000553617 ARHGAP33O14559 1287 aa6.99□□□□□ -1.29
TDP1-207ENST00000553617 GCGRP47871 477 aa6.99□□□□□ -1.29
TDP1-207ENST00000553617 RDH13Q8NBN7 331 aa6.99□□□□□ -1.29
TDP1-207ENST00000553617 ZBTB3Q9H5J0 574 aa6.99□□□□□ -1.29
TDP1-207ENST00000553617 GPR37L1O60883 481 aa6.98□□□□□ -1.29
TDP1-207ENST00000553617 ABL2P42684 1182 aa6.98□□□□□ -1.29
TDP1-207ENST00000553617 ADGRD1Q6QNK2 874 aa6.98□□□□□ -1.29
TDP1-207ENST00000553617 WWC1Q8IX03 1113 aa6.98□□□□□ -1.29
TDP1-207ENST00000553617 ZBED2Q9BTP6 218 aa6.98□□□□□ -1.29
TDP1-207ENST00000553617 PRM3Q9NNZ6 103 aa6.98□□□□□ -1.29
TDP1-207ENST00000553617 SLC10A3P09131 477 aa6.97□□□□□ -1.29
TDP1-207ENST00000553617 IRF5Q13568 498 aa6.97□□□□□ -1.29
TDP1-207ENST00000553617 RETREG2Q8NC44 543 aa6.97□□□□□ -1.29
TDP1-207ENST00000553617 GLMNQ92990 594 aa6.97□□□□□ -1.29
TDP1-207ENST00000553617 PCDHGC3Q9UN70 934 aa6.97□□□□□ -1.29
TDP1-207ENST00000553617 NUTM2BA6NNL0 878 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms