RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 RIMS2Q9UQ26 1411 aa30.66■■■□□ 2.5
SLC48A1-208ENST00000551301 KCNA6P17658 529 aa30.66■■■□□ 2.5
SLC48A1-208ENST00000551301 TMEM131LA2VDJ0 1609 aa30.65■■■□□ 2.5
SLC48A1-208ENST00000551301 MYO5BQ9ULV0 1848 aa30.63■■■□□ 2.49
SLC48A1-208ENST00000551301 PLEKHG1Q9ULL1 1385 aa30.63■■■□□ 2.49
SLC48A1-208ENST00000551301 ZFYVE9O95405 1425 aa30.63■■■□□ 2.49
SLC48A1-208ENST00000551301 HSPA1LP34931 641 aa30.62■■■□□ 2.49
SLC48A1-208ENST00000551301 NAIPQ13075 1403 aa30.59■■■□□ 2.49
SLC48A1-208ENST00000551301 PROSER2Q86WR7 435 aaPredicted RBP30.59■■■□□ 2.49
SLC48A1-208ENST00000551301 SENP3Q9H4L4 574 aaPredicted RBP30.57■■■□□ 2.48
SLC48A1-208ENST00000551301 TRIM52Q96A61 297 aa30.55■■■□□ 2.48
SLC48A1-208ENST00000551301 TMEM94Q12767 1356 aa30.54■■■□□ 2.48
SLC48A1-208ENST00000551301 NKTRP30414 1462 aaKnown RBP30.54■■■□□ 2.48
SLC48A1-208ENST00000551301 HFM1A2PYH4 1435 aa30.54■■■□□ 2.48
SLC48A1-208ENST00000551301 SPHKAPQ2M3C7 1700 aa30.53■■■□□ 2.48
SLC48A1-208ENST00000551301 TBX22Q9Y458 520 aa30.53■■■□□ 2.48
SLC48A1-208ENST00000551301 ALKQ9UM73 1620 aa30.52■■■□□ 2.48
SLC48A1-208ENST00000551301 NUTM2DQ5VT03 806 aaPredicted RBP30.51■■■□□ 2.47
SLC48A1-208ENST00000551301 ZNF326Q5BKZ1 582 aaKnown RBP30.5■■■□□ 2.47
SLC48A1-208ENST00000551301 XIRP1Q702N8 1843 aaKnown RBP30.49■■■□□ 2.47
SLC48A1-208ENST00000551301 NWD1Q149M9 1564 aa30.49■■■□□ 2.47
SLC48A1-208ENST00000551301 DIP2AQ14689 1571 aa30.45■■■□□ 2.46
SLC48A1-208ENST00000551301 MSH6P52701 1360 aa30.44■■■□□ 2.46
SLC48A1-208ENST00000551301 SLC4A1APQ9BWU0 796 aaKnown RBP30.43■■■□□ 2.46
SLC48A1-208ENST00000551301 CHD2O14647 1828 aaKnown RBP30.43■■■□□ 2.46
SLC48A1-208ENST00000551301 PIK3R4Q99570 1358 aa30.42■■■□□ 2.46
SLC48A1-208ENST00000551301 RBM33Q96EV2 1170 aaKnown RBP30.42■■■□□ 2.46
SLC48A1-208ENST00000551301 TRPM2O94759 1503 aa30.41■■■□□ 2.46
SLC48A1-208ENST00000551301 C14orf37Q86TY3 774 aa30.4■■■□□ 2.46
SLC48A1-208ENST00000551301 ADAMTS13Q76LX8 1427 aa30.39■■■□□ 2.46
SLC48A1-208ENST00000551301 FAM135BQ49AJ0 1406 aa30.39■■■□□ 2.45
SLC48A1-208ENST00000551301 ILDR2Q71H61 639 aa30.36■■■□□ 2.45
SLC48A1-208ENST00000551301 NCOA3Q9Y6Q9 1424 aa30.35■■■□□ 2.45
SLC48A1-208ENST00000551301 CLTCL1P53675 1640 aa30.35■■■□□ 2.45
SLC48A1-208ENST00000551301 KIF1BO60333 1816 aa30.34■■■□□ 2.45
SLC48A1-208ENST00000551301 MED1Q15648 1581 aaPredicted RBP30.32■■■□□ 2.45
SLC48A1-208ENST00000551301 ACIN1Q9UKV3 1341 aaKnown RBP30.32■■■□□ 2.44
SLC48A1-208ENST00000551301 SLAIN2Q9P270 581 aa30.31■■■□□ 2.44
SLC48A1-208ENST00000551301 AMOTL2Q9Y2J4 779 aa30.31■■■□□ 2.44
SLC48A1-208ENST00000551301 PHF23Q9BUL5 403 aaPredicted RBP30.3■■■□□ 2.44
SLC48A1-208ENST00000551301 SETBP1Q9Y6X0 1596 aa30.29■■■□□ 2.44
SLC48A1-208ENST00000551301 VGFO15240 615 aaPredicted RBP30.27■■■□□ 2.44
SLC48A1-208ENST00000551301 C19orf44Q9H6X5 657 aa30.27■■■□□ 2.44
SLC48A1-208ENST00000551301 ATF3P18847 181 aa30.26■■■□□ 2.43
SLC48A1-208ENST00000551301 CADPS2Q86UW7 1296 aa30.26■■■□□ 2.43
SLC48A1-208ENST00000551301 ROBO1Q9Y6N7 1651 aa30.26■■■□□ 2.43
SLC48A1-208ENST00000551301 SOCS7O14512 581 aa30.25■■■□□ 2.43
SLC48A1-208ENST00000551301 RPGRIP1LQ68CZ1 1315 aa30.24■■■□□ 2.43
SLC48A1-208ENST00000551301 NEXMIFQ5QGS0 1516 aa30.24■■■□□ 2.43
SLC48A1-208ENST00000551301 NRXN3Q9Y4C0 1643 aa30.22■■■□□ 2.43
SLC48A1-208ENST00000551301 MPHOSPH9Q99550 1183 aa30.2■■■□□ 2.43
SLC48A1-208ENST00000551301 PTPRUQ92729 1446 aa30.2■■■□□ 2.42
SLC48A1-208ENST00000551301 METP08581 1390 aa30.17■■■□□ 2.42
SLC48A1-208ENST00000551301 CCDC144AA2RUR9 1427 aa30.17■■■□□ 2.42
SLC48A1-208ENST00000551301 FOXD1Q16676 465 aa30.17■■■□□ 2.42
SLC48A1-208ENST00000551301 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.15■■■□□ 2.42
SLC48A1-208ENST00000551301 XRN1Q8IZH2 1706 aaKnown RBP30.14■■■□□ 2.42
SLC48A1-208ENST00000551301 SETD5Q9C0A6 1442 aa30.13■■■□□ 2.41
SLC48A1-208ENST00000551301 DCCP43146 1447 aa30.12■■■□□ 2.41
SLC48A1-208ENST00000551301 PHLPP1O60346 1717 aa30.1■■■□□ 2.41
SLC48A1-208ENST00000551301 PPLO60437 1756 aa30.06■■■□□ 2.4
SLC48A1-208ENST00000551301 RGL3Q3MIN7 710 aa30.06■■■□□ 2.4
SLC48A1-208ENST00000551301 JCADQ9P266 1359 aa30.05■■■□□ 2.4
SLC48A1-208ENST00000551301 ANKRD30BQ9BXX2 1392 aa30.03■■■□□ 2.4
SLC48A1-208ENST00000551301 ADGRL3Q9HAR2 1447 aa30.02■■■□□ 2.4
SLC48A1-208ENST00000551301 PTCH1Q13635 1447 aa30■■■□□ 2.39
SLC48A1-208ENST00000551301 BRINP3Q76B58 766 aa29.99■■■□□ 2.39
SLC48A1-208ENST00000551301 RAB3GAP2Q9H2M9 1393 aa29.99■■■□□ 2.39
SLC48A1-208ENST00000551301 SPATA31E1Q6ZUB1 1445 aa29.98■■■□□ 2.39
SLC48A1-208ENST00000551301 AHDC1Q5TGY3 1603 aaPredicted RBP29.96■■■□□ 2.39
SLC48A1-208ENST00000551301 SETD1AO15047 1707 aaKnown RBP29.96■■■□□ 2.39
SLC48A1-208ENST00000551301 COL16A1Q07092 1604 aaPredicted RBP29.96■■■□□ 2.39
SLC48A1-208ENST00000551301 MST1RQ04912 1400 aa29.95■■■□□ 2.38
SLC48A1-208ENST00000551301 ADGRF5Q8IZF2 1346 aa29.95■■■□□ 2.38
SLC48A1-208ENST00000551301 SPATA31A6Q5VVP1 1343 aa29.94■■■□□ 2.38
SLC48A1-208ENST00000551301 ROBO2Q9HCK4 1378 aa29.92■■■□□ 2.38
SLC48A1-208ENST00000551301 PRAG1Q86YV5 1406 aa29.92■■■□□ 2.38
SLC48A1-208ENST00000551301 ASXL1Q8IXJ9 1541 aa29.91■■■□□ 2.38
SLC48A1-208ENST00000551301 NALCNQ8IZF0 1738 aa29.91■■■□□ 2.38
SLC48A1-208ENST00000551301 MEX3CQ5U5Q3 659 aaKnown RBP29.88■■■□□ 2.37
SLC48A1-208ENST00000551301 RGS17Q9UGC6 210 aaPredicted RBP29.88■■■□□ 2.37
SLC48A1-208ENST00000551301 IFT172Q9UG01 1749 aa29.88■■■□□ 2.37
SLC48A1-208ENST00000551301 STK26Q9P289 416 aa29.86■■■□□ 2.37
SLC48A1-208ENST00000551301 HRCP23327 699 aa29.85■■■□□ 2.37
SLC48A1-208ENST00000551301 LRRC59Q96AG4 307 aaKnown RBP29.85■■■□□ 2.37
SLC48A1-208ENST00000551301 SHPRHQ149N8 1683 aa29.83■■■□□ 2.37
SLC48A1-208ENST00000551301 PIK3C2GO75747 1445 aa29.83■■■□□ 2.37
SLC48A1-208ENST00000551301 C1orf167Q5SNV9 1468 aa29.82■■■□□ 2.36
SLC48A1-208ENST00000551301 LRPPRCP42704 1394 aaKnown RBP29.82■■■□□ 2.36
SLC48A1-208ENST00000551301 NHSL1Q5SYE7 1610 aa29.8■■■□□ 2.36
SLC48A1-208ENST00000551301 ABCC11Q96J66 1382 aa29.79■■■□□ 2.36
SLC48A1-208ENST00000551301 TMEM132EQ6IEE7 984 aa29.79■■■□□ 2.36
SLC48A1-208ENST00000551301 TECPR2O15040 1411 aa29.78■■■□□ 2.36
SLC48A1-208ENST00000551301 NUTM2BA6NNL0 878 aaPredicted RBP29.77■■■□□ 2.36
SLC48A1-208ENST00000551301 NUTM2EB1AL46 878 aaPredicted RBP29.77■■■□□ 2.36
SLC48A1-208ENST00000551301 NUTM2AQ8IVF1 878 aaPredicted RBP29.77■■■□□ 2.36
SLC48A1-208ENST00000551301 MYOM2P54296 1465 aa29.76■■■□□ 2.35
SLC48A1-208ENST00000551301 POTEAQ6S8J7 498 aa29.76■■■□□ 2.35
SLC48A1-208ENST00000551301 C14orf93Q9H972 538 aaKnown RBP29.76■■■□□ 2.35
SLC48A1-208ENST00000551301 DHX57Q6P158 1386 aaKnown RBP29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms