RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 FOXD4L4Q8WXT5 416 aaPredicted RBP9.91□□□□□ -0.82
RFX4-211ENST00000552866 FOSBP53539 338 aa9.9□□□□□ -0.82
RFX4-211ENST00000552866 PCDHGA4Q9Y5G9 962 aa9.9□□□□□ -0.82
RFX4-211ENST00000552866 LILRB3O75022 631 aa9.89□□□□□ -0.83
RFX4-211ENST00000552866 SEC24BO95487 1268 aa9.89□□□□□ -0.83
RFX4-211ENST00000552866 C3orf67Q6ZVT6 689 aa9.89□□□□□ -0.83
RFX4-211ENST00000552866 AP1G2O75843 785 aa9.88□□□□□ -0.83
RFX4-211ENST00000552866 USP17L8P0C7I0 530 aa9.88□□□□□ -0.83
RFX4-211ENST00000552866 NUTM1Q86Y26 1132 aa9.88□□□□□ -0.83
RFX4-211ENST00000552866 KDM4FA0A1W2PPD8 638 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 RBM25P49756 843 aaKnown RBP9.87□□□□□ -0.83
RFX4-211ENST00000552866 PRSS12P56730 875 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 QPCTQ16769 361 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 CSPP1Q1MSJ5 1256 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 ZNF710Q8N1W2 664 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 COLQQ9Y215 455 aaPredicted RBP9.87□□□□□ -0.83
RFX4-211ENST00000552866 NDUFB9Q9Y6M9 179 aa9.87□□□□□ -0.83
RFX4-211ENST00000552866 MOXD2PA6NHM9 499 aa9.86□□□□□ -0.83
RFX4-211ENST00000552866 CSB-PGBD3P0DP91 1061 aa9.86□□□□□ -0.83
RFX4-211ENST00000552866 ZDHHC16Q969W1 377 aa9.86□□□□□ -0.83
RFX4-211ENST00000552866 RCCD1A6NED2 376 aa9.85□□□□□ -0.83
RFX4-211ENST00000552866 WASHC4Q2M389 1173 aa9.85□□□□□ -0.83
RFX4-211ENST00000552866 ADAMTS19Q8TE59 1207 aa9.85□□□□□ -0.83
RFX4-211ENST00000552866 CDCA7LQ96GN5 454 aa9.85□□□□□ -0.83
RFX4-211ENST00000552866 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.84□□□□□ -0.83
RFX4-211ENST00000552866 CFAP70Q5T0N1 1121 aa9.84□□□□□ -0.83
RFX4-211ENST00000552866 HDGFL1Q5TGJ6 251 aa9.84□□□□□ -0.83
RFX4-211ENST00000552866 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
RFX4-211ENST00000552866 GJD4Q96KN9 370 aaPredicted RBP9.84□□□□□ -0.83
RFX4-211ENST00000552866 SRPK2P78362 688 aaKnown RBP9.83□□□□□ -0.84
RFX4-211ENST00000552866 RTL5Q5HYW3 569 aaPredicted RBP9.83□□□□□ -0.84
RFX4-211ENST00000552866 ZNF454Q8N9F8 522 aa9.82□□□□□ -0.84
RFX4-211ENST00000552866 ZNF428Q96B54 188 aa9.82□□□□□ -0.84
RFX4-211ENST00000552866 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
RFX4-211ENST00000552866 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
RFX4-211ENST00000552866 NDUFV2P19404 249 aa9.81□□□□□ -0.84
RFX4-211ENST00000552866 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
RFX4-211ENST00000552866 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
RFX4-211ENST00000552866 EYA1Q99502 592 aa9.81□□□□□ -0.84
RFX4-211ENST00000552866 PCDHB15Q9Y5E8 787 aa9.81□□□□□ -0.84
RFX4-211ENST00000552866 DDX11L8A8MPP1 907 aa9.8□□□□□ -0.84
RFX4-211ENST00000552866 RFX1P22670 979 aa9.8□□□□□ -0.84
RFX4-211ENST00000552866 ADAM33Q9BZ11 813 aa9.8□□□□□ -0.84
RFX4-211ENST00000552866 PPP1R12CQ9BZL4 782 aa9.8□□□□□ -0.84
RFX4-211ENST00000552866 DNAJB2P25686 324 aa9.79□□□□□ -0.84
RFX4-211ENST00000552866 CABLES1Q8TDN4 633 aa9.79□□□□□ -0.84
RFX4-211ENST00000552866 ZBTB3Q9H5J0 574 aa9.79□□□□□ -0.84
RFX4-211ENST00000552866 E9PSI1 815 aa9.78□□□□□ -0.84
RFX4-211ENST00000552866 GPR37L1O60883 481 aa9.78□□□□□ -0.84
RFX4-211ENST00000552866 FAM198AQ9UFP1 575 aa9.78□□□□□ -0.84
RFX4-211ENST00000552866 AMOTL2Q9Y2J4 779 aa9.78□□□□□ -0.84
RFX4-211ENST00000552866 CCDC27Q2M243 656 aa9.77□□□□□ -0.85
RFX4-211ENST00000552866 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
RFX4-211ENST00000552866 POTEFA5A3E0 1075 aa9.76□□□□□ -0.85
RFX4-211ENST00000552866 SND1Q7KZF4 910 aaKnown RBP eCLIP9.76□□□□□ -0.85
RFX4-211ENST00000552866 IVNS1ABPQ9Y6Y0 642 aa9.76□□□□□ -0.85
RFX4-211ENST00000552866 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
RFX4-211ENST00000552866 USP46P62068 366 aa9.75□□□□□ -0.85
RFX4-211ENST00000552866 PELP1Q8IZL8 1130 aaKnown RBP9.75□□□□□ -0.85
RFX4-211ENST00000552866 TRIM34Q9BYJ4 488 aa9.75□□□□□ -0.85
RFX4-211ENST00000552866 TMEM134Q9H6X4 195 aa9.75□□□□□ -0.85
RFX4-211ENST00000552866 NBPF26B4DH59 902 aa9.74□□□□□ -0.85
RFX4-211ENST00000552866 KDM4AO75164 1064 aa9.74□□□□□ -0.85
RFX4-211ENST00000552866 ALG2Q9H553 416 aa9.74□□□□□ -0.85
RFX4-211ENST00000552866 HMX1Q9NP08 348 aaPredicted RBP9.74□□□□□ -0.85
RFX4-211ENST00000552866 IGSF3O75054 1194 aa9.73□□□□□ -0.85
RFX4-211ENST00000552866 VAC14Q08AM6 782 aa9.73□□□□□ -0.85
RFX4-211ENST00000552866 HAX1O00165 279 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 HOXA2O43364 376 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 ATG7O95352 703 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 C7P10643 843 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 LMOD1P29536 600 aaPredicted RBP9.72□□□□□ -0.85
RFX4-211ENST00000552866 SOX11P35716 441 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 EVX2Q03828 476 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 RDH13Q8NBN7 331 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 VRTNQ9H8Y1 702 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 TSKSQ9UJT2 592 aa9.72□□□□□ -0.85
RFX4-211ENST00000552866 CARNS1A5YM72 827 aa9.71□□□□□ -0.86
RFX4-211ENST00000552866 TMEM88BA6NKF7 163 aa9.71□□□□□ -0.86
RFX4-211ENST00000552866 FDX1P10109 184 aa9.71□□□□□ -0.86
RFX4-211ENST00000552866 NUDT18Q6ZVK8 323 aa9.71□□□□□ -0.86
RFX4-211ENST00000552866 HELBQ8NG08 1087 aaPredicted RBP9.71□□□□□ -0.86
RFX4-211ENST00000552866 UCN2Q96RP3 112 aa9.71□□□□□ -0.86
RFX4-211ENST00000552866 CTDSPL2Q05D32 466 aa9.7□□□□□ -0.86
RFX4-211ENST00000552866 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
RFX4-211ENST00000552866 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
RFX4-211ENST00000552866 COL9A1P20849 921 aa9.69□□□□□ -0.86
RFX4-211ENST00000552866 PPP1R3GB7ZBB8 358 aa9.68□□□□□ -0.86
RFX4-211ENST00000552866 NUDT7P0C024 238 aa9.68□□□□□ -0.86
RFX4-211ENST00000552866 B4GALNT3Q6L9W6 998 aa9.68□□□□□ -0.86
RFX4-211ENST00000552866 TATDN2Q93075 761 aa9.68□□□□□ -0.86
RFX4-211ENST00000552866 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
RFX4-211ENST00000552866 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
RFX4-211ENST00000552866 C3orf80F5H4A9 247 aa9.67□□□□□ -0.86
RFX4-211ENST00000552866 GCGRP47871 477 aa9.67□□□□□ -0.86
RFX4-211ENST00000552866 PCDHGC3Q9UN70 934 aa9.67□□□□□ -0.86
RFX4-211ENST00000552866 GNEQ9Y223 722 aaKnown RBP9.67□□□□□ -0.86
RFX4-211ENST00000552866 MAFBQ9Y5Q3 323 aaPredicted RBP9.67□□□□□ -0.86
RFX4-211ENST00000552866 MTMR2Q13614 643 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms