RNA–Protein interactions for RNA: ENST00000551964.5

APAF1-210, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene APAF1, Length 5,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-210ENST00000551964 ROCK1Q13464 1354 aa23.69■■□□□ 1.38
APAF1-210ENST00000551964 GSE1Q14687 1217 aa23.69■■□□□ 1.38
APAF1-210ENST00000551964 CNTLNQ9NXG0 1405 aa23.68■■□□□ 1.38
APAF1-210ENST00000551964 TTC5Q8N0Z6 440 aa23.68■■□□□ 1.38
APAF1-210ENST00000551964 C9orf78Q9NZ63 289 aaPredicted RBP23.68■■□□□ 1.38
APAF1-210ENST00000551964 KIF21BO75037 1637 aa23.68■■□□□ 1.38
APAF1-210ENST00000551964 EIF2S2P20042 333 aaKnown RBP23.68■■□□□ 1.38
APAF1-210ENST00000551964 FANCIQ9NVI1 1328 aa23.68■■□□□ 1.38
APAF1-210ENST00000551964 RAD54L2Q9Y4B4 1467 aa23.67■■□□□ 1.38
APAF1-210ENST00000551964 LRRFIP1Q32MZ4 808 aaKnown RBP23.67■■□□□ 1.38
APAF1-210ENST00000551964 LRRC9Q6ZRR7 1453 aa23.67■■□□□ 1.38
APAF1-210ENST00000551964 MIA2Q96PC5 1412 aa23.67■■□□□ 1.38
APAF1-210ENST00000551964 ZNF644Q9H582 1327 aaPredicted RBP23.67■■□□□ 1.38
APAF1-210ENST00000551964 TPM3P06753 285 aa23.65■■□□□ 1.38
APAF1-210ENST00000551964 NCBP3Q53F19 620 aaKnown RBP23.64■■□□□ 1.38
APAF1-210ENST00000551964 ZKSCAN1P17029 563 aaPredicted RBP23.64■■□□□ 1.37
APAF1-210ENST00000551964 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.64■■□□□ 1.37
APAF1-210ENST00000551964 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.37
APAF1-210ENST00000551964 MARCH6O60337 910 aa23.63■■□□□ 1.37
APAF1-210ENST00000551964 GOLGA6L1Q8N7Z2 621 aa23.63■■□□□ 1.37
APAF1-210ENST00000551964 ANKRD50Q9ULJ7 1429 aa23.62■■□□□ 1.37
APAF1-210ENST00000551964 GOLGA6L19H0YKK7 550 aa23.62■■□□□ 1.37
APAF1-210ENST00000551964 IFIT2P09913 472 aaKnown RBP23.62■■□□□ 1.37
APAF1-210ENST00000551964 EVA1CP58658 441 aa23.62■■□□□ 1.37
APAF1-210ENST00000551964 GNAI1P63096 354 aa23.62■■□□□ 1.37
APAF1-210ENST00000551964 FYCO1Q9BQS8 1478 aa23.62■■□□□ 1.37
APAF1-210ENST00000551964 AKAP17AQ02040 695 aaKnown RBP23.62■■□□□ 1.37
APAF1-210ENST00000551964 FOXD4L6Q3SYB3 417 aaPredicted RBP23.61■■□□□ 1.37
APAF1-210ENST00000551964 FOXD4L3Q6VB84 417 aaPredicted RBP23.61■■□□□ 1.37
APAF1-210ENST00000551964 SYNE3Q6ZMZ3 975 aa23.61■■□□□ 1.37
APAF1-210ENST00000551964 DDX58O95786 925 aaKnown RBP23.6■■□□□ 1.37
APAF1-210ENST00000551964 AAMPQ13685 434 aa23.6■■□□□ 1.37
APAF1-210ENST00000551964 CASKIN1Q8WXD9 1431 aa23.6■■□□□ 1.37
APAF1-210ENST00000551964 BECN2A8MW95 431 aa23.59■■□□□ 1.37
APAF1-210ENST00000551964 FKBP5Q13451 457 aaPredicted RBP23.59■■□□□ 1.37
APAF1-210ENST00000551964 NECTIN2Q92692 538 aa23.59■■□□□ 1.37
APAF1-210ENST00000551964 NCOA2Q15596 1464 aa23.59■■□□□ 1.37
APAF1-210ENST00000551964 TPD52L1Q16890 204 aaPredicted RBP23.59■■□□□ 1.37
APAF1-210ENST00000551964 CPLX2Q6PUV4 134 aaKnown RBP23.59■■□□□ 1.37
APAF1-210ENST00000551964 ANO2Q9NQ90 1003 aa23.58■■□□□ 1.37
APAF1-210ENST00000551964 CHMP5Q9NZZ3 219 aa23.58■■□□□ 1.37
APAF1-210ENST00000551964 CYB5RLQ6IPT4 315 aa23.58■■□□□ 1.37
APAF1-210ENST00000551964 MCTP1Q6DN14 999 aa23.58■■□□□ 1.36
APAF1-210ENST00000551964 OSCARQ8IYS5 282 aa23.58■■□□□ 1.36
APAF1-210ENST00000551964 BRD4O60885 1362 aaPredicted RBP23.57■■□□□ 1.36
APAF1-210ENST00000551964 PSME1Q06323 249 aa23.56■■□□□ 1.36
APAF1-210ENST00000551964 VPS53Q5VIR6 699 aa23.56■■□□□ 1.36
APAF1-210ENST00000551964 INTS3Q68E01 1043 aaKnown RBP23.56■■□□□ 1.36
APAF1-210ENST00000551964 G3BP1Q13283 466 aaKnown RBP eCLIP23.55■■□□□ 1.36
APAF1-210ENST00000551964 TSPYL4Q9UJ04 414 aa23.55■■□□□ 1.36
APAF1-210ENST00000551964 PRDM2Q13029 1718 aa23.55■■□□□ 1.36
APAF1-210ENST00000551964 RNF20Q5VTR2 975 aa23.54■■□□□ 1.36
APAF1-210ENST00000551964 PES1O00541 588 aaKnown RBP23.54■■□□□ 1.36
APAF1-210ENST00000551964 TSR1Q2NL82 804 aaKnown RBP23.53■■□□□ 1.36
APAF1-210ENST00000551964 HSP90AB4PQ58FF6 505 aa23.53■■□□□ 1.36
APAF1-210ENST00000551964 A0A0U1RQG5 324 aaPredicted RBP23.53■■□□□ 1.36
APAF1-210ENST00000551964 TRIM29Q14134 588 aa23.53■■□□□ 1.36
APAF1-210ENST00000551964 HMOX1P09601 288 aa23.52■■□□□ 1.36
APAF1-210ENST00000551964 AMER1Q5JTC6 1135 aaPredicted RBP23.52■■□□□ 1.36
APAF1-210ENST00000551964 GGNBP2Q9H3C7 697 aa23.52■■□□□ 1.36
APAF1-210ENST00000551964 WASHC2AQ641Q2 1341 aa23.52■■□□□ 1.36
APAF1-210ENST00000551964 CEP89Q96ST8 783 aa23.51■■□□□ 1.35
APAF1-210ENST00000551964 LNPKQ9C0E8 428 aa23.5■■□□□ 1.35
APAF1-210ENST00000551964 RSPH6AQ9H0K4 717 aa23.5■■□□□ 1.35
APAF1-210ENST00000551964 TPM1P09493 284 aa23.5■■□□□ 1.35
APAF1-210ENST00000551964 AMOTL1Q8IY63 956 aa23.5■■□□□ 1.35
APAF1-210ENST00000551964 CPLX1O14810 134 aa23.49■■□□□ 1.35
APAF1-210ENST00000551964 PANK1Q8TE04 598 aa23.49■■□□□ 1.35
APAF1-210ENST00000551964 CABP2Q9NPB3 220 aa23.49■■□□□ 1.35
APAF1-210ENST00000551964 TPM2P07951 284 aa23.49■■□□□ 1.35
APAF1-210ENST00000551964 NOL10Q9BSC4 688 aaKnown RBP23.49■■□□□ 1.35
APAF1-210ENST00000551964 C22orf23Q9BZE7 217 aa23.48■■□□□ 1.35
APAF1-210ENST00000551964 ADAMTS8Q9UP79 889 aa23.48■■□□□ 1.35
APAF1-210ENST00000551964 ERC2O15083 957 aa23.48■■□□□ 1.35
APAF1-210ENST00000551964 NUCB2P80303 420 aa23.48■■□□□ 1.35
APAF1-210ENST00000551964 AQRO60306 1485 aaKnown RBP eCLIP23.48■■□□□ 1.35
APAF1-210ENST00000551964 APPP05067 770 aa23.48■■□□□ 1.35
APAF1-210ENST00000551964 RRBP1Q9P2E9 1410 aaKnown RBP23.47■■□□□ 1.35
APAF1-210ENST00000551964 TNNT3P45378 269 aaPredicted RBP23.46■■□□□ 1.35
APAF1-210ENST00000551964 TRDNQ13061 729 aa23.46■■□□□ 1.35
APAF1-210ENST00000551964 PDE4CQ08493 712 aa23.45■■□□□ 1.34
APAF1-210ENST00000551964 SMC3Q9UQE7 1217 aa23.45■■□□□ 1.34
APAF1-210ENST00000551964 ERICH3Q5RHP9 1530 aa23.45■■□□□ 1.34
APAF1-210ENST00000551964 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
APAF1-210ENST00000551964 BICD2Q8TD16 824 aa23.44■■□□□ 1.34
APAF1-210ENST00000551964 ARHGAP5Q13017 1502 aa23.44■■□□□ 1.34
APAF1-210ENST00000551964 CDC45O75419 566 aa23.44■■□□□ 1.34
APAF1-210ENST00000551964 HSP90AA2PQ14568 343 aaPredicted RBP23.44■■□□□ 1.34
APAF1-210ENST00000551964 NCAPD3P42695 1498 aa23.43■■□□□ 1.34
APAF1-210ENST00000551964 MTHFSP49914 203 aa23.43■■□□□ 1.34
APAF1-210ENST00000551964 FAM69CQ0P6D2 419 aa23.43■■□□□ 1.34
APAF1-210ENST00000551964 RAPGEF4Q8WZA2 1011 aa23.43■■□□□ 1.34
APAF1-210ENST00000551964 VPS37CA5D8V6 355 aaPredicted RBP23.42■■□□□ 1.34
APAF1-210ENST00000551964 PPP2R1AP30153 589 aa23.41■■□□□ 1.34
APAF1-210ENST00000551964 TCP11L2Q8N4U5 519 aa23.41■■□□□ 1.34
APAF1-210ENST00000551964 VPS37DQ86XT2 251 aa23.4■■□□□ 1.34
APAF1-210ENST00000551964 HOOK1Q9UJC3 728 aaKnown RBP23.4■■□□□ 1.34
APAF1-210ENST00000551964 UBTFL1P0CB47 393 aaPredicted RBP23.4■■□□□ 1.34
APAF1-210ENST00000551964 CCAR2Q8N163 923 aaKnown RBP23.4■■□□□ 1.34
APAF1-210ENST00000551964 RIC3Q7Z5B4 369 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms