RNA–Protein interactions for RNA: ENST00000553509.1

ATL1-203, Transcript of atlastin GTPase 1, humanhuman

TSL 4

Gene ATL1, Length 527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-203ENST00000553509 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
ATL1-203ENST00000553509 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
ATL1-203ENST00000553509 RIMS2Q9UQ26 1411 aa19.58■□□□□ 0.72
ATL1-203ENST00000553509 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.57■□□□□ 0.72
ATL1-203ENST00000553509 ZFYVE9O95405 1425 aa19.57■□□□□ 0.72
ATL1-203ENST00000553509 POTEDQ86YR6 584 aa19.56■□□□□ 0.72
ATL1-203ENST00000553509 ZNF326Q5BKZ1 582 aaKnown RBP19.54■□□□□ 0.72
ATL1-203ENST00000553509 PPP1R15AO75807 674 aaPredicted RBP19.53■□□□□ 0.72
ATL1-203ENST00000553509 LTKP29376 864 aa19.53■□□□□ 0.72
ATL1-203ENST00000553509 ANKRD30BQ9BXX2 1392 aa19.53■□□□□ 0.72
ATL1-203ENST00000553509 PPLO60437 1756 aa19.52■□□□□ 0.72
ATL1-203ENST00000553509 NEXMIFQ5QGS0 1516 aa19.51■□□□□ 0.71
ATL1-203ENST00000553509 PLEKHG1Q9ULL1 1385 aa19.51■□□□□ 0.71
ATL1-203ENST00000553509 FBXO41Q8TF61 875 aa19.5■□□□□ 0.71
ATL1-203ENST00000553509 RPGRIP1LQ68CZ1 1315 aa19.5■□□□□ 0.71
ATL1-203ENST00000553509 IFT172Q9UG01 1749 aa19.49■□□□□ 0.71
ATL1-203ENST00000553509 SPATA31E1Q6ZUB1 1445 aa19.49■□□□□ 0.71
ATL1-203ENST00000553509 DIP2AQ14689 1571 aa19.49■□□□□ 0.71
ATL1-203ENST00000553509 BCANQ96GW7 911 aa19.46■□□□□ 0.71
ATL1-203ENST00000553509 PCGF6Q9BYE7 350 aa19.46■□□□□ 0.71
ATL1-203ENST00000553509 SETBP1Q9Y6X0 1596 aa19.44■□□□□ 0.7
ATL1-203ENST00000553509 VGFO15240 615 aaPredicted RBP19.44■□□□□ 0.7
ATL1-203ENST00000553509 DHX57Q6P158 1386 aaKnown RBP19.44■□□□□ 0.7
ATL1-203ENST00000553509 CPS1P31327 1500 aa19.43■□□□□ 0.7
ATL1-203ENST00000553509 NUTM2DQ5VT03 806 aaPredicted RBP19.42■□□□□ 0.7
ATL1-203ENST00000553509 LTBP4Q8N2S1 1624 aa19.42■□□□□ 0.7
ATL1-203ENST00000553509 NRXN3Q9Y4C0 1643 aa19.41■□□□□ 0.7
ATL1-203ENST00000553509 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
ATL1-203ENST00000553509 ZNF335Q9H4Z2 1342 aaPredicted RBP19.41■□□□□ 0.7
ATL1-203ENST00000553509 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
ATL1-203ENST00000553509 TBX22Q9Y458 520 aa19.39■□□□□ 0.69
ATL1-203ENST00000553509 STRCP1A6NGW2 1772 aa19.38■□□□□ 0.69
ATL1-203ENST00000553509 MYOM2P54296 1465 aa19.38■□□□□ 0.69
ATL1-203ENST00000553509 ADAMTS13Q76LX8 1427 aa19.38■□□□□ 0.69
ATL1-203ENST00000553509 SLC26A8Q96RN1 970 aa19.38■□□□□ 0.69
ATL1-203ENST00000553509 PIK3R4Q99570 1358 aa19.38■□□□□ 0.69
ATL1-203ENST00000553509 NWD1Q149M9 1564 aa19.37■□□□□ 0.69
ATL1-203ENST00000553509 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
ATL1-203ENST00000553509 STAC3Q96MF2 364 aa19.36■□□□□ 0.69
ATL1-203ENST00000553509 LAMC1P11047 1609 aa19.36■□□□□ 0.69
ATL1-203ENST00000553509 NKTRP30414 1462 aaKnown RBP19.35■□□□□ 0.69
ATL1-203ENST00000553509 SETD1AO15047 1707 aaKnown RBP19.34■□□□□ 0.69
ATL1-203ENST00000553509 ALKQ9UM73 1620 aa19.33■□□□□ 0.69
ATL1-203ENST00000553509 CERKQ8TCT0 537 aa19.33■□□□□ 0.68
ATL1-203ENST00000553509 KCNA6P17658 529 aa19.32■□□□□ 0.68
ATL1-203ENST00000553509 NRXN1Q9ULB1 1477 aa19.31■□□□□ 0.68
ATL1-203ENST00000553509 PIK3C2GO75747 1445 aa19.31■□□□□ 0.68
ATL1-203ENST00000553509 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
ATL1-203ENST00000553509 XRN1Q8IZH2 1706 aaKnown RBP19.29■□□□□ 0.68
ATL1-203ENST00000553509 MSH5O43196 834 aa19.29■□□□□ 0.68
ATL1-203ENST00000553509 DCAF11Q8TEB1 546 aa19.28■□□□□ 0.68
ATL1-203ENST00000553509 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
ATL1-203ENST00000553509 XIRP1Q702N8 1843 aaKnown RBP19.27■□□□□ 0.68
ATL1-203ENST00000553509 CLSPNQ9HAW4 1339 aa19.25■□□□□ 0.67
ATL1-203ENST00000553509 METP08581 1390 aa19.25■□□□□ 0.67
ATL1-203ENST00000553509 NEUROD1Q13562 356 aa19.24■□□□□ 0.67
ATL1-203ENST00000553509 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
ATL1-203ENST00000553509 KDM2AQ9Y2K7 1162 aa19.24■□□□□ 0.67
ATL1-203ENST00000553509 KIAA1210Q9ULL0 1709 aa19.24■□□□□ 0.67
ATL1-203ENST00000553509 KNDC1Q76NI1 1749 aa19.23■□□□□ 0.67
ATL1-203ENST00000553509 PROSER2Q86WR7 435 aaPredicted RBP19.23■□□□□ 0.67
ATL1-203ENST00000553509 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
ATL1-203ENST00000553509 PRAG1Q86YV5 1406 aa19.23■□□□□ 0.67
ATL1-203ENST00000553509 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
ATL1-203ENST00000553509 NCOA3Q9Y6Q9 1424 aa19.22■□□□□ 0.67
ATL1-203ENST00000553509 C14orf93Q9H972 538 aaKnown RBP19.21■□□□□ 0.67
ATL1-203ENST00000553509 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
ATL1-203ENST00000553509 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
ATL1-203ENST00000553509 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
ATL1-203ENST00000553509 ASXL1Q8IXJ9 1541 aa19.19■□□□□ 0.66
ATL1-203ENST00000553509 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
ATL1-203ENST00000553509 L3MBTL2Q969R5 705 aa19.17■□□□□ 0.66
ATL1-203ENST00000553509 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
ATL1-203ENST00000553509 CCER1Q8TC90 406 aaPredicted RBP19.16■□□□□ 0.66
ATL1-203ENST00000553509 MSH6P52701 1360 aa19.16■□□□□ 0.66
ATL1-203ENST00000553509 TECPR2O15040 1411 aa19.16■□□□□ 0.66
ATL1-203ENST00000553509 YTHDC2Q9H6S0 1430 aaKnown RBP19.16■□□□□ 0.66
ATL1-203ENST00000553509 ADGRB1O14514 1584 aa19.15■□□□□ 0.66
ATL1-203ENST00000553509 TOM1O60784 492 aa19.14■□□□□ 0.65
ATL1-203ENST00000553509 C14orf37Q86TY3 774 aa19.14■□□□□ 0.65
ATL1-203ENST00000553509 ABCC11Q96J66 1382 aa19.14■□□□□ 0.65
ATL1-203ENST00000553509 UBAP1LF5GYI3 381 aa19.13■□□□□ 0.65
ATL1-203ENST00000553509 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.13■□□□□ 0.65
ATL1-203ENST00000553509 NALCNQ8IZF0 1738 aa19.12■□□□□ 0.65
ATL1-203ENST00000553509 TRPM1Q7Z4N2 1603 aa19.12■□□□□ 0.65
ATL1-203ENST00000553509 TMEM132EQ6IEE7 984 aa19.12■□□□□ 0.65
ATL1-203ENST00000553509 DLC1Q96QB1 1528 aa19.11■□□□□ 0.65
ATL1-203ENST00000553509 DCCP43146 1447 aa19.11■□□□□ 0.65
ATL1-203ENST00000553509 ROBO2Q9HCK4 1378 aa19.11■□□□□ 0.65
ATL1-203ENST00000553509 FAM135BQ49AJ0 1406 aa19.1■□□□□ 0.65
ATL1-203ENST00000553509 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
ATL1-203ENST00000553509 STK26Q9P289 416 aa19.1■□□□□ 0.65
ATL1-203ENST00000553509 C19orf44Q9H6X5 657 aa19.09■□□□□ 0.65
ATL1-203ENST00000553509 TIMELESSQ9UNS1 1208 aa19.09■□□□□ 0.65
ATL1-203ENST00000553509 SIRT1Q96EB6 747 aa19.08■□□□□ 0.64
ATL1-203ENST00000553509 RBM33Q96EV2 1170 aaKnown RBP19.08■□□□□ 0.64
ATL1-203ENST00000553509 ARHGEF28Q8N1W1 1705 aaKnown RBP19.08■□□□□ 0.64
ATL1-203ENST00000553509 ATF3P18847 181 aa19.06■□□□□ 0.64
ATL1-203ENST00000553509 CADPS2Q86UW7 1296 aa19.06■□□□□ 0.64
ATL1-203ENST00000553509 CDC42BPGQ6DT37 1551 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms