RNA–Protein interactions for RNA: ENST00000552696.1

NPAS3-212, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-212ENST00000552696 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.17□□□□□ -1.26
NPAS3-212ENST00000552696 SOWAHBA6NEL2 793 aa7.16□□□□□ -1.26
NPAS3-212ENST00000552696 RNF40O75150 1001 aa7.16□□□□□ -1.26
NPAS3-212ENST00000552696 PRKCSHP14314 528 aaPredicted RBP7.16□□□□□ -1.26
NPAS3-212ENST00000552696 TRIM66O15016 1216 aa7.15□□□□□ -1.26
NPAS3-212ENST00000552696 MDM2Q00987 491 aaPredicted RBP7.15□□□□□ -1.26
NPAS3-212ENST00000552696 HDGFP51858 240 aaKnown RBP7.14□□□□□ -1.27
NPAS3-212ENST00000552696 HPS5Q9UPZ3 1129 aa7.14□□□□□ -1.27
NPAS3-212ENST00000552696 PTPN5P54829 565 aa7.13□□□□□ -1.27
NPAS3-212ENST00000552696 AMHR2Q16671 573 aa7.13□□□□□ -1.27
NPAS3-212ENST00000552696 SLF2Q8IX21 1173 aa7.13□□□□□ -1.27
NPAS3-212ENST00000552696 TTLL12Q14166 644 aaPredicted RBP7.12□□□□□ -1.27
NPAS3-212ENST00000552696 DAXXQ9UER7 740 aaPredicted RBP7.12□□□□□ -1.27
NPAS3-212ENST00000552696 CLCN1P35523 988 aa7.11□□□□□ -1.27
NPAS3-212ENST00000552696 SLC4A3P48751 1232 aa7.11□□□□□ -1.27
NPAS3-212ENST00000552696 PARP9Q8IXQ6 854 aa7.11□□□□□ -1.27
NPAS3-212ENST00000552696 REPIN1Q9BWE0 567 aaKnown RBP7.11□□□□□ -1.27
NPAS3-212ENST00000552696 GPCPD1Q9NPB8 672 aa7.11□□□□□ -1.27
NPAS3-212ENST00000552696 WBP1LQ9NX94 342 aa7.11□□□□□ -1.27
NPAS3-212ENST00000552696 TSR3Q9UJK0 312 aaKnown RBP7.11□□□□□ -1.27
NPAS3-212ENST00000552696 PPP4CP60510 307 aa7.1□□□□□ -1.27
NPAS3-212ENST00000552696 PDE4DQ08499 809 aa7.1□□□□□ -1.27
NPAS3-212ENST00000552696 TMUB1Q9BVT8 246 aa7.1□□□□□ -1.27
NPAS3-212ENST00000552696 DDX11L8A8MPP1 907 aa7.09□□□□□ -1.27
NPAS3-212ENST00000552696 SLC10A3P09131 477 aa7.09□□□□□ -1.27
NPAS3-212ENST00000552696 RDH13Q8NBN7 331 aa7.09□□□□□ -1.27
NPAS3-212ENST00000552696 HCSTQ9UBK5 93 aa7.09□□□□□ -1.27
NPAS3-212ENST00000552696 GIGYF2Q6Y7W6 1299 aaKnown RBP7.08□□□□□ -1.28
NPAS3-212ENST00000552696 SULF1Q8IWU6 871 aa7.08□□□□□ -1.28
NPAS3-212ENST00000552696 CFHP08603 1231 aa7.07□□□□□ -1.28
NPAS3-212ENST00000552696 NECTIN2Q92692 538 aa7.07□□□□□ -1.28
NPAS3-212ENST00000552696 FAM217BQ9NTX9 383 aaPredicted RBP7.07□□□□□ -1.28
NPAS3-212ENST00000552696 APLP1P51693 650 aa7.06□□□□□ -1.28
NPAS3-212ENST00000552696 CD46P15529 392 aa7.05□□□□□ -1.28
NPAS3-212ENST00000552696 NYAP1Q6ZVC0 841 aa7.05□□□□□ -1.28
NPAS3-212ENST00000552696 GPBP1L1Q9HC44 474 aaPredicted RBP7.05□□□□□ -1.28
NPAS3-212ENST00000552696 MS4A1P11836 297 aa7.04□□□□□ -1.28
NPAS3-212ENST00000552696 SSTR3P32745 418 aaPredicted RBP7.04□□□□□ -1.28
NPAS3-212ENST00000552696 KMT5BQ4FZB7 885 aa7.04□□□□□ -1.28
NPAS3-212ENST00000552696 RSPH4AQ5TD94 716 aa7.04□□□□□ -1.28
NPAS3-212ENST00000552696 GCGRP47871 477 aa7.02□□□□□ -1.29
NPAS3-212ENST00000552696 NEUROD2Q15784 382 aa7.02□□□□□ -1.29
NPAS3-212ENST00000552696 PRR14Q9BWN1 585 aa7.02□□□□□ -1.29
NPAS3-212ENST00000552696 KDM4CQ9H3R0 1056 aa7.02□□□□□ -1.29
NPAS3-212ENST00000552696 ACTN4O43707 911 aaKnown RBP7.01□□□□□ -1.29
NPAS3-212ENST00000552696 BRPF1P55201 1214 aaPredicted RBP7.01□□□□□ -1.29
NPAS3-212ENST00000552696 FUT2Q10981 343 aa7□□□□□ -1.29
NPAS3-212ENST00000552696 BEGAINQ9BUH8 593 aa7□□□□□ -1.29
NPAS3-212ENST00000552696 PCDHB3Q9Y5E6 796 aa7□□□□□ -1.29
NPAS3-212ENST00000552696 COPS2P61201 443 aa6.99□□□□□ -1.29
NPAS3-212ENST00000552696 KDM4AO75164 1064 aa6.98□□□□□ -1.29
NPAS3-212ENST00000552696 PUS10Q3MIT2 529 aaKnown RBP6.98□□□□□ -1.29
NPAS3-212ENST00000552696 BLOC1S3Q6QNY0 202 aa6.98□□□□□ -1.29
NPAS3-212ENST00000552696 MTRQ99707 1265 aa6.98□□□□□ -1.29
NPAS3-212ENST00000552696 NUTM1Q86Y26 1132 aa6.97□□□□□ -1.29
NPAS3-212ENST00000552696 HOXA2O43364 376 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 ITGBL1O95965 494 aaPredicted RBP6.96□□□□□ -1.3
NPAS3-212ENST00000552696 ATP6V1AP38606 617 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 TJAP1Q5JTD0 557 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 SPIRE2Q8WWL2 714 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 HLA-CQ95604 372 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 FAM117AQ9C073 453 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 IL21Q9HBE4 155 aa6.96□□□□□ -1.3
NPAS3-212ENST00000552696 USP46P62068 366 aa6.95□□□□□ -1.3
NPAS3-212ENST00000552696 MORN1Q5T089 497 aa6.95□□□□□ -1.3
NPAS3-212ENST00000552696 TBC1D2Q9BYX2 928 aa6.95□□□□□ -1.3
NPAS3-212ENST00000552696 TLL1O43897 1013 aa6.94□□□□□ -1.3
NPAS3-212ENST00000552696 GUCA2AQ02747 115 aa6.94□□□□□ -1.3
NPAS3-212ENST00000552696 GRIPAP1Q4V328 841 aa6.94□□□□□ -1.3
NPAS3-212ENST00000552696 ZNF516Q92618 1163 aa6.94□□□□□ -1.3
NPAS3-212ENST00000552696 DDRGK1Q96HY6 314 aa6.94□□□□□ -1.3
NPAS3-212ENST00000552696 PLA2G2EQ9NZK7 142 aa6.94□□□□□ -1.3
NPAS3-212ENST00000552696 PLEKHG3A1L390 1219 aa6.93□□□□□ -1.3
NPAS3-212ENST00000552696 NR1I2O75469 434 aa6.93□□□□□ -1.3
NPAS3-212ENST00000552696 KCNC4Q03721 635 aa6.93□□□□□ -1.3
NPAS3-212ENST00000552696 SLC27A5Q9Y2P5 690 aa6.93□□□□□ -1.3
NPAS3-212ENST00000552696 MOXD2PA6NHM9 499 aa6.92□□□□□ -1.3
NPAS3-212ENST00000552696 ZPR1O75312 459 aa6.92□□□□□ -1.3
NPAS3-212ENST00000552696 NDUFV2P19404 249 aa6.92□□□□□ -1.3
NPAS3-212ENST00000552696 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
NPAS3-212ENST00000552696 MYSM1Q5VVJ2 828 aa6.91□□□□□ -1.3
NPAS3-212ENST00000552696 SCUBE3Q8IX30 993 aa6.91□□□□□ -1.3
NPAS3-212ENST00000552696 FDX1P10109 184 aa6.9□□□□□ -1.3
NPAS3-212ENST00000552696 RSBN1LQ6PCB5 846 aaPredicted RBP6.9□□□□□ -1.3
NPAS3-212ENST00000552696 RNF19BQ6ZMZ0 732 aa6.9□□□□□ -1.3
NPAS3-212ENST00000552696 IL27Q8NEV9 243 aa6.9□□□□□ -1.3
NPAS3-212ENST00000552696 NKX2-3Q8TAU0 364 aa6.9□□□□□ -1.3
NPAS3-212ENST00000552696 THAP11Q96EK4 314 aa6.89□□□□□ -1.31
NPAS3-212ENST00000552696 PCDHGC3Q9UN70 934 aa6.89□□□□□ -1.31
NPAS3-212ENST00000552696 SPTLC1O15269 473 aa6.88□□□□□ -1.31
NPAS3-212ENST00000552696 ADH1BP00325 375 aa6.88□□□□□ -1.31
NPAS3-212ENST00000552696 CLK2P49760 499 aaKnown RBP6.88□□□□□ -1.31
NPAS3-212ENST00000552696 SH3D19Q5HYK7 790 aa6.88□□□□□ -1.31
NPAS3-212ENST00000552696 IFFO2Q5TF58 517 aa6.88□□□□□ -1.31
NPAS3-212ENST00000552696 RSPH6AQ9H0K4 717 aa6.88□□□□□ -1.31
NPAS3-212ENST00000552696 LIMD1Q9UGP4 676 aa6.88□□□□□ -1.31
NPAS3-212ENST00000552696 FMNL1O95466 1100 aaPredicted RBP6.87□□□□□ -1.31
NPAS3-212ENST00000552696 CSPP1Q1MSJ5 1256 aa6.87□□□□□ -1.31
NPAS3-212ENST00000552696 Q3C1V9 767 aa6.87□□□□□ -1.31
NPAS3-212ENST00000552696 BRICD5Q6PL45 260 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms