RNA–Protein interactions for RNA: ENST00000550991.5

PPP1CC-206, Transcript of protein phosphatase 1 catalytic subunit gamma, human

TSL 2 BASIC

Gene PPP1CC, Length 1,882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1CC-206	ENST00000550991	HSPA2	P54652	639 aa		33.81	■■■■□ 3
PPP1CC-206	ENST00000550991	NEXMIF	Q5QGS0	1516 aa		33.8	■■■■□ 3
PPP1CC-206	ENST00000550991	KDM2A	Q9Y2K7	1162 aa		33.8	■■■■□ 3
PPP1CC-206	ENST00000550991	SLIT1	O75093	1534 aa		33.79	■■■■□ 3
PPP1CC-206	ENST00000550991	PPL	O60437	1756 aa		33.78	■■■■□ 3
PPP1CC-206	ENST00000550991	ARHGAP23	Q9P227	1491 aa		33.78	■■■■□ 3
PPP1CC-206	ENST00000550991	ZFYVE9	O95405	1425 aa		33.78	■■■■□ 3
PPP1CC-206	ENST00000550991	TIMELESS	Q9UNS1	1208 aa		33.77	■■■■□ 3
PPP1CC-206	ENST00000550991	IFT172	Q9UG01	1749 aa		33.77	■■■■□ 3
PPP1CC-206	ENST00000550991	HDGF	P51858	240 aa	Known RBP	33.76	■■■□□ 2.99
PPP1CC-206	ENST00000550991	EID1	Q9Y6B2	187 aa		33.76	■■■□□ 2.99
PPP1CC-206	ENST00000550991	TXNDC2	Q86VQ3	553 aa		33.75	■■■□□ 2.99
PPP1CC-206	ENST00000550991	PPP1R15A	O75807	674 aa	Predicted RBP	33.74	■■■□□ 2.99
PPP1CC-206	ENST00000550991	LTK	P29376	864 aa		33.74	■■■□□ 2.99
PPP1CC-206	ENST00000550991	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.74	■■■□□ 2.99
PPP1CC-206	ENST00000550991	VGF	O15240	615 aa	Predicted RBP	33.73	■■■□□ 2.99
PPP1CC-206	ENST00000550991	ANKLE2	Q86XL3	938 aa		33.71	■■■□□ 2.99
PPP1CC-206	ENST00000550991	SENP3	Q9H4L4	574 aa	Predicted RBP	33.7	■■■□□ 2.99
PPP1CC-206	ENST00000550991	ADGRF5	Q8IZF2	1346 aa		33.7	■■■□□ 2.99
PPP1CC-206	ENST00000550991	SCAF11	Q99590	1463 aa	Known RBP	33.69	■■■□□ 2.98
PPP1CC-206	ENST00000550991	MYOM2	P54296	1465 aa		33.68	■■■□□ 2.98
PPP1CC-206	ENST00000550991	STAC3	Q96MF2	364 aa		33.68	■■■□□ 2.98
PPP1CC-206	ENST00000550991	NCKAP5L	Q9HCH0	1330 aa		33.66	■■■□□ 2.98
PPP1CC-206	ENST00000550991	BCAN	Q96GW7	911 aa		33.62	■■■□□ 2.97
PPP1CC-206	ENST00000550991	POLR1A	O95602	1720 aa	Predicted RBP	33.61	■■■□□ 2.97
PPP1CC-206	ENST00000550991	NRXN1	Q9ULB1	1477 aa		33.6	■■■□□ 2.97
PPP1CC-206	ENST00000550991	PLEKHG1	Q9ULL1	1385 aa		33.6	■■■□□ 2.97
PPP1CC-206	ENST00000550991	PRAG1	Q86YV5	1406 aa		33.59	■■■□□ 2.97
PPP1CC-206	ENST00000550991	PIK3C2G	O75747	1445 aa		33.57	■■■□□ 2.96
PPP1CC-206	ENST00000550991	NBPF8	Q3BBV2	869 aa		33.57	■■■□□ 2.96
PPP1CC-206	ENST00000550991	STRC	Q7RTU9	1775 aa		33.55	■■■□□ 2.96
PPP1CC-206	ENST00000550991	ZEB1	P37275	1124 aa	Predicted RBP	33.55	■■■□□ 2.96
PPP1CC-206	ENST00000550991	NPHP4	O75161	1426 aa	Predicted RBP	33.54	■■■□□ 2.96
PPP1CC-206	ENST00000550991	MED14	O60244	1454 aa		33.53	■■■□□ 2.96
PPP1CC-206	ENST00000550991	IQGAP1	P46940	1657 aa		33.52	■■■□□ 2.96
PPP1CC-206	ENST00000550991	SETBP1	Q9Y6X0	1596 aa		33.51	■■■□□ 2.96
PPP1CC-206	ENST00000550991	NRXN3	Q9Y4C0	1643 aa		33.51	■■■□□ 2.95
PPP1CC-206	ENST00000550991	CFAP70	Q5T0N1	1121 aa		33.5	■■■□□ 2.95
PPP1CC-206	ENST00000550991	SLC26A8	Q96RN1	970 aa		33.5	■■■□□ 2.95
PPP1CC-206	ENST00000550991	C14orf93	Q9H972	538 aa	Known RBP	33.48	■■■□□ 2.95
PPP1CC-206	ENST00000550991	ADAMTS13	Q76LX8	1427 aa		33.48	■■■□□ 2.95
PPP1CC-206	ENST00000550991	ALK	Q9UM73	1620 aa		33.47	■■■□□ 2.95
PPP1CC-206	ENST00000550991	TRPM1	Q7Z4N2	1603 aa		33.43	■■■□□ 2.94
PPP1CC-206	ENST00000550991	LAMC1	P11047	1609 aa		33.42	■■■□□ 2.94
PPP1CC-206	ENST00000550991	NBPF1	Q3BBV0	1214 aa		33.42	■■■□□ 2.94
PPP1CC-206	ENST00000550991	TBX22	Q9Y458	520 aa		33.42	■■■□□ 2.94
PPP1CC-206	ENST00000550991	KIAA1210	Q9ULL0	1709 aa		33.4	■■■□□ 2.94
PPP1CC-206	ENST00000550991	TMEM132E	Q6IEE7	984 aa		33.39	■■■□□ 2.94
PPP1CC-206	ENST00000550991	SETD1A	O15047	1707 aa	Known RBP	33.39	■■■□□ 2.94
PPP1CC-206	ENST00000550991	DIP2A	Q14689	1571 aa		33.39	■■■□□ 2.94
PPP1CC-206	ENST00000550991	MET	P08581	1390 aa		33.38	■■■□□ 2.93
PPP1CC-206	ENST00000550991	RALGAPB	Q86X10	1494 aa		33.38	■■■□□ 2.93
PPP1CC-206	ENST00000550991	ROCK2	O75116	1388 aa	Known RBP	33.37	■■■□□ 2.93
PPP1CC-206	ENST00000550991	DMRT2	Q9Y5R5	561 aa		33.37	■■■□□ 2.93
PPP1CC-206	ENST00000550991	ASXL1	Q8IXJ9	1541 aa		33.34	■■■□□ 2.93
PPP1CC-206	ENST00000550991	ADGRB1	O14514	1584 aa		33.33	■■■□□ 2.93
PPP1CC-206	ENST00000550991	CARD11	Q9BXL7	1154 aa		33.29	■■■□□ 2.92
PPP1CC-206	ENST00000550991	STK26	Q9P289	416 aa		33.28	■■■□□ 2.92
PPP1CC-206	ENST00000550991	GPRASP1	Q5JY77	1395 aa		33.27	■■■□□ 2.92
PPP1CC-206	ENST00000550991	PIK3R4	Q99570	1358 aa		33.26	■■■□□ 2.92
PPP1CC-206	ENST00000550991	PTPRU	Q92729	1446 aa		33.26	■■■□□ 2.91
PPP1CC-206	ENST00000550991	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.26	■■■□□ 2.91
PPP1CC-206	ENST00000550991	AMOTL2	Q9Y2J4	779 aa		33.23	■■■□□ 2.91
PPP1CC-206	ENST00000550991	TRAK1	Q9UPV9	953 aa		33.22	■■■□□ 2.91
PPP1CC-206	ENST00000550991	LRPPRC	P42704	1394 aa	Known RBP	33.22	■■■□□ 2.91
PPP1CC-206	ENST00000550991	CHD2	O14647	1828 aa	Known RBP	33.21	■■■□□ 2.91
PPP1CC-206	ENST00000550991	KCNA6	P17658	529 aa		33.18	■■■□□ 2.9
PPP1CC-206	ENST00000550991	ABCC11	Q96J66	1382 aa		33.17	■■■□□ 2.9
PPP1CC-206	ENST00000550991	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.16	■■■□□ 2.9
PPP1CC-206	ENST00000550991	XRN1	Q8IZH2	1706 aa	Known RBP	33.15	■■■□□ 2.9
PPP1CC-206	ENST00000550991	TECPR2	O15040	1411 aa		33.13	■■■□□ 2.89
PPP1CC-206	ENST00000550991	NWD1	Q149M9	1564 aa		33.13	■■■□□ 2.89
PPP1CC-206	ENST00000550991	USP47	Q96K76	1375 aa		33.12	■■■□□ 2.89
PPP1CC-206	ENST00000550991	KNDC1	Q76NI1	1749 aa		33.12	■■■□□ 2.89
PPP1CC-206	ENST00000550991	STRCP1	A6NGW2	1772 aa		33.12	■■■□□ 2.89
PPP1CC-206	ENST00000550991	ROBO2	Q9HCK4	1378 aa		33.11	■■■□□ 2.89
PPP1CC-206	ENST00000550991	ARHGEF28	Q8N1W1	1705 aa	Known RBP	33.1	■■■□□ 2.89
PPP1CC-206	ENST00000550991	CPS1	P31327	1500 aa		33.09	■■■□□ 2.89
PPP1CC-206	ENST00000550991	DLC1	Q96QB1	1528 aa		33.09	■■■□□ 2.89
PPP1CC-206	ENST00000550991	WAPL	Q7Z5K2	1190 aa		33.08	■■■□□ 2.89
PPP1CC-206	ENST00000550991	PRAM1	Q96QH2	718 aa		33.08	■■■□□ 2.89
PPP1CC-206	ENST00000550991	EIF3A	Q14152	1382 aa	Known RBP	33.08	■■■□□ 2.89
PPP1CC-206	ENST00000550991	PTCH1	Q13635	1447 aa		33.07	■■■□□ 2.89
PPP1CC-206	ENST00000550991	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.07	■■■□□ 2.88
PPP1CC-206	ENST00000550991	POGK	Q9P215	609 aa		33.07	■■■□□ 2.88
PPP1CC-206	ENST00000550991	SAFB2	Q14151	953 aa	Known RBP eCLIP	33.05	■■■□□ 2.88
PPP1CC-206	ENST00000550991	SIRT1	Q96EB6	747 aa		33.05	■■■□□ 2.88
PPP1CC-206	ENST00000550991	PLEKHH1	Q9ULM0	1364 aa		33.05	■■■□□ 2.88
PPP1CC-206	ENST00000550991	NKTR	P30414	1462 aa	Known RBP	33.05	■■■□□ 2.88
PPP1CC-206	ENST00000550991	FAM135B	Q49AJ0	1406 aa		33.04	■■■□□ 2.88
PPP1CC-206	ENST00000550991	ST20-MTHFS	A0A0A6YYL1	179 aa		33.03	■■■□□ 2.88
PPP1CC-206	ENST00000550991	HSPA5	P11021	654 aa	Known RBP	33.03	■■■□□ 2.88
PPP1CC-206	ENST00000550991	PROSER2	Q86WR7	435 aa	Predicted RBP	33.03	■■■□□ 2.88
PPP1CC-206	ENST00000550991	RBM33	Q96EV2	1170 aa	Known RBP	33.03	■■■□□ 2.88
PPP1CC-206	ENST00000550991	CENPJ	Q9HC77	1338 aa	Predicted RBP	33.02	■■■□□ 2.88
PPP1CC-206	ENST00000550991	HIRIP3	Q9BW71	556 aa	Predicted RBP	33.01	■■■□□ 2.87
PPP1CC-206	ENST00000550991	QRICH2	Q9H0J4	1663 aa		32.96	■■■□□ 2.87
PPP1CC-206	ENST00000550991	TMEM94	Q12767	1356 aa		32.94	■■■□□ 2.86
PPP1CC-206	ENST00000550991	LTBP4	Q8N2S1	1624 aa		32.94	■■■□□ 2.86
PPP1CC-206	ENST00000550991	LRRC7	Q96NW7	1537 aa		32.93	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms