RNA–Protein interactions for RNA: ENST00000550846.5

PFDN5-211, Transcript of prefoldin subunit 5, humanhuman

TSL 2 BASIC

Gene PFDN5, Length 392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-211ENST00000550846 ROBO1Q9Y6N7 1651 aa12.42□□□□□ -0.42
PFDN5-211ENST00000550846 FAM135BQ49AJ0 1406 aa12.4□□□□□ -0.42
PFDN5-211ENST00000550846 ITGAEP38570 1179 aa12.4□□□□□ -0.42
PFDN5-211ENST00000550846 SLC52A1Q9NWF4 448 aa12.4□□□□□ -0.42
PFDN5-211ENST00000550846 KDM5AP29375 1690 aaKnown RBP12.4□□□□□ -0.42
PFDN5-211ENST00000550846 GCC2Q8IWJ2 1684 aa12.39□□□□□ -0.43
PFDN5-211ENST00000550846 RIMS2Q9UQ26 1411 aa12.39□□□□□ -0.43
PFDN5-211ENST00000550846 PPARGC1BQ86YN6 1023 aaKnown RBP12.39□□□□□ -0.43
PFDN5-211ENST00000550846 MSH6P52701 1360 aa12.39□□□□□ -0.43
PFDN5-211ENST00000550846 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
PFDN5-211ENST00000550846 MYO5BQ9ULV0 1848 aa12.39□□□□□ -0.43
PFDN5-211ENST00000550846 NWD1Q149M9 1564 aa12.39□□□□□ -0.43
PFDN5-211ENST00000550846 ZFYVE9O95405 1425 aa12.38□□□□□ -0.43
PFDN5-211ENST00000550846 C14orf37Q86TY3 774 aa12.38□□□□□ -0.43
PFDN5-211ENST00000550846 POTEAQ6S8J7 498 aa12.37□□□□□ -0.43
PFDN5-211ENST00000550846 RPRD2Q5VT52 1461 aaKnown RBP12.36□□□□□ -0.43
PFDN5-211ENST00000550846 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
PFDN5-211ENST00000550846 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
PFDN5-211ENST00000550846 TMEM131LA2VDJ0 1609 aa12.35□□□□□ -0.43
PFDN5-211ENST00000550846 UNC13BO14795 1591 aa12.35□□□□□ -0.43
PFDN5-211ENST00000550846 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
PFDN5-211ENST00000550846 E9PCH4 1651 aa12.33□□□□□ -0.44
PFDN5-211ENST00000550846 NUP155O75694 1391 aa12.31□□□□□ -0.44
PFDN5-211ENST00000550846 ADAMTS13Q76LX8 1427 aa12.31□□□□□ -0.44
PFDN5-211ENST00000550846 HDGFP51858 240 aaKnown RBP12.31□□□□□ -0.44
PFDN5-211ENST00000550846 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
PFDN5-211ENST00000550846 SETD1AO15047 1707 aaKnown RBP12.31□□□□□ -0.44
PFDN5-211ENST00000550846 CHD2O14647 1828 aaKnown RBP12.3□□□□□ -0.44
PFDN5-211ENST00000550846 TBX22Q9Y458 520 aa12.3□□□□□ -0.44
PFDN5-211ENST00000550846 JCADQ9P266 1359 aa12.3□□□□□ -0.44
PFDN5-211ENST00000550846 IQGAP3Q86VI3 1631 aa12.29□□□□□ -0.44
PFDN5-211ENST00000550846 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
PFDN5-211ENST00000550846 ATF3P18847 181 aa12.28□□□□□ -0.44
PFDN5-211ENST00000550846 LRP6O75581 1613 aa12.28□□□□□ -0.44
PFDN5-211ENST00000550846 COL16A1Q07092 1604 aaPredicted RBP12.28□□□□□ -0.44
PFDN5-211ENST00000550846 ROCK1Q13464 1354 aa12.28□□□□□ -0.44
PFDN5-211ENST00000550846 PTPRUQ92729 1446 aa12.28□□□□□ -0.44
PFDN5-211ENST00000550846 ZNF326Q5BKZ1 582 aaKnown RBP12.27□□□□□ -0.45
PFDN5-211ENST00000550846 AMOTL2Q9Y2J4 779 aa12.27□□□□□ -0.45
PFDN5-211ENST00000550846 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.26□□□□□ -0.45
PFDN5-211ENST00000550846 NUTM2BA6NNL0 878 aaPredicted RBP12.26□□□□□ -0.45
PFDN5-211ENST00000550846 NUTM2EB1AL46 878 aaPredicted RBP12.26□□□□□ -0.45
PFDN5-211ENST00000550846 NUTM2AQ8IVF1 878 aaPredicted RBP12.26□□□□□ -0.45
PFDN5-211ENST00000550846 TRPM2O94759 1503 aa12.26□□□□□ -0.45
PFDN5-211ENST00000550846 DIP2AQ14689 1571 aa12.26□□□□□ -0.45
PFDN5-211ENST00000550846 CADPS2Q86UW7 1296 aa12.25□□□□□ -0.45
PFDN5-211ENST00000550846 TRIM52Q96A61 297 aa12.25□□□□□ -0.45
PFDN5-211ENST00000550846 C19orf44Q9H6X5 657 aa12.25□□□□□ -0.45
PFDN5-211ENST00000550846 BRINP3Q76B58 766 aa12.24□□□□□ -0.45
PFDN5-211ENST00000550846 AHDC1Q5TGY3 1603 aaPredicted RBP12.22□□□□□ -0.45
PFDN5-211ENST00000550846 NCOA3Q9Y6Q9 1424 aa12.22□□□□□ -0.45
PFDN5-211ENST00000550846 PIK3R4Q99570 1358 aa12.22□□□□□ -0.45
PFDN5-211ENST00000550846 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
PFDN5-211ENST00000550846 NRXN3Q9Y4C0 1643 aa12.22□□□□□ -0.45
PFDN5-211ENST00000550846 METP08581 1390 aa12.21□□□□□ -0.45
PFDN5-211ENST00000550846 SPATA31A6Q5VVP1 1343 aa12.21□□□□□ -0.45
PFDN5-211ENST00000550846 SPHKAPQ2M3C7 1700 aa12.21□□□□□ -0.45
PFDN5-211ENST00000550846 ASXL1Q8IXJ9 1541 aa12.21□□□□□ -0.46
PFDN5-211ENST00000550846 XRN1Q8IZH2 1706 aaKnown RBP12.2□□□□□ -0.46
PFDN5-211ENST00000550846 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
PFDN5-211ENST00000550846 SETBP1Q9Y6X0 1596 aa12.19□□□□□ -0.46
PFDN5-211ENST00000550846 SHPRHQ149N8 1683 aa12.19□□□□□ -0.46
PFDN5-211ENST00000550846 MST1RQ04912 1400 aa12.19□□□□□ -0.46
PFDN5-211ENST00000550846 ZNF772Q68DY9 489 aaPredicted RBP12.18□□□□□ -0.46
PFDN5-211ENST00000550846 DCCP43146 1447 aa12.17□□□□□ -0.46
PFDN5-211ENST00000550846 NEXMIFQ5QGS0 1516 aa12.16□□□□□ -0.46
PFDN5-211ENST00000550846 AFF2P51816 1311 aa12.16□□□□□ -0.46
PFDN5-211ENST00000550846 C8orf37Q96NL8 207 aa12.16□□□□□ -0.46
PFDN5-211ENST00000550846 NALCNQ8IZF0 1738 aa12.15□□□□□ -0.46
PFDN5-211ENST00000550846 ADGRL3Q9HAR2 1447 aa12.15□□□□□ -0.46
PFDN5-211ENST00000550846 RXRBP28702 533 aa12.15□□□□□ -0.46
PFDN5-211ENST00000550846 NAIPQ13075 1403 aa12.14□□□□□ -0.47
PFDN5-211ENST00000550846 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
PFDN5-211ENST00000550846 NHSL1Q5SYE7 1610 aa12.13□□□□□ -0.47
PFDN5-211ENST00000550846 ADAMTS2O95450 1211 aa12.13□□□□□ -0.47
PFDN5-211ENST00000550846 PNPLA6Q8IY17 1366 aa12.13□□□□□ -0.47
PFDN5-211ENST00000550846 SETD5Q9C0A6 1442 aa12.12□□□□□ -0.47
PFDN5-211ENST00000550846 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
PFDN5-211ENST00000550846 ROBO2Q9HCK4 1378 aa12.12□□□□□ -0.47
PFDN5-211ENST00000550846 C1orf167Q5SNV9 1468 aa12.11□□□□□ -0.47
PFDN5-211ENST00000550846 FOXD1Q16676 465 aa12.11□□□□□ -0.47
PFDN5-211ENST00000550846 ORAI2Q96SN7 254 aa12.11□□□□□ -0.47
PFDN5-211ENST00000550846 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
PFDN5-211ENST00000550846 KIF1BO60333 1816 aa12.1□□□□□ -0.47
PFDN5-211ENST00000550846 SLC4A1APQ9BWU0 796 aaKnown RBP12.1□□□□□ -0.47
PFDN5-211ENST00000550846 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
PFDN5-211ENST00000550846 RGS12O14924 1447 aa12.09□□□□□ -0.47
PFDN5-211ENST00000550846 VGFO15240 615 aaPredicted RBP12.08□□□□□ -0.48
PFDN5-211ENST00000550846 NGLY1Q96IV0 654 aa12.08□□□□□ -0.48
PFDN5-211ENST00000550846 PTCH1Q13635 1447 aa12.08□□□□□ -0.48
PFDN5-211ENST00000550846 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
PFDN5-211ENST00000550846 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
PFDN5-211ENST00000550846 HFM1A2PYH4 1435 aa12.06□□□□□ -0.48
PFDN5-211ENST00000550846 RGL3Q3MIN7 710 aa12.06□□□□□ -0.48
PFDN5-211ENST00000550846 STK26Q9P289 416 aa12.06□□□□□ -0.48
PFDN5-211ENST00000550846 RBM6P78332 1123 aaKnown RBP12.05□□□□□ -0.48
PFDN5-211ENST00000550846 CDK12Q9NYV4 1490 aaPredicted RBP12.05□□□□□ -0.48
PFDN5-211ENST00000550846 ESCO1Q5FWF5 840 aa12.04□□□□□ -0.48
PFDN5-211ENST00000550846 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
PFDN5-211ENST00000550846 PPLO60437 1756 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms