RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
NUP188-211ENST00000550219 TMEM131LA2VDJ0 1609 aa20.47■□□□□ 0.87
NUP188-211ENST00000550219 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
NUP188-211ENST00000550219 SOCS7O14512 581 aa20.46■□□□□ 0.87
NUP188-211ENST00000550219 PPP1R15AO75807 674 aaPredicted RBP20.46■□□□□ 0.87
NUP188-211ENST00000550219 ZFYVE9O95405 1425 aa20.45■□□□□ 0.86
NUP188-211ENST00000550219 RIMS2Q9UQ26 1411 aa20.45■□□□□ 0.86
NUP188-211ENST00000550219 NWD1Q149M9 1564 aa20.45■□□□□ 0.86
NUP188-211ENST00000550219 TMEM94Q12767 1356 aa20.45■□□□□ 0.86
NUP188-211ENST00000550219 NUP155O75694 1391 aa20.44■□□□□ 0.86
NUP188-211ENST00000550219 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
NUP188-211ENST00000550219 NKTRP30414 1462 aaKnown RBP20.43■□□□□ 0.86
NUP188-211ENST00000550219 KCNA6P17658 529 aa20.42■□□□□ 0.86
NUP188-211ENST00000550219 PROSER2Q86WR7 435 aaPredicted RBP20.41■□□□□ 0.86
NUP188-211ENST00000550219 PLEKHG1Q9ULL1 1385 aa20.41■□□□□ 0.86
NUP188-211ENST00000550219 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
NUP188-211ENST00000550219 NUTM2DQ5VT03 806 aaPredicted RBP20.38■□□□□ 0.85
NUP188-211ENST00000550219 HDGFP51858 240 aaKnown RBP20.36■□□□□ 0.85
NUP188-211ENST00000550219 SPHKAPQ2M3C7 1700 aa20.36■□□□□ 0.85
NUP188-211ENST00000550219 ROBO1Q9Y6N7 1651 aa20.35■□□□□ 0.85
NUP188-211ENST00000550219 MSH6P52701 1360 aa20.34■□□□□ 0.85
NUP188-211ENST00000550219 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
NUP188-211ENST00000550219 RRBP1Q9P2E9 1410 aaKnown RBP20.34■□□□□ 0.85
NUP188-211ENST00000550219 CHD2O14647 1828 aaKnown RBP20.33■□□□□ 0.85
NUP188-211ENST00000550219 DIP2AQ14689 1571 aa20.33■□□□□ 0.84
NUP188-211ENST00000550219 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
NUP188-211ENST00000550219 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
NUP188-211ENST00000550219 TRPM2O94759 1503 aa20.28■□□□□ 0.84
NUP188-211ENST00000550219 C14orf37Q86TY3 774 aa20.28■□□□□ 0.84
NUP188-211ENST00000550219 TBX22Q9Y458 520 aa20.28■□□□□ 0.84
NUP188-211ENST00000550219 NAIPQ13075 1403 aa20.27■□□□□ 0.84
NUP188-211ENST00000550219 CLTCL1P53675 1640 aa20.27■□□□□ 0.83
NUP188-211ENST00000550219 ZNF326Q5BKZ1 582 aaKnown RBP20.26■□□□□ 0.83
NUP188-211ENST00000550219 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
NUP188-211ENST00000550219 PHLPP1O60346 1717 aa20.23■□□□□ 0.83
NUP188-211ENST00000550219 PIK3R4Q99570 1358 aa20.22■□□□□ 0.83
NUP188-211ENST00000550219 SETBP1Q9Y6X0 1596 aa20.21■□□□□ 0.83
NUP188-211ENST00000550219 PTPRUQ92729 1446 aa20.21■□□□□ 0.83
NUP188-211ENST00000550219 SLAIN2Q9P270 581 aa20.21■□□□□ 0.83
NUP188-211ENST00000550219 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
NUP188-211ENST00000550219 TRIM52Q96A61 297 aa20.2■□□□□ 0.82
NUP188-211ENST00000550219 NEXMIFQ5QGS0 1516 aa20.19■□□□□ 0.82
NUP188-211ENST00000550219 XRN1Q8IZH2 1706 aaKnown RBP20.19■□□□□ 0.82
NUP188-211ENST00000550219 HFM1A2PYH4 1435 aa20.19■□□□□ 0.82
NUP188-211ENST00000550219 NCOA3Q9Y6Q9 1424 aa20.19■□□□□ 0.82
NUP188-211ENST00000550219 AMOTL2Q9Y2J4 779 aa20.18■□□□□ 0.82
NUP188-211ENST00000550219 KIF1BO60333 1816 aa20.17■□□□□ 0.82
NUP188-211ENST00000550219 COL16A1Q07092 1604 aaPredicted RBP20.16■□□□□ 0.82
NUP188-211ENST00000550219 ATF3P18847 181 aa20.15■□□□□ 0.82
NUP188-211ENST00000550219 CADPS2Q86UW7 1296 aa20.14■□□□□ 0.81
NUP188-211ENST00000550219 METP08581 1390 aa20.13■□□□□ 0.81
NUP188-211ENST00000550219 RGS17Q9UGC6 210 aaPredicted RBP20.13■□□□□ 0.81
NUP188-211ENST00000550219 JCADQ9P266 1359 aa20.12■□□□□ 0.81
NUP188-211ENST00000550219 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
NUP188-211ENST00000550219 C19orf44Q9H6X5 657 aa20.12■□□□□ 0.81
NUP188-211ENST00000550219 AHDC1Q5TGY3 1603 aaPredicted RBP20.11■□□□□ 0.81
NUP188-211ENST00000550219 DCCP43146 1447 aa20.09■□□□□ 0.81
NUP188-211ENST00000550219 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
NUP188-211ENST00000550219 ASXL1Q8IXJ9 1541 aa20.07■□□□□ 0.8
NUP188-211ENST00000550219 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
NUP188-211ENST00000550219 ADGRL3Q9HAR2 1447 aa20.05■□□□□ 0.8
NUP188-211ENST00000550219 FOXD1Q16676 465 aa20.05■□□□□ 0.8
NUP188-211ENST00000550219 POTEAQ6S8J7 498 aa20.05■□□□□ 0.8
NUP188-211ENST00000550219 BRINP3Q76B58 766 aa20.05■□□□□ 0.8
NUP188-211ENST00000550219 LRP6O75581 1613 aa20.05■□□□□ 0.8
NUP188-211ENST00000550219 SHPRHQ149N8 1683 aa20.04■□□□□ 0.8
NUP188-211ENST00000550219 MST1RQ04912 1400 aa20.04■□□□□ 0.8
NUP188-211ENST00000550219 PPLO60437 1756 aa20.03■□□□□ 0.8
NUP188-211ENST00000550219 MEX3CQ5U5Q3 659 aaKnown RBP20.02■□□□□ 0.8
NUP188-211ENST00000550219 VGFO15240 615 aaPredicted RBP20.01■□□□□ 0.79
NUP188-211ENST00000550219 NHSL1Q5SYE7 1610 aa20.01■□□□□ 0.79
NUP188-211ENST00000550219 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
NUP188-211ENST00000550219 PTCH1Q13635 1447 aa20■□□□□ 0.79
NUP188-211ENST00000550219 SPATA31A6Q5VVP1 1343 aa20■□□□□ 0.79
NUP188-211ENST00000550219 RPGRIP1LQ68CZ1 1315 aa19.98■□□□□ 0.79
NUP188-211ENST00000550219 ROBO2Q9HCK4 1378 aa19.97■□□□□ 0.79
NUP188-211ENST00000550219 NUTM2BA6NNL0 878 aaPredicted RBP19.96■□□□□ 0.79
NUP188-211ENST00000550219 NUTM2EB1AL46 878 aaPredicted RBP19.96■□□□□ 0.79
NUP188-211ENST00000550219 NUTM2AQ8IVF1 878 aaPredicted RBP19.96■□□□□ 0.79
NUP188-211ENST00000550219 DDX17Q92841 729 aaKnown RBP19.95■□□□□ 0.78
NUP188-211ENST00000550219 RGL3Q3MIN7 710 aa19.94■□□□□ 0.78
NUP188-211ENST00000550219 C1orf167Q5SNV9 1468 aa19.93■□□□□ 0.78
NUP188-211ENST00000550219 MPHOSPH9Q99550 1183 aa19.93■□□□□ 0.78
NUP188-211ENST00000550219 IFT172Q9UG01 1749 aa19.93■□□□□ 0.78
NUP188-211ENST00000550219 SETD5Q9C0A6 1442 aa19.93■□□□□ 0.78
NUP188-211ENST00000550219 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
NUP188-211ENST00000550219 TRIM26Q12899 539 aaPredicted RBP19.91■□□□□ 0.78
NUP188-211ENST00000550219 ADGRF5Q8IZF2 1346 aa19.91■□□□□ 0.78
NUP188-211ENST00000550219 SPATA31E1Q6ZUB1 1445 aa19.91■□□□□ 0.78
NUP188-211ENST00000550219 PNPLA6Q8IY17 1366 aa19.88■□□□□ 0.77
NUP188-211ENST00000550219 ZNF772Q68DY9 489 aaPredicted RBP19.88■□□□□ 0.77
NUP188-211ENST00000550219 ANKRD30BQ9BXX2 1392 aa19.87■□□□□ 0.77
NUP188-211ENST00000550219 LRRC59Q96AG4 307 aaKnown RBP19.87■□□□□ 0.77
NUP188-211ENST00000550219 CDC42BPGQ6DT37 1551 aa19.87■□□□□ 0.77
NUP188-211ENST00000550219 ORAI2Q96SN7 254 aa19.86■□□□□ 0.77
NUP188-211ENST00000550219 STK26Q9P289 416 aa19.86■□□□□ 0.77
NUP188-211ENST00000550219 LAMC1P11047 1609 aa19.84■□□□□ 0.77
NUP188-211ENST00000550219 AFF2P51816 1311 aa19.84■□□□□ 0.77
NUP188-211ENST00000550219 KNDC1Q76NI1 1749 aa19.84■□□□□ 0.77
NUP188-211ENST00000550219 PIK3C2GO75747 1445 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms