RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 NUTM2DQ5VT03 806 aaPredicted RBP25.12■■□□□ 1.61
BRF1-217ENST00000550375 EID1Q9Y6B2 187 aa25.12■■□□□ 1.61
BRF1-217ENST00000550375 ZFYVE9O95405 1425 aa25.1■■□□□ 1.61
BRF1-217ENST00000550375 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
BRF1-217ENST00000550375 SCAF11Q99590 1463 aaKnown RBP25.1■■□□□ 1.61
BRF1-217ENST00000550375 NEURL4Q96JN8 1562 aa25.09■■□□□ 1.61
BRF1-217ENST00000550375 SENP3Q9H4L4 574 aaPredicted RBP25.09■■□□□ 1.61
BRF1-217ENST00000550375 PPP1R15AO75807 674 aaPredicted RBP25.07■■□□□ 1.6
BRF1-217ENST00000550375 SIN3AQ96ST3 1273 aa25.07■■□□□ 1.6
BRF1-217ENST00000550375 HDGFP51858 240 aaKnown RBP25.06■■□□□ 1.6
BRF1-217ENST00000550375 NEXMIFQ5QGS0 1516 aa25.06■■□□□ 1.6
BRF1-217ENST00000550375 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.05■■□□□ 1.6
BRF1-217ENST00000550375 NPHP4O75161 1426 aaPredicted RBP25.05■■□□□ 1.6
BRF1-217ENST00000550375 NEUROD1Q13562 356 aa25.05■■□□□ 1.6
BRF1-217ENST00000550375 PPLO60437 1756 aa25.04■■□□□ 1.6
BRF1-217ENST00000550375 IQGAP1P46940 1657 aa25.04■■□□□ 1.6
BRF1-217ENST00000550375 BCANQ96GW7 911 aa25.03■■□□□ 1.6
BRF1-217ENST00000550375 DMRT2Q9Y5R5 561 aa25.03■■□□□ 1.6
BRF1-217ENST00000550375 MED14O60244 1454 aa25.02■■□□□ 1.6
BRF1-217ENST00000550375 RPGRIP1LQ68CZ1 1315 aa25.02■■□□□ 1.6
BRF1-217ENST00000550375 IFT172Q9UG01 1749 aa25.01■■□□□ 1.59
BRF1-217ENST00000550375 CCER1Q8TC90 406 aaPredicted RBP25■■□□□ 1.59
BRF1-217ENST00000550375 CERKQ8TCT0 537 aa24.99■■□□□ 1.59
BRF1-217ENST00000550375 PLEKHG1Q9ULL1 1385 aa24.98■■□□□ 1.59
BRF1-217ENST00000550375 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
BRF1-217ENST00000550375 SLC26A8Q96RN1 970 aa24.94■■□□□ 1.58
BRF1-217ENST00000550375 DCAF11Q8TEB1 546 aa24.93■■□□□ 1.58
BRF1-217ENST00000550375 KDM2AQ9Y2K7 1162 aa24.93■■□□□ 1.58
BRF1-217ENST00000550375 ADGRF5Q8IZF2 1346 aa24.92■■□□□ 1.58
BRF1-217ENST00000550375 NRXN3Q9Y4C0 1643 aa24.9■■□□□ 1.58
BRF1-217ENST00000550375 SETBP1Q9Y6X0 1596 aa24.88■■□□□ 1.57
BRF1-217ENST00000550375 ADAMTS13Q76LX8 1427 aa24.87■■□□□ 1.57
BRF1-217ENST00000550375 MYOM2P54296 1465 aa24.87■■□□□ 1.57
BRF1-217ENST00000550375 L3MBTL2Q969R5 705 aa24.87■■□□□ 1.57
BRF1-217ENST00000550375 CLSPNQ9HAW4 1339 aa24.87■■□□□ 1.57
BRF1-217ENST00000550375 ZNF335Q9H4Z2 1342 aaPredicted RBP24.85■■□□□ 1.57
BRF1-217ENST00000550375 TONSLQ96HA7 1378 aa24.84■■□□□ 1.57
BRF1-217ENST00000550375 DIP2AQ14689 1571 aa24.84■■□□□ 1.57
BRF1-217ENST00000550375 TBX22Q9Y458 520 aa24.83■■□□□ 1.57
BRF1-217ENST00000550375 ALKQ9UM73 1620 aa24.82■■□□□ 1.56
BRF1-217ENST00000550375 NRXN1Q9ULB1 1477 aa24.82■■□□□ 1.56
BRF1-217ENST00000550375 PIK3C2GO75747 1445 aa24.82■■□□□ 1.56
BRF1-217ENST00000550375 STAC3Q96MF2 364 aa24.8■■□□□ 1.56
BRF1-217ENST00000550375 STRCP1A6NGW2 1772 aa24.8■■□□□ 1.56
BRF1-217ENST00000550375 SETD1AO15047 1707 aaKnown RBP24.8■■□□□ 1.56
BRF1-217ENST00000550375 CHD2O14647 1828 aaKnown RBP24.79■■□□□ 1.56
BRF1-217ENST00000550375 METP08581 1390 aa24.78■■□□□ 1.56
BRF1-217ENST00000550375 CFAP70Q5T0N1 1121 aa24.77■■□□□ 1.56
BRF1-217ENST00000550375 C14orf93Q9H972 538 aaKnown RBP24.75■■□□□ 1.55
BRF1-217ENST00000550375 LAMC1P11047 1609 aa24.74■■□□□ 1.55
BRF1-217ENST00000550375 LTBP4Q8N2S1 1624 aa24.74■■□□□ 1.55
BRF1-217ENST00000550375 KCNA6P17658 529 aa24.74■■□□□ 1.55
BRF1-217ENST00000550375 PRAG1Q86YV5 1406 aa24.73■■□□□ 1.55
BRF1-217ENST00000550375 PTPRUQ92729 1446 aa24.73■■□□□ 1.55
BRF1-217ENST00000550375 TMEM132EQ6IEE7 984 aa24.73■■□□□ 1.55
BRF1-217ENST00000550375 PIK3R4Q99570 1358 aa24.73■■□□□ 1.55
BRF1-217ENST00000550375 AMOTL2Q9Y2J4 779 aa24.71■■□□□ 1.55
BRF1-217ENST00000550375 NWD1Q149M9 1564 aa24.71■■□□□ 1.55
BRF1-217ENST00000550375 ASXL1Q8IXJ9 1541 aa24.7■■□□□ 1.54
BRF1-217ENST00000550375 CPS1P31327 1500 aa24.68■■□□□ 1.54
BRF1-217ENST00000550375 XRN1Q8IZH2 1706 aaKnown RBP24.68■■□□□ 1.54
BRF1-217ENST00000550375 STK26Q9P289 416 aa24.67■■□□□ 1.54
BRF1-217ENST00000550375 KIAA1210Q9ULL0 1709 aa24.67■■□□□ 1.54
BRF1-217ENST00000550375 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
BRF1-217ENST00000550375 TIMELESSQ9UNS1 1208 aa24.66■■□□□ 1.54
BRF1-217ENST00000550375 PROSER2Q86WR7 435 aaPredicted RBP24.65■■□□□ 1.54
BRF1-217ENST00000550375 RBM33Q96EV2 1170 aaKnown RBP24.65■■□□□ 1.54
BRF1-217ENST00000550375 TRPM1Q7Z4N2 1603 aa24.64■■□□□ 1.54
BRF1-217ENST00000550375 NKTRP30414 1462 aaKnown RBP24.64■■□□□ 1.53
BRF1-217ENST00000550375 LRRC7Q96NW7 1537 aa24.64■■□□□ 1.53
BRF1-217ENST00000550375 ADGRB1O14514 1584 aa24.63■■□□□ 1.53
BRF1-217ENST00000550375 NBPF1Q3BBV0 1214 aa24.63■■□□□ 1.53
BRF1-217ENST00000550375 YTHDC2Q9H6S0 1430 aaKnown RBP24.62■■□□□ 1.53
BRF1-217ENST00000550375 XIRP1Q702N8 1843 aaKnown RBP24.62■■□□□ 1.53
BRF1-217ENST00000550375 LRPPRCP42704 1394 aaKnown RBP24.62■■□□□ 1.53
BRF1-217ENST00000550375 TMEM94Q12767 1356 aa24.59■■□□□ 1.53
BRF1-217ENST00000550375 KNDC1Q76NI1 1749 aa24.59■■□□□ 1.53
BRF1-217ENST00000550375 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
BRF1-217ENST00000550375 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
BRF1-217ENST00000550375 TRAK1Q9UPV9 953 aa24.56■■□□□ 1.52
BRF1-217ENST00000550375 ROCK2O75116 1388 aaKnown RBP24.56■■□□□ 1.52
BRF1-217ENST00000550375 PTCH1Q13635 1447 aa24.55■■□□□ 1.52
BRF1-217ENST00000550375 C14orf37Q86TY3 774 aa24.54■■□□□ 1.52
BRF1-217ENST00000550375 TECPR2O15040 1411 aa24.54■■□□□ 1.52
BRF1-217ENST00000550375 RALGAPBQ86X10 1494 aa24.53■■□□□ 1.52
BRF1-217ENST00000550375 WAPLQ7Z5K2 1190 aa24.53■■□□□ 1.52
BRF1-217ENST00000550375 ILDR2Q71H61 639 aa24.51■■□□□ 1.51
BRF1-217ENST00000550375 PLEKHH1Q9ULM0 1364 aa24.51■■□□□ 1.51
BRF1-217ENST00000550375 ARHGEF28Q8N1W1 1705 aaKnown RBP24.5■■□□□ 1.51
BRF1-217ENST00000550375 DLC1Q96QB1 1528 aa24.5■■□□□ 1.51
BRF1-217ENST00000550375 DISP3Q9P2K9 1392 aa24.5■■□□□ 1.51
BRF1-217ENST00000550375 IQSEC2Q5JU85 1478 aa24.5■■□□□ 1.51
BRF1-217ENST00000550375 SAFB2Q14151 953 aaKnown RBP eCLIP24.49■■□□□ 1.51
BRF1-217ENST00000550375 PRAM1Q96QH2 718 aa24.49■■□□□ 1.51
BRF1-217ENST00000550375 POGKQ9P215 609 aa24.49■■□□□ 1.51
BRF1-217ENST00000550375 NALCNQ8IZF0 1738 aa24.48■■□□□ 1.51
BRF1-217ENST00000550375 CARD11Q9BXL7 1154 aa24.48■■□□□ 1.51
BRF1-217ENST00000550375 FAM135BQ49AJ0 1406 aa24.48■■□□□ 1.51
BRF1-217ENST00000550375 SIRT1Q96EB6 747 aa24.47■■□□□ 1.51
BRF1-217ENST00000550375 NCOA3Q9Y6Q9 1424 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms