RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.96■■■□□ 2.07
PSEN1-207ENST00000553599 ZFYVE9O95405 1425 aa27.95■■■□□ 2.07
PSEN1-207ENST00000553599 RIMS2Q9UQ26 1411 aa27.94■■■□□ 2.06
PSEN1-207ENST00000553599 TONSLQ96HA7 1378 aa27.94■■■□□ 2.06
PSEN1-207ENST00000553599 NEXMIFQ5QGS0 1516 aa27.93■■■□□ 2.06
PSEN1-207ENST00000553599 EID1Q9Y6B2 187 aa27.93■■■□□ 2.06
PSEN1-207ENST00000553599 VGFO15240 615 aaPredicted RBP27.91■■■□□ 2.06
PSEN1-207ENST00000553599 ANKLE2Q86XL3 938 aa27.91■■■□□ 2.06
PSEN1-207ENST00000553599 PPLO60437 1756 aa27.91■■■□□ 2.06
PSEN1-207ENST00000553599 IFT172Q9UG01 1749 aa27.9■■■□□ 2.06
PSEN1-207ENST00000553599 SCAF11Q99590 1463 aaKnown RBP27.89■■■□□ 2.05
PSEN1-207ENST00000553599 TXNDC2Q86VQ3 553 aa27.88■■■□□ 2.05
PSEN1-207ENST00000553599 MYOM2P54296 1465 aa27.88■■■□□ 2.05
PSEN1-207ENST00000553599 L3MBTL2Q969R5 705 aa27.87■■■□□ 2.05
PSEN1-207ENST00000553599 HSPA2P54652 639 aa27.86■■■□□ 2.05
PSEN1-207ENST00000553599 DCAF11Q8TEB1 546 aa27.86■■■□□ 2.05
PSEN1-207ENST00000553599 PPP1R15AO75807 674 aaPredicted RBP27.85■■■□□ 2.05
PSEN1-207ENST00000553599 LTKP29376 864 aa27.84■■■□□ 2.05
PSEN1-207ENST00000553599 POLR1AO95602 1720 aaPredicted RBP27.84■■■□□ 2.05
PSEN1-207ENST00000553599 PLEKHG1Q9ULL1 1385 aa27.82■■■□□ 2.04
PSEN1-207ENST00000553599 MED14O60244 1454 aa27.82■■■□□ 2.04
PSEN1-207ENST00000553599 NRXN1Q9ULB1 1477 aa27.81■■■□□ 2.04
PSEN1-207ENST00000553599 NUTM2DQ5VT03 806 aaPredicted RBP27.77■■■□□ 2.04
PSEN1-207ENST00000553599 KDM2AQ9Y2K7 1162 aa27.77■■■□□ 2.04
PSEN1-207ENST00000553599 ADGRF5Q8IZF2 1346 aa27.76■■■□□ 2.03
PSEN1-207ENST00000553599 NCKAP5LQ9HCH0 1330 aa27.76■■■□□ 2.03
PSEN1-207ENST00000553599 SETBP1Q9Y6X0 1596 aa27.76■■■□□ 2.03
PSEN1-207ENST00000553599 NPHP4O75161 1426 aaPredicted RBP27.75■■■□□ 2.03
PSEN1-207ENST00000553599 PIK3C2GO75747 1445 aa27.75■■■□□ 2.03
PSEN1-207ENST00000553599 STRCQ7RTU9 1775 aa27.75■■■□□ 2.03
PSEN1-207ENST00000553599 PRAG1Q86YV5 1406 aa27.74■■■□□ 2.03
PSEN1-207ENST00000553599 DMRT2Q9Y5R5 561 aa27.73■■■□□ 2.03
PSEN1-207ENST00000553599 IQGAP1P46940 1657 aa27.72■■■□□ 2.03
PSEN1-207ENST00000553599 DIP2AQ14689 1571 aa27.71■■■□□ 2.03
PSEN1-207ENST00000553599 LAMC1P11047 1609 aa27.7■■■□□ 2.02
PSEN1-207ENST00000553599 BCANQ96GW7 911 aa27.69■■■□□ 2.02
PSEN1-207ENST00000553599 NRXN3Q9Y4C0 1643 aa27.68■■■□□ 2.02
PSEN1-207ENST00000553599 ZEB1P37275 1124 aaPredicted RBP27.68■■■□□ 2.02
PSEN1-207ENST00000553599 C14orf93Q9H972 538 aaKnown RBP27.67■■■□□ 2.02
PSEN1-207ENST00000553599 TBX22Q9Y458 520 aa27.67■■■□□ 2.02
PSEN1-207ENST00000553599 KIAA1210Q9ULL0 1709 aa27.67■■■□□ 2.02
PSEN1-207ENST00000553599 ADAMTS13Q76LX8 1427 aa27.67■■■□□ 2.02
PSEN1-207ENST00000553599 ALKQ9UM73 1620 aa27.65■■■□□ 2.02
PSEN1-207ENST00000553599 PIK3R4Q99570 1358 aa27.62■■■□□ 2.01
PSEN1-207ENST00000553599 NBPF8Q3BBV2 869 aa27.61■■■□□ 2.01
PSEN1-207ENST00000553599 CFAP70Q5T0N1 1121 aa27.6■■■□□ 2.01
PSEN1-207ENST00000553599 SLC26A8Q96RN1 970 aa27.6■■■□□ 2.01
PSEN1-207ENST00000553599 SETD1AO15047 1707 aaKnown RBP27.6■■■□□ 2.01
PSEN1-207ENST00000553599 TRPM1Q7Z4N2 1603 aa27.59■■■□□ 2.01
PSEN1-207ENST00000553599 RALGAPBQ86X10 1494 aa27.57■■■□□ 2
PSEN1-207ENST00000553599 SENP3Q9H4L4 574 aaPredicted RBP27.55■■■□□ 2
PSEN1-207ENST00000553599 ADGRB1O14514 1584 aa27.53■■■□□ 2
PSEN1-207ENST00000553599 METP08581 1390 aa27.53■■■□□ 2
PSEN1-207ENST00000553599 GPRASP1Q5JY77 1395 aa27.53■■■□□ 2
PSEN1-207ENST00000553599 ROCK2O75116 1388 aaKnown RBP27.52■■■□□ 2
PSEN1-207ENST00000553599 ASXL1Q8IXJ9 1541 aa27.51■■□□□ 1.99
PSEN1-207ENST00000553599 NBPF1Q3BBV0 1214 aa27.49■■□□□ 1.99
PSEN1-207ENST00000553599 LRPPRCP42704 1394 aaKnown RBP27.48■■□□□ 1.99
PSEN1-207ENST00000553599 CHD2O14647 1828 aaKnown RBP27.48■■□□□ 1.99
PSEN1-207ENST00000553599 KCNA6P17658 529 aa27.48■■□□□ 1.99
PSEN1-207ENST00000553599 YTHDC2Q9H6S0 1430 aaKnown RBP27.48■■□□□ 1.99
PSEN1-207ENST00000553599 TMEM132EQ6IEE7 984 aa27.47■■□□□ 1.99
PSEN1-207ENST00000553599 NWD1Q149M9 1564 aa27.47■■□□□ 1.99
PSEN1-207ENST00000553599 ABCC11Q96J66 1382 aa27.47■■□□□ 1.99
PSEN1-207ENST00000553599 TECPR2O15040 1411 aa27.45■■□□□ 1.98
PSEN1-207ENST00000553599 PTPRUQ92729 1446 aa27.44■■□□□ 1.98
PSEN1-207ENST00000553599 CARD11Q9BXL7 1154 aa27.44■■□□□ 1.98
PSEN1-207ENST00000553599 AMOTL2Q9Y2J4 779 aa27.44■■□□□ 1.98
PSEN1-207ENST00000553599 XRN1Q8IZH2 1706 aaKnown RBP27.44■■□□□ 1.98
PSEN1-207ENST00000553599 SIRT1Q96EB6 747 aa27.43■■□□□ 1.98
PSEN1-207ENST00000553599 KNDC1Q76NI1 1749 aa27.43■■□□□ 1.98
PSEN1-207ENST00000553599 NKTRP30414 1462 aaKnown RBP27.42■■□□□ 1.98
PSEN1-207ENST00000553599 DLC1Q96QB1 1528 aa27.41■■□□□ 1.98
PSEN1-207ENST00000553599 PTCH1Q13635 1447 aa27.41■■□□□ 1.98
PSEN1-207ENST00000553599 CPS1P31327 1500 aa27.4■■□□□ 1.98
PSEN1-207ENST00000553599 STK26Q9P289 416 aa27.38■■□□□ 1.97
PSEN1-207ENST00000553599 FAM135BQ49AJ0 1406 aa27.38■■□□□ 1.97
PSEN1-207ENST00000553599 EIF3AQ14152 1382 aaKnown RBP27.37■■□□□ 1.97
PSEN1-207ENST00000553599 ZNF335Q9H4Z2 1342 aaPredicted RBP27.37■■□□□ 1.97
PSEN1-207ENST00000553599 TRAK1Q9UPV9 953 aa27.35■■□□□ 1.97
PSEN1-207ENST00000553599 STRCP1A6NGW2 1772 aa27.34■■□□□ 1.97
PSEN1-207ENST00000553599 ROBO2Q9HCK4 1378 aa27.33■■□□□ 1.97
PSEN1-207ENST00000553599 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.96
PSEN1-207ENST00000553599 NCOA3Q9Y6Q9 1424 aa27.31■■□□□ 1.96
PSEN1-207ENST00000553599 USP47Q96K76 1375 aa27.3■■□□□ 1.96
PSEN1-207ENST00000553599 PROSER2Q86WR7 435 aaPredicted RBP27.29■■□□□ 1.96
PSEN1-207ENST00000553599 LTBP4Q8N2S1 1624 aa27.29■■□□□ 1.96
PSEN1-207ENST00000553599 POGKQ9P215 609 aa27.28■■□□□ 1.96
PSEN1-207ENST00000553599 CENPJQ9HC77 1338 aaPredicted RBP27.27■■□□□ 1.96
PSEN1-207ENST00000553599 EIF4G2P78344 907 aaKnown RBP eCLIP27.27■■□□□ 1.96
PSEN1-207ENST00000553599 PRAM1Q96QH2 718 aa27.27■■□□□ 1.96
PSEN1-207ENST00000553599 LRRC7Q96NW7 1537 aa27.26■■□□□ 1.95
PSEN1-207ENST00000553599 SLC24A1O60721 1099 aa27.24■■□□□ 1.95
PSEN1-207ENST00000553599 WAPLQ7Z5K2 1190 aa27.23■■□□□ 1.95
PSEN1-207ENST00000553599 TMEM94Q12767 1356 aa27.22■■□□□ 1.95
PSEN1-207ENST00000553599 SBNO2Q9Y2G9 1366 aa27.22■■□□□ 1.95
PSEN1-207ENST00000553599 PLEKHH1Q9ULM0 1364 aa27.22■■□□□ 1.95
PSEN1-207ENST00000553599 ADGRL3Q9HAR2 1447 aa27.19■■□□□ 1.94
PSEN1-207ENST00000553599 ST20-MTHFSA0A0A6YYL1 179 aa27.19■■□□□ 1.94
PSEN1-207ENST00000553599 QRICH2Q9H0J4 1663 aa27.18■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms