RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 NOS1P29475 1434 aa17.89■□□□□ 0.46
ERBB3-216ENST00000550869 ADGRB3O60242 1522 aa17.89■□□□□ 0.45
ERBB3-216ENST00000550869 XIRP1Q702N8 1843 aaKnown RBP17.88■□□□□ 0.45
ERBB3-216ENST00000550869 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
ERBB3-216ENST00000550869 IDI1Q13907 227 aa17.86■□□□□ 0.45
ERBB3-216ENST00000550869 TET3O43151 1660 aa17.86■□□□□ 0.45
ERBB3-216ENST00000550869 NUP155O75694 1391 aa17.83■□□□□ 0.45
ERBB3-216ENST00000550869 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
ERBB3-216ENST00000550869 MPHOSPH9Q99550 1183 aa17.83■□□□□ 0.44
ERBB3-216ENST00000550869 IQGAP3Q86VI3 1631 aa17.83■□□□□ 0.44
ERBB3-216ENST00000550869 NKTRP30414 1462 aaKnown RBP17.82■□□□□ 0.44
ERBB3-216ENST00000550869 CLSPNQ9HAW4 1339 aa17.81■□□□□ 0.44
ERBB3-216ENST00000550869 NWD1Q149M9 1564 aa17.81■□□□□ 0.44
ERBB3-216ENST00000550869 KCNA6P17658 529 aa17.79■□□□□ 0.44
ERBB3-216ENST00000550869 MYO5BQ9ULV0 1848 aa17.78■□□□□ 0.44
ERBB3-216ENST00000550869 PHF23Q9BUL5 403 aaPredicted RBP17.78■□□□□ 0.44
ERBB3-216ENST00000550869 FAM135BQ49AJ0 1406 aa17.78■□□□□ 0.44
ERBB3-216ENST00000550869 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
ERBB3-216ENST00000550869 HDGFP51858 240 aaKnown RBP17.77■□□□□ 0.44
ERBB3-216ENST00000550869 CCER1Q8TC90 406 aaPredicted RBP17.77■□□□□ 0.44
ERBB3-216ENST00000550869 SLC4A1APQ9BWU0 796 aaKnown RBP17.77■□□□□ 0.44
ERBB3-216ENST00000550869 TMEM131LA2VDJ0 1609 aa17.76■□□□□ 0.43
ERBB3-216ENST00000550869 ZFYVE9O95405 1425 aa17.76■□□□□ 0.43
ERBB3-216ENST00000550869 SLC26A8Q96RN1 970 aa17.75■□□□□ 0.43
ERBB3-216ENST00000550869 PLEKHG1Q9ULL1 1385 aa17.75■□□□□ 0.43
ERBB3-216ENST00000550869 E9PCH4 1651 aa17.74■□□□□ 0.43
ERBB3-216ENST00000550869 CHD2O14647 1828 aaKnown RBP17.74■□□□□ 0.43
ERBB3-216ENST00000550869 ROBO1Q9Y6N7 1651 aa17.73■□□□□ 0.43
ERBB3-216ENST00000550869 RIMS2Q9UQ26 1411 aa17.72■□□□□ 0.43
ERBB3-216ENST00000550869 PROSER2Q86WR7 435 aaPredicted RBP17.72■□□□□ 0.43
ERBB3-216ENST00000550869 ANKRD30BQ9BXX2 1392 aa17.71■□□□□ 0.43
ERBB3-216ENST00000550869 BCANQ96GW7 911 aa17.71■□□□□ 0.43
ERBB3-216ENST00000550869 DIP2AQ14689 1571 aa17.7■□□□□ 0.42
ERBB3-216ENST00000550869 MSH6P52701 1360 aa17.7■□□□□ 0.42
ERBB3-216ENST00000550869 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
ERBB3-216ENST00000550869 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.7■□□□□ 0.42
ERBB3-216ENST00000550869 SENP3Q9H4L4 574 aaPredicted RBP17.69■□□□□ 0.42
ERBB3-216ENST00000550869 NCOA3Q9Y6Q9 1424 aa17.68■□□□□ 0.42
ERBB3-216ENST00000550869 FOXD1Q16676 465 aa17.67■□□□□ 0.42
ERBB3-216ENST00000550869 TBX22Q9Y458 520 aa17.67■□□□□ 0.42
ERBB3-216ENST00000550869 PIK3R4Q99570 1358 aa17.66■□□□□ 0.42
ERBB3-216ENST00000550869 PHLPP1O60346 1717 aa17.63■□□□□ 0.41
ERBB3-216ENST00000550869 SPHKAPQ2M3C7 1700 aa17.63■□□□□ 0.41
ERBB3-216ENST00000550869 ADAMTS13Q76LX8 1427 aa17.63■□□□□ 0.41
ERBB3-216ENST00000550869 SLAIN2Q9P270 581 aa17.62■□□□□ 0.41
ERBB3-216ENST00000550869 TRPM2O94759 1503 aa17.62■□□□□ 0.41
ERBB3-216ENST00000550869 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
ERBB3-216ENST00000550869 RBM33Q96EV2 1170 aaKnown RBP17.61■□□□□ 0.41
ERBB3-216ENST00000550869 SIN3AQ96ST3 1273 aa17.61■□□□□ 0.41
ERBB3-216ENST00000550869 RGS17Q9UGC6 210 aaPredicted RBP17.59■□□□□ 0.41
ERBB3-216ENST00000550869 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.41
ERBB3-216ENST00000550869 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
ERBB3-216ENST00000550869 JCADQ9P266 1359 aa17.57■□□□□ 0.4
ERBB3-216ENST00000550869 CADPS2Q86UW7 1296 aa17.57■□□□□ 0.4
ERBB3-216ENST00000550869 TIMELESSQ9UNS1 1208 aa17.57■□□□□ 0.4
ERBB3-216ENST00000550869 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
ERBB3-216ENST00000550869 SETBP1Q9Y6X0 1596 aa17.57■□□□□ 0.4
ERBB3-216ENST00000550869 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
ERBB3-216ENST00000550869 C14orf37Q86TY3 774 aa17.55■□□□□ 0.4
ERBB3-216ENST00000550869 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
ERBB3-216ENST00000550869 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
ERBB3-216ENST00000550869 XRN1Q8IZH2 1706 aaKnown RBP17.54■□□□□ 0.4
ERBB3-216ENST00000550869 DCCP43146 1447 aa17.54■□□□□ 0.4
ERBB3-216ENST00000550869 ATF3P18847 181 aa17.53■□□□□ 0.4
ERBB3-216ENST00000550869 CCDC144AA2RUR9 1427 aa17.53■□□□□ 0.4
ERBB3-216ENST00000550869 NEUROD1Q13562 356 aa17.52■□□□□ 0.4
ERBB3-216ENST00000550869 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
ERBB3-216ENST00000550869 SHPRHQ149N8 1683 aa17.52■□□□□ 0.39
ERBB3-216ENST00000550869 AMOTL2Q9Y2J4 779 aa17.51■□□□□ 0.39
ERBB3-216ENST00000550869 KIF1BO60333 1816 aa17.51■□□□□ 0.39
ERBB3-216ENST00000550869 CLTCL1P53675 1640 aa17.5■□□□□ 0.39
ERBB3-216ENST00000550869 SPATA31A6Q5VVP1 1343 aa17.5■□□□□ 0.39
ERBB3-216ENST00000550869 PTPRUQ92729 1446 aa17.5■□□□□ 0.39
ERBB3-216ENST00000550869 SPATA31E1Q6ZUB1 1445 aa17.49■□□□□ 0.39
ERBB3-216ENST00000550869 NEXMIFQ5QGS0 1516 aa17.48■□□□□ 0.39
ERBB3-216ENST00000550869 POTEAQ6S8J7 498 aa17.48■□□□□ 0.39
ERBB3-216ENST00000550869 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
ERBB3-216ENST00000550869 NHSL1Q5SYE7 1610 aa17.44■□□□□ 0.38
ERBB3-216ENST00000550869 TONSLQ96HA7 1378 aa17.44■□□□□ 0.38
ERBB3-216ENST00000550869 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
ERBB3-216ENST00000550869 ASXL1Q8IXJ9 1541 aa17.43■□□□□ 0.38
ERBB3-216ENST00000550869 BRINP3Q76B58 766 aa17.43■□□□□ 0.38
ERBB3-216ENST00000550869 LRP6O75581 1613 aa17.43■□□□□ 0.38
ERBB3-216ENST00000550869 METP08581 1390 aa17.42■□□□□ 0.38
ERBB3-216ENST00000550869 MST1RQ04912 1400 aa17.42■□□□□ 0.38
ERBB3-216ENST00000550869 ADGRL3Q9HAR2 1447 aa17.42■□□□□ 0.38
ERBB3-216ENST00000550869 NALCNQ8IZF0 1738 aa17.41■□□□□ 0.38
ERBB3-216ENST00000550869 ZNF772Q68DY9 489 aaPredicted RBP17.41■□□□□ 0.38
ERBB3-216ENST00000550869 MEX3CQ5U5Q3 659 aaKnown RBP17.4■□□□□ 0.38
ERBB3-216ENST00000550869 SETD1AO15047 1707 aaKnown RBP17.4■□□□□ 0.38
ERBB3-216ENST00000550869 PTCH1Q13635 1447 aa17.39■□□□□ 0.38
ERBB3-216ENST00000550869 STAC3Q96MF2 364 aa17.39■□□□□ 0.37
ERBB3-216ENST00000550869 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
ERBB3-216ENST00000550869 VGFO15240 615 aaPredicted RBP17.38■□□□□ 0.37
ERBB3-216ENST00000550869 RPGRIP1LQ68CZ1 1315 aa17.38■□□□□ 0.37
ERBB3-216ENST00000550869 PPLO60437 1756 aa17.36■□□□□ 0.37
ERBB3-216ENST00000550869 RGL3Q3MIN7 710 aa17.36■□□□□ 0.37
ERBB3-216ENST00000550869 LAMC1P11047 1609 aa17.36■□□□□ 0.37
ERBB3-216ENST00000550869 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
ERBB3-216ENST00000550869 IFT172Q9UG01 1749 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms