RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 MPHOSPH9Q99550 1183 aa17.4■□□□□ 0.38
TRAFD1-209ENST00000552896 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
TRAFD1-209ENST00000552896 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
TRAFD1-209ENST00000552896 NEXMIFQ5QGS0 1516 aa17.37■□□□□ 0.37
TRAFD1-209ENST00000552896 CCDC144AA2RUR9 1427 aa17.37■□□□□ 0.37
TRAFD1-209ENST00000552896 LTBP4Q8N2S1 1624 aa17.36■□□□□ 0.37
TRAFD1-209ENST00000552896 DIP2AQ14689 1571 aa17.36■□□□□ 0.37
TRAFD1-209ENST00000552896 STRCP1A6NGW2 1772 aa17.35■□□□□ 0.37
TRAFD1-209ENST00000552896 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
TRAFD1-209ENST00000552896 EID1Q9Y6B2 187 aa17.35■□□□□ 0.37
TRAFD1-209ENST00000552896 NRXN3Q9Y4C0 1643 aa17.34■□□□□ 0.37
TRAFD1-209ENST00000552896 LTKP29376 864 aa17.33■□□□□ 0.36
TRAFD1-209ENST00000552896 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
TRAFD1-209ENST00000552896 PLEKHG1Q9ULL1 1385 aa17.32■□□□□ 0.36
TRAFD1-209ENST00000552896 TXNDC2Q86VQ3 553 aa17.32■□□□□ 0.36
TRAFD1-209ENST00000552896 CHGAP10645 457 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-209ENST00000552896 NWD1Q149M9 1564 aa17.31■□□□□ 0.36
TRAFD1-209ENST00000552896 CPS1P31327 1500 aa17.31■□□□□ 0.36
TRAFD1-209ENST00000552896 CHD2O14647 1828 aaKnown RBP17.31■□□□□ 0.36
TRAFD1-209ENST00000552896 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
TRAFD1-209ENST00000552896 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
TRAFD1-209ENST00000552896 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRAFD1-209ENST00000552896 IQSEC2Q5JU85 1478 aa17.29■□□□□ 0.36
TRAFD1-209ENST00000552896 ANKRD30BQ9BXX2 1392 aa17.28■□□□□ 0.36
TRAFD1-209ENST00000552896 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
TRAFD1-209ENST00000552896 XIRP1Q702N8 1843 aaKnown RBP17.26■□□□□ 0.35
TRAFD1-209ENST00000552896 ZNF335Q9H4Z2 1342 aaPredicted RBP17.26■□□□□ 0.35
TRAFD1-209ENST00000552896 PPP1R15AO75807 674 aaPredicted RBP17.26■□□□□ 0.35
TRAFD1-209ENST00000552896 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
TRAFD1-209ENST00000552896 ADAMTS13Q76LX8 1427 aa17.24■□□□□ 0.35
TRAFD1-209ENST00000552896 RPGRIP1LQ68CZ1 1315 aa17.23■□□□□ 0.35
TRAFD1-209ENST00000552896 LAMC1P11047 1609 aa17.23■□□□□ 0.35
TRAFD1-209ENST00000552896 XRN1Q8IZH2 1706 aaKnown RBP17.23■□□□□ 0.35
TRAFD1-209ENST00000552896 NKTRP30414 1462 aaKnown RBP17.23■□□□□ 0.35
TRAFD1-209ENST00000552896 MYOM2P54296 1465 aa17.22■□□□□ 0.35
TRAFD1-209ENST00000552896 PIK3R4Q99570 1358 aa17.19■□□□□ 0.34
TRAFD1-209ENST00000552896 ALKQ9UM73 1620 aa17.19■□□□□ 0.34
TRAFD1-209ENST00000552896 CERKQ8TCT0 537 aa17.19■□□□□ 0.34
TRAFD1-209ENST00000552896 LRRC7Q96NW7 1537 aa17.18■□□□□ 0.34
TRAFD1-209ENST00000552896 NUTM2DQ5VT03 806 aaPredicted RBP17.18■□□□□ 0.34
TRAFD1-209ENST00000552896 NRXN1Q9ULB1 1477 aa17.18■□□□□ 0.34
TRAFD1-209ENST00000552896 DHX57Q6P158 1386 aaKnown RBP17.17■□□□□ 0.34
TRAFD1-209ENST00000552896 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
TRAFD1-209ENST00000552896 PIK3C2GO75747 1445 aa17.16■□□□□ 0.34
TRAFD1-209ENST00000552896 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
TRAFD1-209ENST00000552896 BCANQ96GW7 911 aa17.16■□□□□ 0.34
TRAFD1-209ENST00000552896 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
TRAFD1-209ENST00000552896 TBX22Q9Y458 520 aa17.15■□□□□ 0.34
TRAFD1-209ENST00000552896 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
TRAFD1-209ENST00000552896 KCNA6P17658 529 aa17.12■□□□□ 0.33
TRAFD1-209ENST00000552896 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
TRAFD1-209ENST00000552896 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
TRAFD1-209ENST00000552896 KIAA1210Q9ULL0 1709 aa17.11■□□□□ 0.33
TRAFD1-209ENST00000552896 PTPRUQ92729 1446 aa17.11■□□□□ 0.33
TRAFD1-209ENST00000552896 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
TRAFD1-209ENST00000552896 METP08581 1390 aa17.09■□□□□ 0.33
TRAFD1-209ENST00000552896 NALCNQ8IZF0 1738 aa17.09■□□□□ 0.33
TRAFD1-209ENST00000552896 PTCH1Q13635 1447 aa17.08■□□□□ 0.32
TRAFD1-209ENST00000552896 FBXO41Q8TF61 875 aa17.07■□□□□ 0.32
TRAFD1-209ENST00000552896 NCOA3Q9Y6Q9 1424 aa17.06■□□□□ 0.32
TRAFD1-209ENST00000552896 TMEM94Q12767 1356 aa17.06■□□□□ 0.32
TRAFD1-209ENST00000552896 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.06■□□□□ 0.32
TRAFD1-209ENST00000552896 STAC3Q96MF2 364 aa17.05■□□□□ 0.32
TRAFD1-209ENST00000552896 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
TRAFD1-209ENST00000552896 ADGRB1O14514 1584 aa17.04■□□□□ 0.32
TRAFD1-209ENST00000552896 TECPR2O15040 1411 aa17.04■□□□□ 0.32
TRAFD1-209ENST00000552896 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
TRAFD1-209ENST00000552896 AMOTL2Q9Y2J4 779 aa17.01■□□□□ 0.31
TRAFD1-209ENST00000552896 ARHGEF28Q8N1W1 1705 aaKnown RBP17.01■□□□□ 0.31
TRAFD1-209ENST00000552896 TRPM1Q7Z4N2 1603 aa17■□□□□ 0.31
TRAFD1-209ENST00000552896 DCCP43146 1447 aa17■□□□□ 0.31
TRAFD1-209ENST00000552896 DCAF11Q8TEB1 546 aa17■□□□□ 0.31
TRAFD1-209ENST00000552896 MSH6P52701 1360 aa17■□□□□ 0.31
TRAFD1-209ENST00000552896 YTHDC2Q9H6S0 1430 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-209ENST00000552896 DLC1Q96QB1 1528 aa16.99■□□□□ 0.31
TRAFD1-209ENST00000552896 LRPPRCP42704 1394 aaKnown RBP16.99■□□□□ 0.31
TRAFD1-209ENST00000552896 ADGRL3Q9HAR2 1447 aa16.98■□□□□ 0.31
TRAFD1-209ENST00000552896 C14orf93Q9H972 538 aaKnown RBP16.98■□□□□ 0.31
TRAFD1-209ENST00000552896 CDC42BPGQ6DT37 1551 aa16.98■□□□□ 0.31
TRAFD1-209ENST00000552896 UBAP1LF5GYI3 381 aa16.97■□□□□ 0.31
TRAFD1-209ENST00000552896 ILDR1Q86SU0 546 aaPredicted RBP16.97■□□□□ 0.31
TRAFD1-209ENST00000552896 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
TRAFD1-209ENST00000552896 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
TRAFD1-209ENST00000552896 SIN3AQ96ST3 1273 aa16.96■□□□□ 0.31
TRAFD1-209ENST00000552896 ABCC11Q96J66 1382 aa16.96■□□□□ 0.31
TRAFD1-209ENST00000552896 TOM1O60784 492 aa16.95■□□□□ 0.3
TRAFD1-209ENST00000552896 FAM135BQ49AJ0 1406 aa16.95■□□□□ 0.3
TRAFD1-209ENST00000552896 KDM2AQ9Y2K7 1162 aa16.94■□□□□ 0.3
TRAFD1-209ENST00000552896 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
TRAFD1-209ENST00000552896 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
TRAFD1-209ENST00000552896 CFAP70Q5T0N1 1121 aa16.93■□□□□ 0.3
TRAFD1-209ENST00000552896 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
TRAFD1-209ENST00000552896 FMN2Q9NZ56 1722 aa16.93■□□□□ 0.3
TRAFD1-209ENST00000552896 NEUROD1Q13562 356 aa16.92■□□□□ 0.3
TRAFD1-209ENST00000552896 L3MBTL2Q969R5 705 aa16.92■□□□□ 0.3
TRAFD1-209ENST00000552896 TONSLQ96HA7 1378 aa16.91■□□□□ 0.3
TRAFD1-209ENST00000552896 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
TRAFD1-209ENST00000552896 C14orf37Q86TY3 774 aa16.91■□□□□ 0.3
TRAFD1-209ENST00000552896 C19orf44Q9H6X5 657 aa16.9■□□□□ 0.3
TRAFD1-209ENST00000552896 NHSL1Q5SYE7 1610 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms