RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.43■■□□□ 1.022e-10■■□□□ 11.8
ABCD4-218ENST00000553486 IQGAP1P46940 1657 aa21.43■■□□□ 1.02
ABCD4-218ENST00000553486 ILDR2Q71H61 639 aa21.43■■□□□ 1.02
ABCD4-218ENST00000553486 KANK1Q14678 1352 aa21.41■■□□□ 1.02
ABCD4-218ENST00000553486 TOM1O60784 492 aa21.41■■□□□ 1.02
ABCD4-218ENST00000553486 UBR1Q8IWV7 1749 aa21.4■■□□□ 1.02
ABCD4-218ENST00000553486 WASHC2AQ641Q2 1341 aa21.39■■□□□ 1.01
ABCD4-218ENST00000553486 CCDC144AA2RUR9 1427 aa21.39■■□□□ 1.01
ABCD4-218ENST00000553486 SPATA31E1Q6ZUB1 1445 aa21.39■■□□□ 1.01
ABCD4-218ENST00000553486 SCAF11Q99590 1463 aaKnown RBP21.39■■□□□ 1.01
ABCD4-218ENST00000553486 CCER2I3L3R5 266 aa21.38■■□□□ 1.01
ABCD4-218ENST00000553486 ARHGAP23Q9P227 1491 aa21.38■■□□□ 1.01
ABCD4-218ENST00000553486 CFAP65Q6ZU64 1925 aaKnown RBP21.37■■□□□ 1.01
ABCD4-218ENST00000553486 SLIT1O75093 1534 aa21.37■■□□□ 1.01
ABCD4-218ENST00000553486 PIP4K2BP78356 416 aa21.37■■□□□ 1.01
ABCD4-218ENST00000553486 LMTK2Q8IWU2 1503 aa21.37■■□□□ 1.01
ABCD4-218ENST00000553486 LTKP29376 864 aa21.36■■□□□ 1.01
ABCD4-218ENST00000553486 ZNF326Q5BKZ1 582 aaKnown RBP21.35■■□□□ 1.01
ABCD4-218ENST00000553486 TXNDC2Q86VQ3 553 aa21.34■■□□□ 1.01
ABCD4-218ENST00000553486 GTF3C3Q9Y5Q9 886 aa21.34■■□□□ 1.01
ABCD4-218ENST00000553486 RALGAPBQ86X10 1494 aa21.34■■□□□ 1.01
ABCD4-218ENST00000553486 HSPA1LP34931 641 aa21.34■■□□□ 1.01
ABCD4-218ENST00000553486 CCDC7Q96M83 1385 aa21.33■■□□□ 1.01
ABCD4-218ENST00000553486 LRRC7Q96NW7 1537 aa21.33■■□□□ 1
ABCD4-218ENST00000553486 EID1Q9Y6B2 187 aa21.32■■□□□ 1
ABCD4-218ENST00000553486 TMEM2Q9UHN6 1383 aa21.31■■□□□ 1
ABCD4-218ENST00000553486 PIK3C2BO00750 1634 aa21.31■■□□□ 1
ABCD4-218ENST00000553486 DCAF11Q8TEB1 546 aa21.31■■□□□ 1
ABCD4-218ENST00000553486 STRCP1A6NGW2 1772 aa21.31■■□□□ 1
ABCD4-218ENST00000553486 ALKQ9UM73 1620 aa21.31■■□□□ 1
ABCD4-218ENST00000553486 SOCS7O14512 581 aa21.3■■□□□ 1
ABCD4-218ENST00000553486 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
ABCD4-218ENST00000553486 USP47Q96K76 1375 aa21.3■■□□□ 1
ABCD4-218ENST00000553486 SYNMO15061 1565 aa21.3■■□□□ 1
ABCD4-218ENST00000553486 EFCAB6Q5THR3 1501 aa21.3■■□□□ 1
ABCD4-218ENST00000553486 IDI1Q13907 227 aa21.29■■□□□ 1
ABCD4-218ENST00000553486 KDM2AQ9Y2K7 1162 aa21.29■■□□□ 1
ABCD4-218ENST00000553486 C11orf95C9JLR9 678 aaPredicted RBP21.28■■□□□ 1
ABCD4-218ENST00000553486 NOS1P29475 1434 aa21.28■■□□□ 1
ABCD4-218ENST00000553486 KDM5AP29375 1690 aaKnown RBP21.27■□□□□ 0.99
ABCD4-218ENST00000553486 E9PCH4 1651 aa21.26■□□□□ 0.99
ABCD4-218ENST00000553486 CARD11Q9BXL7 1154 aa21.25■□□□□ 0.99
ABCD4-218ENST00000553486 TET3O43151 1660 aa21.25■□□□□ 0.99
ABCD4-218ENST00000553486 KIF7Q2M1P5 1343 aa21.24■□□□□ 0.99
ABCD4-218ENST00000553486 SLC52A1Q9NWF4 448 aa21.23■□□□□ 0.99
ABCD4-218ENST00000553486 PRAG1Q86YV5 1406 aa21.22■□□□□ 0.99
ABCD4-218ENST00000553486 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
ABCD4-218ENST00000553486 RGL3Q3MIN7 710 aa21.22■□□□□ 0.99
ABCD4-218ENST00000553486 ADGRB3O60242 1522 aa21.21■□□□□ 0.99
ABCD4-218ENST00000553486 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
ABCD4-218ENST00000553486 TRPM2O94759 1503 aa21.2■□□□□ 0.98
ABCD4-218ENST00000553486 ROCK2O75116 1388 aaKnown RBP21.19■□□□□ 0.98
ABCD4-218ENST00000553486 MED1Q15648 1581 aaPredicted RBP21.19■□□□□ 0.98
ABCD4-218ENST00000553486 SLC26A8Q96RN1 970 aa21.16■□□□□ 0.98
ABCD4-218ENST00000553486 LAMC1P11047 1609 aa21.15■□□□□ 0.98
ABCD4-218ENST00000553486 KCNA6P17658 529 aa21.14■□□□□ 0.97
ABCD4-218ENST00000553486 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
ABCD4-218ENST00000553486 TMEM94Q12767 1356 aa21.13■□□□□ 0.97
ABCD4-218ENST00000553486 GPRASP1Q5JY77 1395 aa21.13■□□□□ 0.97
ABCD4-218ENST00000553486 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
ABCD4-218ENST00000553486 STAC3Q96MF2 364 aa21.12■□□□□ 0.97
ABCD4-218ENST00000553486 XIRP1Q702N8 1843 aaKnown RBP21.12■□□□□ 0.97
ABCD4-218ENST00000553486 CLTCL1P53675 1640 aa21.11■□□□□ 0.97
ABCD4-218ENST00000553486 ST20-MTHFSA0A0A6YYL1 179 aa21.11■□□□□ 0.97
ABCD4-218ENST00000553486 PRKRIP1Q9H875 184 aaPredicted RBP21.1■□□□□ 0.97
ABCD4-218ENST00000553486 BCANQ96GW7 911 aa21.09■□□□□ 0.97
ABCD4-218ENST00000553486 NKTRP30414 1462 aaKnown RBP21.09■□□□□ 0.97
ABCD4-218ENST00000553486 PLEKHG1Q9ULL1 1385 aa21.08■□□□□ 0.97
ABCD4-218ENST00000553486 RIMS2Q9UQ26 1411 aa21.08■□□□□ 0.96
ABCD4-218ENST00000553486 PROSER2Q86WR7 435 aaPredicted RBP21.08■□□□□ 0.96
ABCD4-218ENST00000553486 TMEM131LA2VDJ0 1609 aa21.08■□□□□ 0.96
ABCD4-218ENST00000553486 NWD1Q149M9 1564 aa21.07■□□□□ 0.96
ABCD4-218ENST00000553486 HDGFP51858 240 aaKnown RBP21.07■□□□□ 0.96
ABCD4-218ENST00000553486 POLR3GLQ9BT43 218 aa21.07■□□□□ 0.96
ABCD4-218ENST00000553486 FAM135BQ49AJ0 1406 aa21.07■□□□□ 0.96
ABCD4-218ENST00000553486 NBPF1Q3BBV0 1214 aa21.06■□□□□ 0.96
ABCD4-218ENST00000553486 RBM33Q96EV2 1170 aaKnown RBP21.06■□□□□ 0.96
ABCD4-218ENST00000553486 PHF23Q9BUL5 403 aaPredicted RBP21.05■□□□□ 0.96
ABCD4-218ENST00000553486 KIF1BO60333 1816 aa21.04■□□□□ 0.96
ABCD4-218ENST00000553486 CHGAP10645 457 aaKnown RBP21.03■□□□□ 0.96
ABCD4-218ENST00000553486 MYO5BQ9ULV0 1848 aa21.03■□□□□ 0.96
ABCD4-218ENST00000553486 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.02■□□□□ 0.96
ABCD4-218ENST00000553486 TBX22Q9Y458 520 aa21■□□□□ 0.95
ABCD4-218ENST00000553486 MSH6P52701 1360 aa21■□□□□ 0.95
ABCD4-218ENST00000553486 NUTM2DQ5VT03 806 aaPredicted RBP20.97■□□□□ 0.95
ABCD4-218ENST00000553486 ADAMTS13Q76LX8 1427 aa20.97■□□□□ 0.95
ABCD4-218ENST00000553486 KIAA1210Q9ULL0 1709 aa20.97■□□□□ 0.95
ABCD4-218ENST00000553486 ROBO1Q9Y6N7 1651 aa20.96■□□□□ 0.95
ABCD4-218ENST00000553486 CHD2O14647 1828 aaKnown RBP20.95■□□□□ 0.94
ABCD4-218ENST00000553486 MRS2Q9HD23 443 aa20.95■□□□□ 0.94
ABCD4-218ENST00000553486 SLAIN2Q9P270 581 aa20.94■□□□□ 0.94
ABCD4-218ENST00000553486 DIP2AQ14689 1571 aa20.94■□□□□ 0.94
ABCD4-218ENST00000553486 MYOM2P54296 1465 aa20.93■□□□□ 0.94
ABCD4-218ENST00000553486 PIK3R4Q99570 1358 aa20.93■□□□□ 0.94
ABCD4-218ENST00000553486 NCOA3Q9Y6Q9 1424 aa20.93■□□□□ 0.94
ABCD4-218ENST00000553486 TESK2Q96S53 571 aa20.92■□□□□ 0.94
ABCD4-218ENST00000553486 IFT172Q9UG01 1749 aa20.92■□□□□ 0.94
ABCD4-218ENST00000553486 CCDC184Q52MB2 194 aa20.92■□□□□ 0.94
ABCD4-218ENST00000553486 TMF1P82094 1093 aa20.91■□□□□ 0.94
ABCD4-218ENST00000553486 HNRNPUQ00839 825 aaKnown RBP eCLIP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms