RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SYNMO15061 1565 aa11.99□□□□□ -0.49
TMEM116-209ENST00000550020 MAP3K4Q9Y6R4 1608 aa11.99□□□□□ -0.49
TMEM116-209ENST00000550020 KIF1BO60333 1816 aa11.98□□□□□ -0.49
TMEM116-209ENST00000550020 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
TMEM116-209ENST00000550020 TSHZ2Q9NRE2 1034 aa11.98□□□□□ -0.49
TMEM116-209ENST00000550020 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
TMEM116-209ENST00000550020 NRXN1Q9ULB1 1477 aa11.97□□□□□ -0.49
TMEM116-209ENST00000550020 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
TMEM116-209ENST00000550020 CNGB1Q14028 1251 aaPredicted RBP11.97□□□□□ -0.49
TMEM116-209ENST00000550020 GLI2P10070 1586 aa11.96□□□□□ -0.49
TMEM116-209ENST00000550020 ADGRB3O60242 1522 aa11.96□□□□□ -0.49
TMEM116-209ENST00000550020 SETBP1Q9Y6X0 1596 aa11.96□□□□□ -0.5
TMEM116-209ENST00000550020 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
TMEM116-209ENST00000550020 ZC3H13Q5T200 1668 aaKnown RBP11.94□□□□□ -0.5
TMEM116-209ENST00000550020 FRMPD1Q5SYB0 1578 aa11.94□□□□□ -0.5
TMEM116-209ENST00000550020 CC2D1BQ5T0F9 858 aaKnown RBP11.94□□□□□ -0.5
TMEM116-209ENST00000550020 GGT6Q6P531 493 aa11.94□□□□□ -0.5
TMEM116-209ENST00000550020 ABCC3O15438 1527 aa11.94□□□□□ -0.5
TMEM116-209ENST00000550020 NPATQ14207 1427 aa11.94□□□□□ -0.5
TMEM116-209ENST00000550020 RNF123Q5XPI4 1314 aa11.93□□□□□ -0.5
TMEM116-209ENST00000550020 ASXL1Q8IXJ9 1541 aa11.93□□□□□ -0.5
TMEM116-209ENST00000550020 KDM5AP29375 1690 aaKnown RBP11.93□□□□□ -0.5
TMEM116-209ENST00000550020 ABCA6Q8N139 1617 aa11.93□□□□□ -0.5
TMEM116-209ENST00000550020 IFT172Q9UG01 1749 aa11.92□□□□□ -0.5
TMEM116-209ENST00000550020 VGFO15240 615 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-209ENST00000550020 CHGAP10645 457 aaKnown RBP11.92□□□□□ -0.5
TMEM116-209ENST00000550020 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
TMEM116-209ENST00000550020 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
TMEM116-209ENST00000550020 NOS1P29475 1434 aa11.92□□□□□ -0.5
TMEM116-209ENST00000550020 WDR43Q15061 677 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM116-209ENST00000550020 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
TMEM116-209ENST00000550020 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
TMEM116-209ENST00000550020 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
TMEM116-209ENST00000550020 PIK3C2GO75747 1445 aa11.91□□□□□ -0.5
TMEM116-209ENST00000550020 BLMP54132 1417 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-209ENST00000550020 DIP2CQ9Y2E4 1556 aa11.91□□□□□ -0.5
TMEM116-209ENST00000550020 ADGRF5Q8IZF2 1346 aa11.9□□□□□ -0.5
TMEM116-209ENST00000550020 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-209ENST00000550020 CAMSAP1Q5T5Y3 1602 aa11.9□□□□□ -0.5
TMEM116-209ENST00000550020 MYO3AQ8NEV4 1616 aa11.9□□□□□ -0.5
TMEM116-209ENST00000550020 NGEFQ8N5V2 710 aa11.9□□□□□ -0.5
TMEM116-209ENST00000550020 UGGT1Q9NYU2 1555 aa11.89□□□□□ -0.51
TMEM116-209ENST00000550020 ZFYVE9O95405 1425 aa11.88□□□□□ -0.51
TMEM116-209ENST00000550020 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
TMEM116-209ENST00000550020 IRX6P78412 446 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-209ENST00000550020 AMER1Q5JTC6 1135 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-209ENST00000550020 RAPGEF3O95398 923 aa11.87□□□□□ -0.51
TMEM116-209ENST00000550020 ERVK-7P63135 1459 aa11.87□□□□□ -0.51
TMEM116-209ENST00000550020 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
TMEM116-209ENST00000550020 RICTORQ6R327 1708 aa11.86□□□□□ -0.51
TMEM116-209ENST00000550020 RCAN3Q9UKA8 241 aa11.86□□□□□ -0.51
TMEM116-209ENST00000550020 PPLO60437 1756 aa11.86□□□□□ -0.51
TMEM116-209ENST00000550020 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
TMEM116-209ENST00000550020 REREQ9P2R6 1566 aa11.84□□□□□ -0.51
TMEM116-209ENST00000550020 CCDC136Q96JN2 1154 aa11.84□□□□□ -0.51
TMEM116-209ENST00000550020 EVC2Q86UK5 1308 aa11.84□□□□□ -0.51
TMEM116-209ENST00000550020 NINLQ9Y2I6 1382 aa11.83□□□□□ -0.52
TMEM116-209ENST00000550020 CYB5RLQ6IPT4 315 aa11.83□□□□□ -0.52
TMEM116-209ENST00000550020 ADGRB1O14514 1584 aa11.83□□□□□ -0.52
TMEM116-209ENST00000550020 AGLP35573 1532 aa11.82□□□□□ -0.52
TMEM116-209ENST00000550020 MYOM1P52179 1685 aa11.82□□□□□ -0.52
TMEM116-209ENST00000550020 RRP1P56182 461 aaKnown RBP11.82□□□□□ -0.52
TMEM116-209ENST00000550020 FAM69CQ0P6D2 419 aa11.82□□□□□ -0.52
TMEM116-209ENST00000550020 RBM19Q9Y4C8 960 aaKnown RBP11.82□□□□□ -0.52
TMEM116-209ENST00000550020 NSD2O96028 1365 aa11.81□□□□□ -0.52
TMEM116-209ENST00000550020 NEXMIFQ5QGS0 1516 aa11.81□□□□□ -0.52
TMEM116-209ENST00000550020 YEATS2Q9ULM3 1422 aa11.8□□□□□ -0.52
TMEM116-209ENST00000550020 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.8□□□□□ -0.52
TMEM116-209ENST00000550020 ADAMTS8Q9UP79 889 aa11.8□□□□□ -0.52
TMEM116-209ENST00000550020 TRAK1Q9UPV9 953 aa11.8□□□□□ -0.52
TMEM116-209ENST00000550020 CGNL1Q0VF96 1302 aa11.8□□□□□ -0.52
TMEM116-209ENST00000550020 DIP2BQ9P265 1576 aa11.79□□□□□ -0.52
TMEM116-209ENST00000550020 RIMBP3CA6NJZ7 1639 aa11.79□□□□□ -0.52
TMEM116-209ENST00000550020 RIMBP3BA6NNM3 1639 aa11.79□□□□□ -0.52
TMEM116-209ENST00000550020 RIMBP3Q9UFD9 1639 aa11.79□□□□□ -0.52
TMEM116-209ENST00000550020 B4GALNT3Q6L9W6 998 aa11.79□□□□□ -0.52
TMEM116-209ENST00000550020 CFAP53Q96M91 514 aa11.79□□□□□ -0.52
TMEM116-209ENST00000550020 POLR3AO14802 1390 aaPredicted RBP11.79□□□□□ -0.52
TMEM116-209ENST00000550020 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
TMEM116-209ENST00000550020 GOLGA2Q08379 1002 aa11.78□□□□□ -0.52
TMEM116-209ENST00000550020 IDI1Q13907 227 aa11.78□□□□□ -0.52
TMEM116-209ENST00000550020 FANCIQ9NVI1 1328 aa11.78□□□□□ -0.52
TMEM116-209ENST00000550020 USP32Q8NFA0 1604 aa11.78□□□□□ -0.52
TMEM116-209ENST00000550020 MORC1Q86VD1 984 aa11.77□□□□□ -0.53
TMEM116-209ENST00000550020 PREX1Q8TCU6 1659 aa11.76□□□□□ -0.53
TMEM116-209ENST00000550020 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
TMEM116-209ENST00000550020 SALL2Q9Y467 1007 aaPredicted RBP11.76□□□□□ -0.53
TMEM116-209ENST00000550020 ATAD2Q6PL18 1390 aa11.76□□□□□ -0.53
TMEM116-209ENST00000550020 ANKRD36BQ8N2N9 1353 aa11.76□□□□□ -0.53
TMEM116-209ENST00000550020 NSD3Q9BZ95 1437 aa11.76□□□□□ -0.53
TMEM116-209ENST00000550020 SIGLEC1Q9BZZ2 1709 aa11.75□□□□□ -0.53
TMEM116-209ENST00000550020 HDGFP51858 240 aaKnown RBP11.75□□□□□ -0.53
TMEM116-209ENST00000550020 NCBP3Q53F19 620 aaKnown RBP11.75□□□□□ -0.53
TMEM116-209ENST00000550020 CARD14Q9BXL6 1004 aa11.75□□□□□ -0.53
TMEM116-209ENST00000550020 TMEM131LA2VDJ0 1609 aa11.74□□□□□ -0.53
TMEM116-209ENST00000550020 TMEM132EQ6IEE7 984 aa11.73□□□□□ -0.53
TMEM116-209ENST00000550020 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.73□□□□□ -0.53
TMEM116-209ENST00000550020 ESF1Q9H501 851 aaKnown RBP11.73□□□□□ -0.53
TMEM116-209ENST00000550020 TERF2IPQ9NYB0 399 aa11.73□□□□□ -0.53
TMEM116-209ENST00000550020 ZNF521Q96K83 1311 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms