RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-218ENST00000553099 TMF1P82094 1093 aa12.45□□□□□ -0.42
RAB3IP-218ENST00000553099 CFAP70Q5T0N1 1121 aa12.44□□□□□ -0.42
RAB3IP-218ENST00000553099 MYOM2P54296 1465 aa12.44□□□□□ -0.42
RAB3IP-218ENST00000553099 NOS1P29475 1434 aa12.44□□□□□ -0.42
RAB3IP-218ENST00000553099 KIAA1210Q9ULL0 1709 aa12.43□□□□□ -0.42
RAB3IP-218ENST00000553099 SCAF11Q99590 1463 aaKnown RBP12.43□□□□□ -0.42
RAB3IP-218ENST00000553099 PPLO60437 1756 aa12.42□□□□□ -0.42
RAB3IP-218ENST00000553099 SYNMO15061 1565 aa12.41□□□□□ -0.42
RAB3IP-218ENST00000553099 EIF3AQ14152 1382 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-218ENST00000553099 NUTM2DQ5VT03 806 aaPredicted RBP12.4□□□□□ -0.42
RAB3IP-218ENST00000553099 MLECQ14165 292 aa12.39□□□□□ -0.43
RAB3IP-218ENST00000553099 PREX1Q8TCU6 1659 aa12.39□□□□□ -0.43
RAB3IP-218ENST00000553099 PIK3C2BO00750 1634 aa12.39□□□□□ -0.43
RAB3IP-218ENST00000553099 MYO5BQ9ULV0 1848 aa12.39□□□□□ -0.43
RAB3IP-218ENST00000553099 ARHGAP31Q2M1Z3 1444 aa12.38□□□□□ -0.43
RAB3IP-218ENST00000553099 PANK3Q9H999 370 aa12.37□□□□□ -0.43
RAB3IP-218ENST00000553099 IDI1Q13907 227 aa12.37□□□□□ -0.43
RAB3IP-218ENST00000553099 TMC1Q8TDI8 760 aa12.37□□□□□ -0.43
RAB3IP-218ENST00000553099 NRXN1Q9ULB1 1477 aa12.37□□□□□ -0.43
RAB3IP-218ENST00000553099 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
RAB3IP-218ENST00000553099 CLTCQ00610 1675 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-218ENST00000553099 CC2D1BQ5T0F9 858 aaKnown RBP12.36□□□□□ -0.43
RAB3IP-218ENST00000553099 PIK3C2GO75747 1445 aa12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 RALBP1Q15311 655 aa12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 RPGRIP1LQ68CZ1 1315 aa12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 MYBBP1AQ9BQG0 1328 aaKnown RBP12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 ARHGEF40Q8TER5 1519 aa12.35□□□□□ -0.43
RAB3IP-218ENST00000553099 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 TRAK1Q9UPV9 953 aa12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 SUPT16HQ9Y5B9 1047 aaKnown RBP12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 PER1O15534 1290 aaPredicted RBP12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 SLC52A1Q9NWF4 448 aa12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 NEXMIFQ5QGS0 1516 aa12.34□□□□□ -0.43
RAB3IP-218ENST00000553099 AGLP35573 1532 aa12.33□□□□□ -0.44
RAB3IP-218ENST00000553099 SETBP1Q9Y6X0 1596 aa12.33□□□□□ -0.44
RAB3IP-218ENST00000553099 VGFO15240 615 aaPredicted RBP12.33□□□□□ -0.44
RAB3IP-218ENST00000553099 STAG3Q9UJ98 1225 aa12.33□□□□□ -0.44
RAB3IP-218ENST00000553099 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
RAB3IP-218ENST00000553099 C14orf93Q9H972 538 aaKnown RBP12.32□□□□□ -0.44
RAB3IP-218ENST00000553099 MYOM1P52179 1685 aa12.32□□□□□ -0.44
RAB3IP-218ENST00000553099 ERVK-7P63135 1459 aa12.31□□□□□ -0.44
RAB3IP-218ENST00000553099 PARD3Q8TEW0 1356 aa12.31□□□□□ -0.44
RAB3IP-218ENST00000553099 ESF1Q9H501 851 aaKnown RBP12.31□□□□□ -0.44
RAB3IP-218ENST00000553099 CENPJQ9HC77 1338 aaPredicted RBP12.31□□□□□ -0.44
RAB3IP-218ENST00000553099 TMEM131LA2VDJ0 1609 aa12.31□□□□□ -0.44
RAB3IP-218ENST00000553099 NEFLP07196 543 aa12.31□□□□□ -0.44
RAB3IP-218ENST00000553099 BRD4O60885 1362 aaPredicted RBP12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 MYO3AQ8NEV4 1616 aa12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 FKBP8Q14318 412 aa12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 KNSTRNQ9Y448 316 aa12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 ADGRB1O14514 1584 aa12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
RAB3IP-218ENST00000553099 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
RAB3IP-218ENST00000553099 PNISRQ8TF01 805 aaKnown RBP12.29□□□□□ -0.44
RAB3IP-218ENST00000553099 BCANQ96GW7 911 aa12.29□□□□□ -0.44
RAB3IP-218ENST00000553099 PPP6R1Q9UPN7 881 aa12.28□□□□□ -0.44
RAB3IP-218ENST00000553099 SLC24A1O60721 1099 aa12.27□□□□□ -0.44
RAB3IP-218ENST00000553099 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
RAB3IP-218ENST00000553099 ARHGEF28Q8N1W1 1705 aaKnown RBP12.26□□□□□ -0.45
RAB3IP-218ENST00000553099 SAFB2Q14151 953 aaKnown RBP eCLIP12.26□□□□□ -0.45
RAB3IP-218ENST00000553099 STK26Q9P289 416 aa12.26□□□□□ -0.45
RAB3IP-218ENST00000553099 SBNO2Q9Y2G9 1366 aa12.25□□□□□ -0.45
RAB3IP-218ENST00000553099 SPATA31D1Q6ZQQ2 1576 aa12.25□□□□□ -0.45
RAB3IP-218ENST00000553099 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
RAB3IP-218ENST00000553099 TRHP20396 242 aaPredicted RBP12.24□□□□□ -0.45
RAB3IP-218ENST00000553099 ZFYVE9O95405 1425 aa12.23□□□□□ -0.45
RAB3IP-218ENST00000553099 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-218ENST00000553099 LRPPRCP42704 1394 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-218ENST00000553099 ZMYM3Q14202 1370 aa12.22□□□□□ -0.45
RAB3IP-218ENST00000553099 IRX6P78412 446 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-218ENST00000553099 SALL2Q9Y467 1007 aaPredicted RBP12.22□□□□□ -0.45
RAB3IP-218ENST00000553099 A2ML1A8K2U0 1454 aa12.21□□□□□ -0.45
RAB3IP-218ENST00000553099 PPP2R1AP30153 589 aa12.2□□□□□ -0.46
RAB3IP-218ENST00000553099 SLC12A5Q9H2X9 1139 aa12.2□□□□□ -0.46
RAB3IP-218ENST00000553099 EVC2Q86UK5 1308 aa12.2□□□□□ -0.46
RAB3IP-218ENST00000553099 ALKQ9UM73 1620 aa12.2□□□□□ -0.46
RAB3IP-218ENST00000553099 RIMS2Q9UQ26 1411 aa12.19□□□□□ -0.46
RAB3IP-218ENST00000553099 PLPPR3Q6T4P5 718 aa12.19□□□□□ -0.46
RAB3IP-218ENST00000553099 CARD14Q9BXL6 1004 aa12.19□□□□□ -0.46
RAB3IP-218ENST00000553099 TULP4Q9NRJ4 1543 aa12.19□□□□□ -0.46
RAB3IP-218ENST00000553099 POGKQ9P215 609 aa12.18□□□□□ -0.46
RAB3IP-218ENST00000553099 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
RAB3IP-218ENST00000553099 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
RAB3IP-218ENST00000553099 NSD3Q9BZ95 1437 aa12.18□□□□□ -0.46
RAB3IP-218ENST00000553099 PRAM1Q96QH2 718 aa12.17□□□□□ -0.46
RAB3IP-218ENST00000553099 MINK1Q8N4C8 1332 aaPredicted RBP12.17□□□□□ -0.46
RAB3IP-218ENST00000553099 SRPK2P78362 688 aaKnown RBP12.17□□□□□ -0.46
RAB3IP-218ENST00000553099 TNRQ92752 1358 aa12.16□□□□□ -0.46
RAB3IP-218ENST00000553099 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
RAB3IP-218ENST00000553099 PTPRMP28827 1452 aa12.16□□□□□ -0.46
RAB3IP-218ENST00000553099 WDR43Q15061 677 aaKnown RBP eCLIP12.15□□□□□ -0.46
RAB3IP-218ENST00000553099 PELP1Q8IZL8 1130 aaKnown RBP12.15□□□□□ -0.46
RAB3IP-218ENST00000553099 NUDCQ9Y266 331 aa12.15□□□□□ -0.46
RAB3IP-218ENST00000553099 SMG6Q86US8 1419 aaKnown RBP12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms