RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 CHGAP10645 457 aaKnown RBP21.71■■□□□ 1.07
MTHFD1-204ENST00000553405 STAG3Q9UJ98 1225 aa21.71■■□□□ 1.07
MTHFD1-204ENST00000553405 CLSPNQ9HAW4 1339 aa21.69■■□□□ 1.06
MTHFD1-204ENST00000553405 NCKAP5LQ9HCH0 1330 aa21.68■■□□□ 1.06
MTHFD1-204ENST00000553405 RPGRIP1LQ68CZ1 1315 aa21.67■■□□□ 1.06
MTHFD1-204ENST00000553405 TXNDC2Q86VQ3 553 aa21.66■■□□□ 1.06
MTHFD1-204ENST00000553405 ANKLE2Q86XL3 938 aa21.66■■□□□ 1.06
MTHFD1-204ENST00000553405 NRXN3Q9Y4C0 1643 aa21.66■■□□□ 1.06
MTHFD1-204ENST00000553405 NRXN1Q9ULB1 1477 aa21.64■■□□□ 1.06
MTHFD1-204ENST00000553405 RGL3Q3MIN7 710 aa21.64■■□□□ 1.05
MTHFD1-204ENST00000553405 MYOM2P54296 1465 aa21.64■■□□□ 1.05
MTHFD1-204ENST00000553405 NPHP4O75161 1426 aaPredicted RBP21.63■■□□□ 1.05
MTHFD1-204ENST00000553405 PLEKHG1Q9ULL1 1385 aa21.63■■□□□ 1.05
MTHFD1-204ENST00000553405 IQGAP1P46940 1657 aa21.63■■□□□ 1.05
MTHFD1-204ENST00000553405 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
MTHFD1-204ENST00000553405 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
MTHFD1-204ENST00000553405 NUTM2DQ5VT03 806 aaPredicted RBP21.61■■□□□ 1.05
MTHFD1-204ENST00000553405 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.61■■□□□ 1.05
MTHFD1-204ENST00000553405 EID1Q9Y6B2 187 aa21.61■■□□□ 1.05
MTHFD1-204ENST00000553405 ADAMTS13Q76LX8 1427 aa21.61■■□□□ 1.05
MTHFD1-204ENST00000553405 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
MTHFD1-204ENST00000553405 CCER1Q8TC90 406 aaPredicted RBP21.59■■□□□ 1.05
MTHFD1-204ENST00000553405 SETD1AO15047 1707 aaKnown RBP21.58■■□□□ 1.05
MTHFD1-204ENST00000553405 NEUROD1Q13562 356 aa21.58■■□□□ 1.05
MTHFD1-204ENST00000553405 PIK3C2GO75747 1445 aa21.57■■□□□ 1.04
MTHFD1-204ENST00000553405 L3MBTL2Q969R5 705 aa21.57■■□□□ 1.04
MTHFD1-204ENST00000553405 VGFO15240 615 aaPredicted RBP21.56■■□□□ 1.04
MTHFD1-204ENST00000553405 HDGFP51858 240 aaKnown RBP21.56■■□□□ 1.04
MTHFD1-204ENST00000553405 DIP2AQ14689 1571 aa21.53■■□□□ 1.04
MTHFD1-204ENST00000553405 PPP1R15AO75807 674 aaPredicted RBP21.53■■□□□ 1.04
MTHFD1-204ENST00000553405 ALKQ9UM73 1620 aa21.52■■□□□ 1.04
MTHFD1-204ENST00000553405 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
MTHFD1-204ENST00000553405 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
MTHFD1-204ENST00000553405 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
MTHFD1-204ENST00000553405 PRAG1Q86YV5 1406 aa21.51■■□□□ 1.03
MTHFD1-204ENST00000553405 ASXL1Q8IXJ9 1541 aa21.5■■□□□ 1.03
MTHFD1-204ENST00000553405 SLC26A8Q96RN1 970 aa21.49■■□□□ 1.03
MTHFD1-204ENST00000553405 TBX22Q9Y458 520 aa21.49■■□□□ 1.03
MTHFD1-204ENST00000553405 STRCP1A6NGW2 1772 aa21.48■■□□□ 1.03
MTHFD1-204ENST00000553405 TONSLQ96HA7 1378 aa21.48■■□□□ 1.03
MTHFD1-204ENST00000553405 SENP3Q9H4L4 574 aaPredicted RBP21.47■■□□□ 1.03
MTHFD1-204ENST00000553405 METP08581 1390 aa21.47■■□□□ 1.03
MTHFD1-204ENST00000553405 NWD1Q149M9 1564 aa21.46■■□□□ 1.03
MTHFD1-204ENST00000553405 C14orf93Q9H972 538 aaKnown RBP21.46■■□□□ 1.03
MTHFD1-204ENST00000553405 KDM2AQ9Y2K7 1162 aa21.46■■□□□ 1.03
MTHFD1-204ENST00000553405 LAMC1P11047 1609 aa21.46■■□□□ 1.03
MTHFD1-204ENST00000553405 PTPRUQ92729 1446 aa21.46■■□□□ 1.03
MTHFD1-204ENST00000553405 ADGRB1O14514 1584 aa21.45■■□□□ 1.02
MTHFD1-204ENST00000553405 TIMELESSQ9UNS1 1208 aa21.45■■□□□ 1.02
MTHFD1-204ENST00000553405 CHD2O14647 1828 aaKnown RBP21.45■■□□□ 1.02
MTHFD1-204ENST00000553405 LTBP4Q8N2S1 1624 aa21.44■■□□□ 1.02
MTHFD1-204ENST00000553405 KIAA1210Q9ULL0 1709 aa21.44■■□□□ 1.02
MTHFD1-204ENST00000553405 PIK3R4Q99570 1358 aa21.44■■□□□ 1.02
MTHFD1-204ENST00000553405 XRN1Q8IZH2 1706 aaKnown RBP21.43■■□□□ 1.02
MTHFD1-204ENST00000553405 NBPF8Q3BBV2 869 aa21.43■■□□□ 1.02
MTHFD1-204ENST00000553405 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
MTHFD1-204ENST00000553405 ZNF335Q9H4Z2 1342 aaPredicted RBP21.42■■□□□ 1.02
MTHFD1-204ENST00000553405 TRPM1Q7Z4N2 1603 aa21.41■■□□□ 1.02
MTHFD1-204ENST00000553405 BCANQ96GW7 911 aa21.38■■□□□ 1.01
MTHFD1-204ENST00000553405 KCNA6P17658 529 aa21.37■■□□□ 1.01
MTHFD1-204ENST00000553405 TECPR2O15040 1411 aa21.36■■□□□ 1.01
MTHFD1-204ENST00000553405 NKTRP30414 1462 aaKnown RBP21.35■■□□□ 1.01
MTHFD1-204ENST00000553405 RALGAPBQ86X10 1494 aa21.35■■□□□ 1.01
MTHFD1-204ENST00000553405 TMEM132EQ6IEE7 984 aa21.35■■□□□ 1.01
MTHFD1-204ENST00000553405 KNDC1Q76NI1 1749 aa21.35■■□□□ 1.01
MTHFD1-204ENST00000553405 LRPPRCP42704 1394 aaKnown RBP21.35■■□□□ 1.01
MTHFD1-204ENST00000553405 NBPF1Q3BBV0 1214 aa21.34■■□□□ 1.01
MTHFD1-204ENST00000553405 YTHDC2Q9H6S0 1430 aaKnown RBP21.34■■□□□ 1.01
MTHFD1-204ENST00000553405 GPRASP1Q5JY77 1395 aa21.34■■□□□ 1.01
MTHFD1-204ENST00000553405 CPS1P31327 1500 aa21.33■■□□□ 1
MTHFD1-204ENST00000553405 PTCH1Q13635 1447 aa21.32■■□□□ 1
MTHFD1-204ENST00000553405 AMOTL2Q9Y2J4 779 aa21.32■■□□□ 1
MTHFD1-204ENST00000553405 LRRC7Q96NW7 1537 aa21.32■■□□□ 1
MTHFD1-204ENST00000553405 ABCC11Q96J66 1382 aa21.32■■□□□ 1
MTHFD1-204ENST00000553405 XIRP1Q702N8 1843 aaKnown RBP21.32■■□□□ 1
MTHFD1-204ENST00000553405 ROBO2Q9HCK4 1378 aa21.3■■□□□ 1
MTHFD1-204ENST00000553405 DLC1Q96QB1 1528 aa21.29■■□□□ 1
MTHFD1-204ENST00000553405 ARHGEF28Q8N1W1 1705 aaKnown RBP21.26■□□□□ 0.99
MTHFD1-204ENST00000553405 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
MTHFD1-204ENST00000553405 SIRT1Q96EB6 747 aa21.24■□□□□ 0.99
MTHFD1-204ENST00000553405 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
MTHFD1-204ENST00000553405 TMEM94Q12767 1356 aa21.23■□□□□ 0.99
MTHFD1-204ENST00000553405 PLEKHH1Q9ULM0 1364 aa21.23■□□□□ 0.99
MTHFD1-204ENST00000553405 STK26Q9P289 416 aa21.22■□□□□ 0.99
MTHFD1-204ENST00000553405 NCOA3Q9Y6Q9 1424 aa21.21■□□□□ 0.99
MTHFD1-204ENST00000553405 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.21■□□□□ 0.99
MTHFD1-204ENST00000553405 IQSEC2Q5JU85 1478 aa21.2■□□□□ 0.98
MTHFD1-204ENST00000553405 NALCNQ8IZF0 1738 aa21.2■□□□□ 0.98
MTHFD1-204ENST00000553405 PROSER2Q86WR7 435 aaPredicted RBP21.19■□□□□ 0.98
MTHFD1-204ENST00000553405 RBM33Q96EV2 1170 aaKnown RBP21.19■□□□□ 0.98
MTHFD1-204ENST00000553405 WAPLQ7Z5K2 1190 aa21.18■□□□□ 0.98
MTHFD1-204ENST00000553405 TRAK1Q9UPV9 953 aa21.18■□□□□ 0.98
MTHFD1-204ENST00000553405 ADGRL3Q9HAR2 1447 aa21.17■□□□□ 0.98
MTHFD1-204ENST00000553405 CERKQ8TCT0 537 aa21.16■□□□□ 0.98
MTHFD1-204ENST00000553405 PRAM1Q96QH2 718 aa21.15■□□□□ 0.98
MTHFD1-204ENST00000553405 CARD11Q9BXL7 1154 aa21.15■□□□□ 0.98
MTHFD1-204ENST00000553405 ADGRB2O60241 1585 aa21.14■□□□□ 0.98
MTHFD1-204ENST00000553405 CDC42BPGQ6DT37 1551 aa21.11■□□□□ 0.97
MTHFD1-204ENST00000553405 DCCP43146 1447 aa21.11■□□□□ 0.97
MTHFD1-204ENST00000553405 QRICH2Q9H0J4 1663 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms