RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 E9PCH4 1651 aa23.08■■□□□ 1.29
SDR39U1-205ENST00000553546 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
SDR39U1-205ENST00000553546 NUP155O75694 1391 aa23.04■■□□□ 1.28
SDR39U1-205ENST00000553546 HDGFP51858 240 aaKnown RBP23.04■■□□□ 1.28
SDR39U1-205ENST00000553546 TMEM131LA2VDJ0 1609 aa23.04■■□□□ 1.28
SDR39U1-205ENST00000553546 MYO5BQ9ULV0 1848 aa23.03■■□□□ 1.28
SDR39U1-205ENST00000553546 ZFYVE9O95405 1425 aa23.01■■□□□ 1.27
SDR39U1-205ENST00000553546 SETD1AO15047 1707 aaKnown RBP23.01■■□□□ 1.27
SDR39U1-205ENST00000553546 RIMS2Q9UQ26 1411 aa22.99■■□□□ 1.27
SDR39U1-205ENST00000553546 KCNA6P17658 529 aa22.99■■□□□ 1.27
SDR39U1-205ENST00000553546 PLEKHG1Q9ULL1 1385 aa22.99■■□□□ 1.27
SDR39U1-205ENST00000553546 PPP1R15AO75807 674 aaPredicted RBP22.98■■□□□ 1.27
SDR39U1-205ENST00000553546 BCANQ96GW7 911 aa22.98■■□□□ 1.27
SDR39U1-205ENST00000553546 SLC26A8Q96RN1 970 aa22.98■■□□□ 1.27
SDR39U1-205ENST00000553546 NKTRP30414 1462 aaKnown RBP22.98■■□□□ 1.27
SDR39U1-205ENST00000553546 NWD1Q149M9 1564 aa22.97■■□□□ 1.27
SDR39U1-205ENST00000553546 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.97■■□□□ 1.27
SDR39U1-205ENST00000553546 CHGAP10645 457 aaKnown RBP22.96■■□□□ 1.27
SDR39U1-205ENST00000553546 POTEAQ6S8J7 498 aa22.96■■□□□ 1.27
SDR39U1-205ENST00000553546 TMEM94Q12767 1356 aa22.93■■□□□ 1.26
SDR39U1-205ENST00000553546 SPHKAPQ2M3C7 1700 aa22.93■■□□□ 1.26
SDR39U1-205ENST00000553546 ROBO1Q9Y6N7 1651 aa22.92■■□□□ 1.26
SDR39U1-205ENST00000553546 PROSER2Q86WR7 435 aaPredicted RBP22.91■■□□□ 1.26
SDR39U1-205ENST00000553546 NAIPQ13075 1403 aa22.91■■□□□ 1.26
SDR39U1-205ENST00000553546 FAM135BQ49AJ0 1406 aa22.91■■□□□ 1.26
SDR39U1-205ENST00000553546 DIP2AQ14689 1571 aa22.9■■□□□ 1.26
SDR39U1-205ENST00000553546 CHD2O14647 1828 aaKnown RBP22.89■■□□□ 1.26
SDR39U1-205ENST00000553546 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
SDR39U1-205ENST00000553546 HFM1A2PYH4 1435 aa22.86■■□□□ 1.25
SDR39U1-205ENST00000553546 ADAMTS13Q76LX8 1427 aa22.84■■□□□ 1.25
SDR39U1-205ENST00000553546 MSH6P52701 1360 aa22.84■■□□□ 1.25
SDR39U1-205ENST00000553546 PIK3R4Q99570 1358 aa22.84■■□□□ 1.25
SDR39U1-205ENST00000553546 TRPM2O94759 1503 aa22.82■■□□□ 1.24
SDR39U1-205ENST00000553546 NUTM2DQ5VT03 806 aaPredicted RBP22.81■■□□□ 1.24
SDR39U1-205ENST00000553546 NCOA3Q9Y6Q9 1424 aa22.81■■□□□ 1.24
SDR39U1-205ENST00000553546 RBM33Q96EV2 1170 aaKnown RBP22.79■■□□□ 1.24
SDR39U1-205ENST00000553546 CLTCL1P53675 1640 aa22.79■■□□□ 1.24
SDR39U1-205ENST00000553546 PHLPP1O60346 1717 aa22.78■■□□□ 1.24
SDR39U1-205ENST00000553546 SETBP1Q9Y6X0 1596 aa22.77■■□□□ 1.24
SDR39U1-205ENST00000553546 ZNF326Q5BKZ1 582 aaKnown RBP22.77■■□□□ 1.24
SDR39U1-205ENST00000553546 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
SDR39U1-205ENST00000553546 KIF1BO60333 1816 aa22.77■■□□□ 1.24
SDR39U1-205ENST00000553546 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
SDR39U1-205ENST00000553546 COL16A1Q07092 1604 aaPredicted RBP22.72■■□□□ 1.23
SDR39U1-205ENST00000553546 C14orf37Q86TY3 774 aa22.72■■□□□ 1.23
SDR39U1-205ENST00000553546 NEXMIFQ5QGS0 1516 aa22.72■■□□□ 1.23
SDR39U1-205ENST00000553546 SLC4A1APQ9BWU0 796 aaKnown RBP22.71■■□□□ 1.23
SDR39U1-205ENST00000553546 SLAIN2Q9P270 581 aa22.71■■□□□ 1.23
SDR39U1-205ENST00000553546 AMOTL2Q9Y2J4 779 aa22.7■■□□□ 1.22
SDR39U1-205ENST00000553546 LRP6O75581 1613 aa22.7■■□□□ 1.22
SDR39U1-205ENST00000553546 XRN1Q8IZH2 1706 aaKnown RBP22.69■■□□□ 1.22
SDR39U1-205ENST00000553546 PTPRUQ92729 1446 aa22.69■■□□□ 1.22
SDR39U1-205ENST00000553546 C19orf44Q9H6X5 657 aa22.68■■□□□ 1.22
SDR39U1-205ENST00000553546 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.68■■□□□ 1.22
SDR39U1-205ENST00000553546 JCADQ9P266 1359 aa22.67■■□□□ 1.22
SDR39U1-205ENST00000553546 CADPS2Q86UW7 1296 aa22.67■■□□□ 1.22
SDR39U1-205ENST00000553546 ATF3P18847 181 aa22.65■■□□□ 1.22
SDR39U1-205ENST00000553546 DCCP43146 1447 aa22.65■■□□□ 1.22
SDR39U1-205ENST00000553546 RPGRIP1LQ68CZ1 1315 aa22.63■■□□□ 1.21
SDR39U1-205ENST00000553546 VGFO15240 615 aaPredicted RBP22.63■■□□□ 1.21
SDR39U1-205ENST00000553546 UPF1Q92900 1129 aaKnown RBP eCLIP22.63■■□□□ 1.21
SDR39U1-205ENST00000553546 METP08581 1390 aa22.63■■□□□ 1.21
SDR39U1-205ENST00000553546 ACIN1Q9UKV3 1341 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-205ENST00000553546 SHPRHQ149N8 1683 aa22.59■■□□□ 1.21
SDR39U1-205ENST00000553546 PPLO60437 1756 aa22.58■■□□□ 1.21
SDR39U1-205ENST00000553546 CCDC144AA2RUR9 1427 aa22.57■■□□□ 1.2
SDR39U1-205ENST00000553546 AHDC1Q5TGY3 1603 aaPredicted RBP22.57■■□□□ 1.2
SDR39U1-205ENST00000553546 ADGRL3Q9HAR2 1447 aa22.55■■□□□ 1.2
SDR39U1-205ENST00000553546 MPHOSPH9Q99550 1183 aa22.54■■□□□ 1.2
SDR39U1-205ENST00000553546 PTCH1Q13635 1447 aa22.54■■□□□ 1.2
SDR39U1-205ENST00000553546 FOXD1Q16676 465 aa22.53■■□□□ 1.2
SDR39U1-205ENST00000553546 SPATA31A6Q5VVP1 1343 aa22.53■■□□□ 1.2
SDR39U1-205ENST00000553546 PRAG1Q86YV5 1406 aa22.52■■□□□ 1.2
SDR39U1-205ENST00000553546 MST1RQ04912 1400 aa22.51■■□□□ 1.19
SDR39U1-205ENST00000553546 NALCNQ8IZF0 1738 aa22.51■■□□□ 1.19
SDR39U1-205ENST00000553546 SETD5Q9C0A6 1442 aa22.5■■□□□ 1.19
SDR39U1-205ENST00000553546 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
SDR39U1-205ENST00000553546 ASXL1Q8IXJ9 1541 aa22.49■■□□□ 1.19
SDR39U1-205ENST00000553546 ZNF772Q68DY9 489 aaPredicted RBP22.49■■□□□ 1.19
SDR39U1-205ENST00000553546 SRCAPQ6ZRS2 3230 aa22.49■■□□□ 1.19
SDR39U1-205ENST00000553546 SPATA31E1Q6ZUB1 1445 aa22.48■■□□□ 1.19
SDR39U1-205ENST00000553546 MEX3CQ5U5Q3 659 aaKnown RBP22.48■■□□□ 1.19
SDR39U1-205ENST00000553546 ANKRD30BQ9BXX2 1392 aa22.48■■□□□ 1.19
SDR39U1-205ENST00000553546 CDK12Q9NYV4 1490 aaPredicted RBP22.47■■□□□ 1.19
SDR39U1-205ENST00000553546 IFT172Q9UG01 1749 aa22.46■■□□□ 1.19
SDR39U1-205ENST00000553546 NHSL1Q5SYE7 1610 aa22.45■■□□□ 1.18
SDR39U1-205ENST00000553546 ROBO2Q9HCK4 1378 aa22.44■■□□□ 1.18
SDR39U1-205ENST00000553546 RGL3Q3MIN7 710 aa22.43■■□□□ 1.18
SDR39U1-205ENST00000553546 ADGRF5Q8IZF2 1346 aa22.41■■□□□ 1.18
SDR39U1-205ENST00000553546 RAB3GAP2Q9H2M9 1393 aa22.4■■□□□ 1.18
SDR39U1-205ENST00000553546 RXRBP28702 533 aa22.4■■□□□ 1.18
SDR39U1-205ENST00000553546 C1orf167Q5SNV9 1468 aa22.4■■□□□ 1.18
SDR39U1-205ENST00000553546 RGS12O14924 1447 aa22.4■■□□□ 1.18
SDR39U1-205ENST00000553546 PIK3C2GO75747 1445 aa22.38■■□□□ 1.17
SDR39U1-205ENST00000553546 LRRC59Q96AG4 307 aaKnown RBP22.37■■□□□ 1.17
SDR39U1-205ENST00000553546 TECPR2O15040 1411 aa22.37■■□□□ 1.17
SDR39U1-205ENST00000553546 CDC42BPGQ6DT37 1551 aa22.36■■□□□ 1.17
SDR39U1-205ENST00000553546 KNDC1Q76NI1 1749 aa22.36■■□□□ 1.17
SDR39U1-205ENST00000553546 LAMC1P11047 1609 aa22.35■■□□□ 1.17
SDR39U1-205ENST00000553546 AFF2P51816 1311 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms