RNA–Protein interactions for RNA: ENST00000550274.1

LETMD1-222, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 809 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-222ENST00000550274 FAM50AQ14320 339 aaKnown RBP19.59■□□□□ 0.73
LETMD1-222ENST00000550274 SLC26A8Q96RN1 970 aa19.59■□□□□ 0.73
LETMD1-222ENST00000550274 E9PCH4 1651 aa19.58■□□□□ 0.72
LETMD1-222ENST00000550274 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
LETMD1-222ENST00000550274 KCNA6P17658 529 aa19.57■□□□□ 0.72
LETMD1-222ENST00000550274 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
LETMD1-222ENST00000550274 SLC52A1Q9NWF4 448 aa19.56■□□□□ 0.72
LETMD1-222ENST00000550274 ZFYVE9O95405 1425 aa19.56■□□□□ 0.72
LETMD1-222ENST00000550274 FAM135BQ49AJ0 1406 aa19.56■□□□□ 0.72
LETMD1-222ENST00000550274 PROSER2Q86WR7 435 aaPredicted RBP19.53■□□□□ 0.72
LETMD1-222ENST00000550274 IQGAP3Q86VI3 1631 aa19.52■□□□□ 0.72
LETMD1-222ENST00000550274 RGS17Q9UGC6 210 aaPredicted RBP19.52■□□□□ 0.72
LETMD1-222ENST00000550274 PHLPP1O60346 1717 aa19.51■□□□□ 0.71
LETMD1-222ENST00000550274 RIMS2Q9UQ26 1411 aa19.51■□□□□ 0.71
LETMD1-222ENST00000550274 PLEKHG1Q9ULL1 1385 aa19.5■□□□□ 0.71
LETMD1-222ENST00000550274 BCANQ96GW7 911 aa19.49■□□□□ 0.71
LETMD1-222ENST00000550274 MSH6P52701 1360 aa19.46■□□□□ 0.71
LETMD1-222ENST00000550274 ROCK1Q13464 1354 aa19.44■□□□□ 0.7
LETMD1-222ENST00000550274 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
LETMD1-222ENST00000550274 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.44■□□□□ 0.7
LETMD1-222ENST00000550274 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
LETMD1-222ENST00000550274 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
LETMD1-222ENST00000550274 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
LETMD1-222ENST00000550274 SPHKAPQ2M3C7 1700 aa19.42■□□□□ 0.7
LETMD1-222ENST00000550274 CHGAP10645 457 aaKnown RBP19.41■□□□□ 0.7
LETMD1-222ENST00000550274 NUTM2DQ5VT03 806 aaPredicted RBP19.41■□□□□ 0.7
LETMD1-222ENST00000550274 HDGFP51858 240 aaKnown RBP19.4■□□□□ 0.7
LETMD1-222ENST00000550274 SLAIN2Q9P270 581 aa19.4■□□□□ 0.7
LETMD1-222ENST00000550274 TBX22Q9Y458 520 aa19.4■□□□□ 0.7
LETMD1-222ENST00000550274 NRXN3Q9Y4C0 1643 aa19.39■□□□□ 0.69
LETMD1-222ENST00000550274 SETD1AO15047 1707 aaKnown RBP19.39■□□□□ 0.69
LETMD1-222ENST00000550274 POTEAQ6S8J7 498 aa19.38■□□□□ 0.69
LETMD1-222ENST00000550274 TRPM2O94759 1503 aa19.37■□□□□ 0.69
LETMD1-222ENST00000550274 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.37■□□□□ 0.69
LETMD1-222ENST00000550274 NCOA3Q9Y6Q9 1424 aa19.36■□□□□ 0.69
LETMD1-222ENST00000550274 NUP155O75694 1391 aa19.36■□□□□ 0.69
LETMD1-222ENST00000550274 XRN1Q8IZH2 1706 aaKnown RBP19.35■□□□□ 0.69
LETMD1-222ENST00000550274 PIK3R4Q99570 1358 aa19.34■□□□□ 0.69
LETMD1-222ENST00000550274 JCADQ9P266 1359 aa19.34■□□□□ 0.69
LETMD1-222ENST00000550274 SHPRHQ149N8 1683 aa19.34■□□□□ 0.69
LETMD1-222ENST00000550274 AHDC1Q5TGY3 1603 aaPredicted RBP19.34■□□□□ 0.69
LETMD1-222ENST00000550274 ITGAEP38570 1179 aa19.34■□□□□ 0.69
LETMD1-222ENST00000550274 PTPRUQ92729 1446 aa19.34■□□□□ 0.69
LETMD1-222ENST00000550274 C14orf37Q86TY3 774 aa19.32■□□□□ 0.68
LETMD1-222ENST00000550274 LRP6O75581 1613 aa19.32■□□□□ 0.68
LETMD1-222ENST00000550274 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
LETMD1-222ENST00000550274 CLTCL1P53675 1640 aa19.3■□□□□ 0.68
LETMD1-222ENST00000550274 PPARGC1BQ86YN6 1023 aaKnown RBP19.3■□□□□ 0.68
LETMD1-222ENST00000550274 KIF1BO60333 1816 aa19.29■□□□□ 0.68
LETMD1-222ENST00000550274 CADPS2Q86UW7 1296 aa19.28■□□□□ 0.68
LETMD1-222ENST00000550274 C19orf44Q9H6X5 657 aa19.28■□□□□ 0.68
LETMD1-222ENST00000550274 AMOTL2Q9Y2J4 779 aa19.28■□□□□ 0.68
LETMD1-222ENST00000550274 NHSL1Q5SYE7 1610 aa19.26■□□□□ 0.67
LETMD1-222ENST00000550274 ATF3P18847 181 aa19.26■□□□□ 0.67
LETMD1-222ENST00000550274 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
LETMD1-222ENST00000550274 NALCNQ8IZF0 1738 aa19.25■□□□□ 0.67
LETMD1-222ENST00000550274 DCCP43146 1447 aa19.24■□□□□ 0.67
LETMD1-222ENST00000550274 SPATA31A6Q5VVP1 1343 aa19.24■□□□□ 0.67
LETMD1-222ENST00000550274 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
LETMD1-222ENST00000550274 METP08581 1390 aa19.22■□□□□ 0.67
LETMD1-222ENST00000550274 BRINP3Q76B58 766 aa19.22■□□□□ 0.67
LETMD1-222ENST00000550274 ADRA2BP18089 450 aa19.21■□□□□ 0.67
LETMD1-222ENST00000550274 MST1RQ04912 1400 aa19.21■□□□□ 0.67
LETMD1-222ENST00000550274 ZNF326Q5BKZ1 582 aaKnown RBP19.2■□□□□ 0.66
LETMD1-222ENST00000550274 NAIPQ13075 1403 aa19.18■□□□□ 0.66
LETMD1-222ENST00000550274 RRBP1Q9P2E9 1410 aaKnown RBP19.18■□□□□ 0.66
LETMD1-222ENST00000550274 MEX3CQ5U5Q3 659 aaKnown RBP19.17■□□□□ 0.66
LETMD1-222ENST00000550274 ADGRL3Q9HAR2 1447 aa19.17■□□□□ 0.66
LETMD1-222ENST00000550274 PPLO60437 1756 aa19.16■□□□□ 0.66
LETMD1-222ENST00000550274 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
LETMD1-222ENST00000550274 ZNF772Q68DY9 489 aaPredicted RBP19.13■□□□□ 0.65
LETMD1-222ENST00000550274 NUTM2BA6NNL0 878 aaPredicted RBP19.12■□□□□ 0.65
LETMD1-222ENST00000550274 NUTM2EB1AL46 878 aaPredicted RBP19.12■□□□□ 0.65
LETMD1-222ENST00000550274 NUTM2AQ8IVF1 878 aaPredicted RBP19.12■□□□□ 0.65
LETMD1-222ENST00000550274 LAMC1P11047 1609 aa19.11■□□□□ 0.65
LETMD1-222ENST00000550274 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
LETMD1-222ENST00000550274 DDX17Q92841 729 aaKnown RBP19.1■□□□□ 0.65
LETMD1-222ENST00000550274 PTCH1Q13635 1447 aa19.08■□□□□ 0.65
LETMD1-222ENST00000550274 HFM1A2PYH4 1435 aa19.08■□□□□ 0.64
LETMD1-222ENST00000550274 C1orf167Q5SNV9 1468 aa19.07■□□□□ 0.64
LETMD1-222ENST00000550274 PNPLA6Q8IY17 1366 aa19.06■□□□□ 0.64
LETMD1-222ENST00000550274 ROBO2Q9HCK4 1378 aa19.06■□□□□ 0.64
LETMD1-222ENST00000550274 AFF2P51816 1311 aa19.06■□□□□ 0.64
LETMD1-222ENST00000550274 LRRC59Q96AG4 307 aaKnown RBP19.06■□□□□ 0.64
LETMD1-222ENST00000550274 CDK12Q9NYV4 1490 aaPredicted RBP19.05■□□□□ 0.64
LETMD1-222ENST00000550274 UPF1Q92900 1129 aaKnown RBP eCLIP19.05■□□□□ 0.646e-9■□□□□ 9.5
LETMD1-222ENST00000550274 PRAG1Q86YV5 1406 aa19.05■□□□□ 0.64
LETMD1-222ENST00000550274 RXRBP28702 533 aa19.04■□□□□ 0.64
LETMD1-222ENST00000550274 IFT172Q9UG01 1749 aa19.04■□□□□ 0.64
LETMD1-222ENST00000550274 VGFO15240 615 aaPredicted RBP19.02■□□□□ 0.64
LETMD1-222ENST00000550274 C8orf37Q96NL8 207 aa19.01■□□□□ 0.63
LETMD1-222ENST00000550274 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
LETMD1-222ENST00000550274 COL22A1Q8NFW1 1626 aaPredicted RBP19■□□□□ 0.63
LETMD1-222ENST00000550274 RGS12O14924 1447 aa19■□□□□ 0.63
LETMD1-222ENST00000550274 RPGRIP1LQ68CZ1 1315 aa19■□□□□ 0.63
LETMD1-222ENST00000550274 CDC42BPGQ6DT37 1551 aa18.99■□□□□ 0.63
LETMD1-222ENST00000550274 ORAI2Q96SN7 254 aa18.99■□□□□ 0.63
LETMD1-222ENST00000550274 MARF1Q9Y4F3 1742 aaKnown RBP18.99■□□□□ 0.63
LETMD1-222ENST00000550274 SOS2Q07890 1332 aaPredicted RBP18.98■□□□□ 0.63
LETMD1-222ENST00000550274 KNDC1Q76NI1 1749 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms