RNA–Protein interactions for RNA: ENST00000552774.1

PDE1B-208, Transcript of phosphodiesterase 1B, humanhuman

TSL 4

Gene PDE1B, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1B-208ENST00000552774 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.75■□□□□ 0.43
PDE1B-208ENST00000552774 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
PDE1B-208ENST00000552774 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
PDE1B-208ENST00000552774 LTKP29376 864 aa17.74■□□□□ 0.43
PDE1B-208ENST00000552774 RGL3Q3MIN7 710 aa17.74■□□□□ 0.43
PDE1B-208ENST00000552774 POLR1AO95602 1720 aaPredicted RBP17.74■□□□□ 0.43
PDE1B-208ENST00000552774 DMRT2Q9Y5R5 561 aa17.72■□□□□ 0.43
PDE1B-208ENST00000552774 MED14O60244 1454 aa17.71■□□□□ 0.43
PDE1B-208ENST00000552774 PPP1R15AO75807 674 aaPredicted RBP17.71■□□□□ 0.43
PDE1B-208ENST00000552774 NEXMIFQ5QGS0 1516 aa17.71■□□□□ 0.43
PDE1B-208ENST00000552774 SIN3AQ96ST3 1273 aa17.7■□□□□ 0.42
PDE1B-208ENST00000552774 NPHP4O75161 1426 aaPredicted RBP17.7■□□□□ 0.42
PDE1B-208ENST00000552774 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
PDE1B-208ENST00000552774 NUTM2DQ5VT03 806 aaPredicted RBP17.69■□□□□ 0.42
PDE1B-208ENST00000552774 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
PDE1B-208ENST00000552774 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
PDE1B-208ENST00000552774 CCER1Q8TC90 406 aaPredicted RBP17.68■□□□□ 0.42
PDE1B-208ENST00000552774 PPLO60437 1756 aa17.68■□□□□ 0.42
PDE1B-208ENST00000552774 PLEKHG1Q9ULL1 1385 aa17.67■□□□□ 0.42
PDE1B-208ENST00000552774 IQGAP1P46940 1657 aa17.67■□□□□ 0.42
PDE1B-208ENST00000552774 IFT172Q9UG01 1749 aa17.65■□□□□ 0.42
PDE1B-208ENST00000552774 STAC3Q96MF2 364 aa17.65■□□□□ 0.42
PDE1B-208ENST00000552774 BCANQ96GW7 911 aa17.64■□□□□ 0.41
PDE1B-208ENST00000552774 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
PDE1B-208ENST00000552774 MYOM2P54296 1465 aa17.62■□□□□ 0.41
PDE1B-208ENST00000552774 ADGRF5Q8IZF2 1346 aa17.61■□□□□ 0.41
PDE1B-208ENST00000552774 SETBP1Q9Y6X0 1596 aa17.61■□□□□ 0.41
PDE1B-208ENST00000552774 SLC26A8Q96RN1 970 aa17.6■□□□□ 0.41
PDE1B-208ENST00000552774 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
PDE1B-208ENST00000552774 KDM2AQ9Y2K7 1162 aa17.6■□□□□ 0.41
PDE1B-208ENST00000552774 ADAMTS13Q76LX8 1427 aa17.59■□□□□ 0.41
PDE1B-208ENST00000552774 L3MBTL2Q969R5 705 aa17.59■□□□□ 0.41
PDE1B-208ENST00000552774 TBX22Q9Y458 520 aa17.59■□□□□ 0.41
PDE1B-208ENST00000552774 TONSLQ96HA7 1378 aa17.58■□□□□ 0.4
PDE1B-208ENST00000552774 NRXN3Q9Y4C0 1643 aa17.58■□□□□ 0.4
PDE1B-208ENST00000552774 DIP2AQ14689 1571 aa17.57■□□□□ 0.4
PDE1B-208ENST00000552774 NRXN1Q9ULB1 1477 aa17.57■□□□□ 0.4
PDE1B-208ENST00000552774 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
PDE1B-208ENST00000552774 ALKQ9UM73 1620 aa17.54■□□□□ 0.4
PDE1B-208ENST00000552774 TIMELESSQ9UNS1 1208 aa17.54■□□□□ 0.4
PDE1B-208ENST00000552774 PIK3R4Q99570 1358 aa17.53■□□□□ 0.4
PDE1B-208ENST00000552774 ZNF335Q9H4Z2 1342 aaPredicted RBP17.52■□□□□ 0.4
PDE1B-208ENST00000552774 C14orf93Q9H972 538 aaKnown RBP17.52■□□□□ 0.4
PDE1B-208ENST00000552774 SETD1AO15047 1707 aaKnown RBP17.51■□□□□ 0.39
PDE1B-208ENST00000552774 METP08581 1390 aa17.51■□□□□ 0.39
PDE1B-208ENST00000552774 LAMC1P11047 1609 aa17.5■□□□□ 0.39
PDE1B-208ENST00000552774 PRAG1Q86YV5 1406 aa17.5■□□□□ 0.39
PDE1B-208ENST00000552774 KCNA6P17658 529 aa17.5■□□□□ 0.39
PDE1B-208ENST00000552774 CFAP70Q5T0N1 1121 aa17.5■□□□□ 0.39
PDE1B-208ENST00000552774 CHD2O14647 1828 aaKnown RBP17.49■□□□□ 0.39
PDE1B-208ENST00000552774 NWD1Q149M9 1564 aa17.47■□□□□ 0.39
PDE1B-208ENST00000552774 LTBP4Q8N2S1 1624 aa17.47■□□□□ 0.39
PDE1B-208ENST00000552774 PTPRUQ92729 1446 aa17.47■□□□□ 0.39
PDE1B-208ENST00000552774 STRCP1A6NGW2 1772 aa17.46■□□□□ 0.39
PDE1B-208ENST00000552774 AMOTL2Q9Y2J4 779 aa17.46■□□□□ 0.39
PDE1B-208ENST00000552774 KIAA1210Q9ULL0 1709 aa17.46■□□□□ 0.39
PDE1B-208ENST00000552774 CPS1P31327 1500 aa17.46■□□□□ 0.39
PDE1B-208ENST00000552774 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
PDE1B-208ENST00000552774 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
PDE1B-208ENST00000552774 ASXL1Q8IXJ9 1541 aa17.44■□□□□ 0.38
PDE1B-208ENST00000552774 NBPF8Q3BBV2 869 aa17.43■□□□□ 0.38
PDE1B-208ENST00000552774 XRN1Q8IZH2 1706 aaKnown RBP17.43■□□□□ 0.38
PDE1B-208ENST00000552774 LRPPRCP42704 1394 aaKnown RBP17.42■□□□□ 0.38
PDE1B-208ENST00000552774 ADGRB1O14514 1584 aa17.42■□□□□ 0.38
PDE1B-208ENST00000552774 ABCC11Q96J66 1382 aa17.41■□□□□ 0.38
PDE1B-208ENST00000552774 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
PDE1B-208ENST00000552774 PROSER2Q86WR7 435 aaPredicted RBP17.41■□□□□ 0.38
PDE1B-208ENST00000552774 TRPM1Q7Z4N2 1603 aa17.4■□□□□ 0.38
PDE1B-208ENST00000552774 NBPF1Q3BBV0 1214 aa17.4■□□□□ 0.38
PDE1B-208ENST00000552774 STK26Q9P289 416 aa17.4■□□□□ 0.38
PDE1B-208ENST00000552774 LRRC7Q96NW7 1537 aa17.4■□□□□ 0.38
PDE1B-208ENST00000552774 TECPR2O15040 1411 aa17.39■□□□□ 0.38
PDE1B-208ENST00000552774 PTCH1Q13635 1447 aa17.38■□□□□ 0.37
PDE1B-208ENST00000552774 CERKQ8TCT0 537 aa17.38■□□□□ 0.37
PDE1B-208ENST00000552774 ROCK2O75116 1388 aaKnown RBP17.38■□□□□ 0.37
PDE1B-208ENST00000552774 KNDC1Q76NI1 1749 aa17.38■□□□□ 0.37
PDE1B-208ENST00000552774 TMEM94Q12767 1356 aa17.37■□□□□ 0.37
PDE1B-208ENST00000552774 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
PDE1B-208ENST00000552774 RALGAPBQ86X10 1494 aa17.37■□□□□ 0.37
PDE1B-208ENST00000552774 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
PDE1B-208ENST00000552774 NCOA3Q9Y6Q9 1424 aa17.36■□□□□ 0.37
PDE1B-208ENST00000552774 TRAK1Q9UPV9 953 aa17.35■□□□□ 0.37
PDE1B-208ENST00000552774 GPRASP1Q5JY77 1395 aa17.35■□□□□ 0.37
PDE1B-208ENST00000552774 IQSEC2Q5JU85 1478 aa17.35■□□□□ 0.37
PDE1B-208ENST00000552774 DLC1Q96QB1 1528 aa17.35■□□□□ 0.37
PDE1B-208ENST00000552774 FAM135BQ49AJ0 1406 aa17.34■□□□□ 0.37
PDE1B-208ENST00000552774 RBM33Q96EV2 1170 aaKnown RBP17.34■□□□□ 0.37
PDE1B-208ENST00000552774 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.37
PDE1B-208ENST00000552774 C14orf37Q86TY3 774 aa17.32■□□□□ 0.36
PDE1B-208ENST00000552774 CARD11Q9BXL7 1154 aa17.32■□□□□ 0.36
PDE1B-208ENST00000552774 WAPLQ7Z5K2 1190 aa17.31■□□□□ 0.36
PDE1B-208ENST00000552774 PRAM1Q96QH2 718 aa17.31■□□□□ 0.36
PDE1B-208ENST00000552774 C19orf44Q9H6X5 657 aa17.3■□□□□ 0.36
PDE1B-208ENST00000552774 POGKQ9P215 609 aa17.3■□□□□ 0.36
PDE1B-208ENST00000552774 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
PDE1B-208ENST00000552774 MSH6P52701 1360 aa17.29■□□□□ 0.36
PDE1B-208ENST00000552774 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
PDE1B-208ENST00000552774 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
PDE1B-208ENST00000552774 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
PDE1B-208ENST00000552774 SAFB2Q14151 953 aaKnown RBP eCLIP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms