RNA–Protein interactions for RNA: ENST00000551861.1

ITGA5-208, Transcript of integrin subunit alpha 5, humanhuman

TSL 4

Gene ITGA5, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-208ENST00000551861 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
ITGA5-208ENST00000551861 TET3O43151 1660 aa16.91■□□□□ 0.3
ITGA5-208ENST00000551861 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
ITGA5-208ENST00000551861 MSH6P52701 1360 aa16.89■□□□□ 0.3
ITGA5-208ENST00000551861 RBM33Q96EV2 1170 aaKnown RBP16.89■□□□□ 0.29
ITGA5-208ENST00000551861 XIRP1Q702N8 1843 aaKnown RBP16.89■□□□□ 0.29
ITGA5-208ENST00000551861 ROCK1Q13464 1354 aa16.89■□□□□ 0.29
ITGA5-208ENST00000551861 NKTRP30414 1462 aaKnown RBP16.88■□□□□ 0.29
ITGA5-208ENST00000551861 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
ITGA5-208ENST00000551861 GCC2Q8IWJ2 1684 aa16.88■□□□□ 0.29
ITGA5-208ENST00000551861 RIMS2Q9UQ26 1411 aa16.87■□□□□ 0.29
ITGA5-208ENST00000551861 UNC13BO14795 1591 aa16.86■□□□□ 0.29
ITGA5-208ENST00000551861 C14orf37Q86TY3 774 aa16.86■□□□□ 0.29
ITGA5-208ENST00000551861 NUP155O75694 1391 aa16.86■□□□□ 0.29
ITGA5-208ENST00000551861 SLAIN2Q9P270 581 aa16.84■□□□□ 0.29
ITGA5-208ENST00000551861 TBX22Q9Y458 520 aa16.84■□□□□ 0.29
ITGA5-208ENST00000551861 ZFYVE9O95405 1425 aa16.84■□□□□ 0.29
ITGA5-208ENST00000551861 TMEM131LA2VDJ0 1609 aa16.83■□□□□ 0.28
ITGA5-208ENST00000551861 NWD1Q149M9 1564 aa16.83■□□□□ 0.28
ITGA5-208ENST00000551861 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
ITGA5-208ENST00000551861 MYO5BQ9ULV0 1848 aa16.82■□□□□ 0.28
ITGA5-208ENST00000551861 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
ITGA5-208ENST00000551861 ROBO1Q9Y6N7 1651 aa16.81■□□□□ 0.28
ITGA5-208ENST00000551861 E9PCH4 1651 aa16.81■□□□□ 0.28
ITGA5-208ENST00000551861 IQGAP3Q86VI3 1631 aa16.8■□□□□ 0.28
ITGA5-208ENST00000551861 CHD2O14647 1828 aaKnown RBP16.79■□□□□ 0.28
ITGA5-208ENST00000551861 NCOA3Q9Y6Q9 1424 aa16.79■□□□□ 0.28
ITGA5-208ENST00000551861 ATF3P18847 181 aa16.78■□□□□ 0.28
ITGA5-208ENST00000551861 PIK3R4Q99570 1358 aa16.77■□□□□ 0.28
ITGA5-208ENST00000551861 ZNF326Q5BKZ1 582 aaKnown RBP16.77■□□□□ 0.28
ITGA5-208ENST00000551861 CADPS2Q86UW7 1296 aa16.77■□□□□ 0.28
ITGA5-208ENST00000551861 DIP2AQ14689 1571 aa16.77■□□□□ 0.27
ITGA5-208ENST00000551861 C19orf44Q9H6X5 657 aa16.76■□□□□ 0.27
ITGA5-208ENST00000551861 RGS17Q9UGC6 210 aaPredicted RBP16.75■□□□□ 0.27
ITGA5-208ENST00000551861 ADAMTS13Q76LX8 1427 aa16.74■□□□□ 0.27
ITGA5-208ENST00000551861 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
ITGA5-208ENST00000551861 JCADQ9P266 1359 aa16.74■□□□□ 0.27
ITGA5-208ENST00000551861 PHLPP1O60346 1717 aa16.73■□□□□ 0.27
ITGA5-208ENST00000551861 TRPM2O94759 1503 aa16.73■□□□□ 0.27
ITGA5-208ENST00000551861 MEX3CQ5U5Q3 659 aaKnown RBP16.7■□□□□ 0.26
ITGA5-208ENST00000551861 SPHKAPQ2M3C7 1700 aa16.68■□□□□ 0.26
ITGA5-208ENST00000551861 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
ITGA5-208ENST00000551861 SPATA31A6Q5VVP1 1343 aa16.68■□□□□ 0.26
ITGA5-208ENST00000551861 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
ITGA5-208ENST00000551861 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.67■□□□□ 0.26
ITGA5-208ENST00000551861 PTPRUQ92729 1446 aa16.63■□□□□ 0.25
ITGA5-208ENST00000551861 RRBP1Q9P2E9 1410 aaKnown RBP16.63■□□□□ 0.25
ITGA5-208ENST00000551861 ZNF772Q68DY9 489 aaPredicted RBP16.63■□□□□ 0.25
ITGA5-208ENST00000551861 SETBP1Q9Y6X0 1596 aa16.63■□□□□ 0.25
ITGA5-208ENST00000551861 COL16A1Q07092 1604 aaPredicted RBP16.63■□□□□ 0.25
ITGA5-208ENST00000551861 DCCP43146 1447 aa16.62■□□□□ 0.25
ITGA5-208ENST00000551861 VGFO15240 615 aaPredicted RBP16.62■□□□□ 0.25
ITGA5-208ENST00000551861 BRINP3Q76B58 766 aa16.62■□□□□ 0.25
ITGA5-208ENST00000551861 AHDC1Q5TGY3 1603 aaPredicted RBP16.61■□□□□ 0.25
ITGA5-208ENST00000551861 NAIPQ13075 1403 aa16.61■□□□□ 0.25
ITGA5-208ENST00000551861 SLC4A1APQ9BWU0 796 aaKnown RBP16.6■□□□□ 0.25
ITGA5-208ENST00000551861 KIF1BO60333 1816 aa16.6■□□□□ 0.25
ITGA5-208ENST00000551861 METP08581 1390 aa16.6■□□□□ 0.25
ITGA5-208ENST00000551861 NUTM2BA6NNL0 878 aaPredicted RBP16.59■□□□□ 0.25
ITGA5-208ENST00000551861 NUTM2EB1AL46 878 aaPredicted RBP16.59■□□□□ 0.25
ITGA5-208ENST00000551861 NUTM2AQ8IVF1 878 aaPredicted RBP16.59■□□□□ 0.25
ITGA5-208ENST00000551861 CLTCL1P53675 1640 aa16.59■□□□□ 0.25
ITGA5-208ENST00000551861 NRXN3Q9Y4C0 1643 aa16.59■□□□□ 0.25
ITGA5-208ENST00000551861 LRRC59Q96AG4 307 aaKnown RBP16.58■□□□□ 0.24
ITGA5-208ENST00000551861 XRN1Q8IZH2 1706 aaKnown RBP16.58■□□□□ 0.24
ITGA5-208ENST00000551861 NEXMIFQ5QGS0 1516 aa16.57■□□□□ 0.24
ITGA5-208ENST00000551861 RPGRIP1LQ68CZ1 1315 aa16.57■□□□□ 0.24
ITGA5-208ENST00000551861 SHPRHQ149N8 1683 aa16.56■□□□□ 0.24
ITGA5-208ENST00000551861 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
ITGA5-208ENST00000551861 HFM1A2PYH4 1435 aa16.55■□□□□ 0.24
ITGA5-208ENST00000551861 MST1RQ04912 1400 aa16.55■□□□□ 0.24
ITGA5-208ENST00000551861 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
ITGA5-208ENST00000551861 LRP6O75581 1613 aa16.55■□□□□ 0.24
ITGA5-208ENST00000551861 RXRBP28702 533 aa16.53■□□□□ 0.24
ITGA5-208ENST00000551861 SETD5Q9C0A6 1442 aa16.53■□□□□ 0.24
ITGA5-208ENST00000551861 PTCH1Q13635 1447 aa16.5■□□□□ 0.23
ITGA5-208ENST00000551861 C8orf37Q96NL8 207 aa16.49■□□□□ 0.23
ITGA5-208ENST00000551861 NHSL1Q5SYE7 1610 aa16.48■□□□□ 0.23
ITGA5-208ENST00000551861 AFF2P51816 1311 aa16.48■□□□□ 0.23
ITGA5-208ENST00000551861 DDX17Q92841 729 aaKnown RBP16.48■□□□□ 0.23
ITGA5-208ENST00000551861 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
ITGA5-208ENST00000551861 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
ITGA5-208ENST00000551861 NALCNQ8IZF0 1738 aa16.48■□□□□ 0.23
ITGA5-208ENST00000551861 CCDC144AA2RUR9 1427 aa16.47■□□□□ 0.23
ITGA5-208ENST00000551861 FOXD1Q16676 465 aa16.46■□□□□ 0.23
ITGA5-208ENST00000551861 ROBO2Q9HCK4 1378 aa16.46■□□□□ 0.23
ITGA5-208ENST00000551861 RGL3Q3MIN7 710 aa16.45■□□□□ 0.22
ITGA5-208ENST00000551861 NGLY1Q96IV0 654 aa16.45■□□□□ 0.22
ITGA5-208ENST00000551861 PNPLA6Q8IY17 1366 aa16.45■□□□□ 0.22
ITGA5-208ENST00000551861 ACIN1Q9UKV3 1341 aaKnown RBP16.45■□□□□ 0.22
ITGA5-208ENST00000551861 ORAI2Q96SN7 254 aa16.44■□□□□ 0.22
ITGA5-208ENST00000551861 PPLO60437 1756 aa16.43■□□□□ 0.22
ITGA5-208ENST00000551861 ADAMTS2O95450 1211 aa16.43■□□□□ 0.22
ITGA5-208ENST00000551861 MPHOSPH9Q99550 1183 aa16.43■□□□□ 0.22
ITGA5-208ENST00000551861 QTRT2Q9H974 415 aaKnown RBP16.43■□□□□ 0.22
ITGA5-208ENST00000551861 RBM6P78332 1123 aaKnown RBP16.42■□□□□ 0.22
ITGA5-208ENST00000551861 ESCO1Q5FWF5 840 aa16.42■□□□□ 0.22
ITGA5-208ENST00000551861 UPF1Q92900 1129 aaKnown RBP eCLIP16.42■□□□□ 0.22
ITGA5-208ENST00000551861 STK26Q9P289 416 aa16.42■□□□□ 0.22
ITGA5-208ENST00000551861 CDK12Q9NYV4 1490 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms