RNA–Protein interactions for RNA: ENST00000552628.1

LINC02396-204, Transcript of long intergenic non-protein coding RNA 2396, humanhuman

TSL 4

Gene LINC02396, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02396-204ENST00000552628 MEX3CQ5U5Q3 659 aaKnown RBP23.4■■□□□ 1.34
LINC02396-204ENST00000552628 JCADQ9P266 1359 aa23.37■■□□□ 1.33
LINC02396-204ENST00000552628 TET3O43151 1660 aa23.36■■□□□ 1.33
LINC02396-204ENST00000552628 FAM50AQ14320 339 aaKnown RBP23.36■■□□□ 1.33
LINC02396-204ENST00000552628 ADGRL2O95490 1459 aa23.34■■□□□ 1.33
LINC02396-204ENST00000552628 NUTM2DQ5VT03 806 aaPredicted RBP23.33■■□□□ 1.33
LINC02396-204ENST00000552628 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
LINC02396-204ENST00000552628 PHLPP1O60346 1717 aa23.32■■□□□ 1.32
LINC02396-204ENST00000552628 LMTK2Q8IWU2 1503 aa23.32■■□□□ 1.32
LINC02396-204ENST00000552628 NOS1P29475 1434 aa23.32■■□□□ 1.32
LINC02396-204ENST00000552628 KDM5AP29375 1690 aaKnown RBP23.32■■□□□ 1.32
LINC02396-204ENST00000552628 ATF3P18847 181 aa23.31■■□□□ 1.32
LINC02396-204ENST00000552628 TRIM52Q96A61 297 aa23.31■■□□□ 1.32
LINC02396-204ENST00000552628 ADGRB3O60242 1522 aa23.31■■□□□ 1.32
LINC02396-204ENST00000552628 ZNF772Q68DY9 489 aaPredicted RBP23.29■■□□□ 1.32
LINC02396-204ENST00000552628 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
LINC02396-204ENST00000552628 RIMS2Q9UQ26 1411 aa23.28■■□□□ 1.32
LINC02396-204ENST00000552628 TBX22Q9Y458 520 aa23.28■■□□□ 1.32
LINC02396-204ENST00000552628 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.32
LINC02396-204ENST00000552628 CADPS2Q86UW7 1296 aa23.26■■□□□ 1.31
LINC02396-204ENST00000552628 NUTM2BA6NNL0 878 aaPredicted RBP23.25■■□□□ 1.31
LINC02396-204ENST00000552628 NUTM2EB1AL46 878 aaPredicted RBP23.25■■□□□ 1.31
LINC02396-204ENST00000552628 NUTM2AQ8IVF1 878 aaPredicted RBP23.25■■□□□ 1.31
LINC02396-204ENST00000552628 NWD1Q149M9 1564 aa23.25■■□□□ 1.31
LINC02396-204ENST00000552628 SPATA31A6Q5VVP1 1343 aa23.25■■□□□ 1.31
LINC02396-204ENST00000552628 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
LINC02396-204ENST00000552628 RRBP1Q9P2E9 1410 aaKnown RBP23.24■■□□□ 1.31
LINC02396-204ENST00000552628 SETD1AO15047 1707 aaKnown RBP23.23■■□□□ 1.31
LINC02396-204ENST00000552628 ANKRD50Q9ULJ7 1429 aa23.23■■□□□ 1.31
LINC02396-204ENST00000552628 ROCK1Q13464 1354 aa23.21■■□□□ 1.31
LINC02396-204ENST00000552628 RPRD2Q5VT52 1461 aaKnown RBP23.2■■□□□ 1.3
LINC02396-204ENST00000552628 ZFYVE9O95405 1425 aa23.2■■□□□ 1.3
LINC02396-204ENST00000552628 RXRBP28702 533 aa23.2■■□□□ 1.3
LINC02396-204ENST00000552628 UPF1Q92900 1129 aaKnown RBP eCLIP23.2■■□□□ 1.3
LINC02396-204ENST00000552628 CHD2O14647 1828 aaKnown RBP23.19■■□□□ 1.3
LINC02396-204ENST00000552628 AMOTL2Q9Y2J4 779 aa23.18■■□□□ 1.3
LINC02396-204ENST00000552628 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
LINC02396-204ENST00000552628 PPARGC1BQ86YN6 1023 aaKnown RBP23.16■■□□□ 1.3
LINC02396-204ENST00000552628 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
LINC02396-204ENST00000552628 GCC2Q8IWJ2 1684 aa23.16■■□□□ 1.3
LINC02396-204ENST00000552628 LRP6O75581 1613 aa23.14■■□□□ 1.29
LINC02396-204ENST00000552628 COL16A1Q07092 1604 aaPredicted RBP23.14■■□□□ 1.29
LINC02396-204ENST00000552628 TMEM131LA2VDJ0 1609 aa23.12■■□□□ 1.29
LINC02396-204ENST00000552628 BRINP3Q76B58 766 aa23.12■■□□□ 1.29
LINC02396-204ENST00000552628 ITGAEP38570 1179 aa23.1■■□□□ 1.29
LINC02396-204ENST00000552628 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
LINC02396-204ENST00000552628 ADAMTS13Q76LX8 1427 aa23.09■■□□□ 1.29
LINC02396-204ENST00000552628 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.09■■□□□ 1.29
LINC02396-204ENST00000552628 PIK3R4Q99570 1358 aa23.09■■□□□ 1.29
LINC02396-204ENST00000552628 UNC13BO14795 1591 aa23.08■■□□□ 1.29
LINC02396-204ENST00000552628 AFF2P51816 1311 aa23.08■■□□□ 1.28
LINC02396-204ENST00000552628 C8orf37Q96NL8 207 aa23.07■■□□□ 1.28
LINC02396-204ENST00000552628 LRRC59Q96AG4 307 aaKnown RBP23.06■■□□□ 1.28
LINC02396-204ENST00000552628 NUP155O75694 1391 aa23.05■■□□□ 1.28
LINC02396-204ENST00000552628 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
LINC02396-204ENST00000552628 QTRT2Q9H974 415 aaKnown RBP23.04■■□□□ 1.28
LINC02396-204ENST00000552628 TRPM2O94759 1503 aa23.03■■□□□ 1.28
LINC02396-204ENST00000552628 DIP2AQ14689 1571 aa23.02■■□□□ 1.28
LINC02396-204ENST00000552628 SHPRHQ149N8 1683 aa23.02■■□□□ 1.28
LINC02396-204ENST00000552628 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
LINC02396-204ENST00000552628 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
LINC02396-204ENST00000552628 NGLY1Q96IV0 654 aa23■■□□□ 1.27
LINC02396-204ENST00000552628 E9PCH4 1651 aa23■■□□□ 1.27
LINC02396-204ENST00000552628 ADAMTS2O95450 1211 aa22.99■■□□□ 1.27
LINC02396-204ENST00000552628 IQGAP3Q86VI3 1631 aa22.98■■□□□ 1.27
LINC02396-204ENST00000552628 RBM6P78332 1123 aaKnown RBP22.98■■□□□ 1.27
LINC02396-204ENST00000552628 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
LINC02396-204ENST00000552628 DCCP43146 1447 aa22.94■■□□□ 1.26
LINC02396-204ENST00000552628 SETD5Q9C0A6 1442 aa22.94■■□□□ 1.26
LINC02396-204ENST00000552628 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
LINC02396-204ENST00000552628 MST1RQ04912 1400 aa22.93■■□□□ 1.26
LINC02396-204ENST00000552628 NAIPQ13075 1403 aa22.93■■□□□ 1.26
LINC02396-204ENST00000552628 CDK12Q9NYV4 1490 aaPredicted RBP22.92■■□□□ 1.26
LINC02396-204ENST00000552628 METP08581 1390 aa22.92■■□□□ 1.26
LINC02396-204ENST00000552628 PNPLA6Q8IY17 1366 aa22.89■■□□□ 1.25
LINC02396-204ENST00000552628 USP21Q9UK80 565 aa22.88■■□□□ 1.25
LINC02396-204ENST00000552628 RGS12O14924 1447 aa22.86■■□□□ 1.25
LINC02396-204ENST00000552628 FOXD1Q16676 465 aa22.86■■□□□ 1.25
LINC02396-204ENST00000552628 ADGRL3Q9HAR2 1447 aa22.84■■□□□ 1.25
LINC02396-204ENST00000552628 ORAI2Q96SN7 254 aa22.84■■□□□ 1.25
LINC02396-204ENST00000552628 NHSL1Q5SYE7 1610 aa22.83■■□□□ 1.25
LINC02396-204ENST00000552628 TRPC5Q9UL62 973 aaPredicted RBP22.83■■□□□ 1.25
LINC02396-204ENST00000552628 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
LINC02396-204ENST00000552628 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
LINC02396-204ENST00000552628 ATAD2Q6PL18 1390 aa22.81■■□□□ 1.24
LINC02396-204ENST00000552628 NRXN3Q9Y4C0 1643 aa22.81■■□□□ 1.24
LINC02396-204ENST00000552628 VGFO15240 615 aaPredicted RBP22.8■■□□□ 1.24
LINC02396-204ENST00000552628 C1orf167Q5SNV9 1468 aa22.79■■□□□ 1.24
LINC02396-204ENST00000552628 ZRANB1Q9UGI0 708 aa22.79■■□□□ 1.24
LINC02396-204ENST00000552628 SPHKAPQ2M3C7 1700 aa22.77■■□□□ 1.23
LINC02396-204ENST00000552628 ESCO1Q5FWF5 840 aa22.76■■□□□ 1.23
LINC02396-204ENST00000552628 SOS2Q07890 1332 aaPredicted RBP22.76■■□□□ 1.23
LINC02396-204ENST00000552628 FNBP4Q8N3X1 1017 aaPredicted RBP22.73■■□□□ 1.23
LINC02396-204ENST00000552628 NALCNQ8IZF0 1738 aa22.73■■□□□ 1.23
LINC02396-204ENST00000552628 ACIN1Q9UKV3 1341 aaKnown RBP22.72■■□□□ 1.23
LINC02396-204ENST00000552628 ROBO2Q9HCK4 1378 aa22.72■■□□□ 1.23
LINC02396-204ENST00000552628 XPCQ01831 940 aaPredicted RBP22.7■■□□□ 1.22
LINC02396-204ENST00000552628 NEXMIFQ5QGS0 1516 aa22.7■■□□□ 1.22
LINC02396-204ENST00000552628 PTCH1Q13635 1447 aa22.69■■□□□ 1.22
LINC02396-204ENST00000552628 NUTM2FA1L443 756 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms