RNA–Protein interactions for RNA: ENST00000549760.1

RAB3IP-211, Transcript of RAB3A interacting protein, humanhuman

TSL 3

Gene RAB3IP, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-211ENST00000549760 NKTRP30414 1462 aaKnown RBP32.35■■■□□ 2.77
RAB3IP-211ENST00000549760 TMEM94Q12767 1356 aa32.34■■■□□ 2.77
RAB3IP-211ENST00000549760 ZFYVE9O95405 1425 aa32.34■■■□□ 2.77
RAB3IP-211ENST00000549760 ROCK1Q13464 1354 aa32.33■■■□□ 2.77
RAB3IP-211ENST00000549760 KCNA6P17658 529 aa32.33■■■□□ 2.77
RAB3IP-211ENST00000549760 PHF23Q9BUL5 403 aaPredicted RBP32.31■■■□□ 2.76
RAB3IP-211ENST00000549760 CHD2O14647 1828 aaKnown RBP32.3■■■□□ 2.76
RAB3IP-211ENST00000549760 RIMS2Q9UQ26 1411 aa32.29■■■□□ 2.76
RAB3IP-211ENST00000549760 BCANQ96GW7 911 aa32.29■■■□□ 2.76
RAB3IP-211ENST00000549760 ROBO1Q9Y6N7 1651 aa32.29■■■□□ 2.76
RAB3IP-211ENST00000549760 PLEKHG1Q9ULL1 1385 aa32.27■■■□□ 2.76
RAB3IP-211ENST00000549760 PROSER2Q86WR7 435 aaPredicted RBP32.25■■■□□ 2.75
RAB3IP-211ENST00000549760 FAM135BQ49AJ0 1406 aa32.25■■■□□ 2.75
RAB3IP-211ENST00000549760 PPP1R15AO75807 674 aaPredicted RBP32.24■■■□□ 2.75
RAB3IP-211ENST00000549760 RBM33Q96EV2 1170 aaKnown RBP32.21■■■□□ 2.75
RAB3IP-211ENST00000549760 HDGFP51858 240 aaKnown RBP32.19■■■□□ 2.74
RAB3IP-211ENST00000549760 DIP2AQ14689 1571 aa32.19■■■□□ 2.74
RAB3IP-211ENST00000549760 CHGAP10645 457 aaKnown RBP32.18■■■□□ 2.74
RAB3IP-211ENST00000549760 ITGAEP38570 1179 aa32.18■■■□□ 2.74
RAB3IP-211ENST00000549760 MSH6P52701 1360 aa32.18■■■□□ 2.74
RAB3IP-211ENST00000549760 SPHKAPQ2M3C7 1700 aa32.17■■■□□ 2.74
RAB3IP-211ENST00000549760 NUP155O75694 1391 aa32.17■■■□□ 2.74
RAB3IP-211ENST00000549760 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.14■■■□□ 2.74
RAB3IP-211ENST00000549760 PHLPP1O60346 1717 aa32.12■■■□□ 2.73
RAB3IP-211ENST00000549760 PPARGC1BQ86YN6 1023 aaKnown RBP32.11■■■□□ 2.73
RAB3IP-211ENST00000549760 ADAMTS13Q76LX8 1427 aa32.1■■■□□ 2.73
RAB3IP-211ENST00000549760 TBX22Q9Y458 520 aa32.08■■■□□ 2.73
RAB3IP-211ENST00000549760 TRPM2O94759 1503 aa32.07■■■□□ 2.72
RAB3IP-211ENST00000549760 NUTM2DQ5VT03 806 aaPredicted RBP32.07■■■□□ 2.72
RAB3IP-211ENST00000549760 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.03■■■□□ 2.72
RAB3IP-211ENST00000549760 PIK3R4Q99570 1358 aa32.03■■■□□ 2.72
RAB3IP-211ENST00000549760 NCOA3Q9Y6Q9 1424 aa32.02■■■□□ 2.72
RAB3IP-211ENST00000549760 NRXN3Q9Y4C0 1643 aa32.01■■■□□ 2.72
RAB3IP-211ENST00000549760 SLAIN2Q9P270 581 aa32■■■□□ 2.71
RAB3IP-211ENST00000549760 COL16A1Q07092 1604 aaPredicted RBP31.98■■■□□ 2.71
RAB3IP-211ENST00000549760 RGS17Q9UGC6 210 aaPredicted RBP31.98■■■□□ 2.71
RAB3IP-211ENST00000549760 SETBP1Q9Y6X0 1596 aa31.98■■■□□ 2.71
RAB3IP-211ENST00000549760 C14orf37Q86TY3 774 aa31.97■■■□□ 2.71
RAB3IP-211ENST00000549760 RRBP1Q9P2E9 1410 aaKnown RBP31.97■■■□□ 2.71
RAB3IP-211ENST00000549760 XRN1Q8IZH2 1706 aaKnown RBP31.97■■■□□ 2.71
RAB3IP-211ENST00000549760 CLTCL1P53675 1640 aa31.97■■■□□ 2.71
RAB3IP-211ENST00000549760 KIF1BO60333 1816 aa31.94■■■□□ 2.7
RAB3IP-211ENST00000549760 PTPRUQ92729 1446 aa31.92■■■□□ 2.7
RAB3IP-211ENST00000549760 JCADQ9P266 1359 aa31.9■■■□□ 2.7
RAB3IP-211ENST00000549760 AHDC1Q5TGY3 1603 aaPredicted RBP31.89■■■□□ 2.7
RAB3IP-211ENST00000549760 NAIPQ13075 1403 aa31.89■■■□□ 2.7
RAB3IP-211ENST00000549760 NEXMIFQ5QGS0 1516 aa31.88■■■□□ 2.69
RAB3IP-211ENST00000549760 ZNF326Q5BKZ1 582 aaKnown RBP31.87■■■□□ 2.69
RAB3IP-211ENST00000549760 CADPS2Q86UW7 1296 aa31.87■■■□□ 2.69
RAB3IP-211ENST00000549760 AMOTL2Q9Y2J4 779 aa31.87■■■□□ 2.69
RAB3IP-211ENST00000549760 C19orf44Q9H6X5 657 aa31.86■■■□□ 2.69
RAB3IP-211ENST00000549760 ATF3P18847 181 aa31.85■■■□□ 2.69
RAB3IP-211ENST00000549760 SHPRHQ149N8 1683 aa31.85■■■□□ 2.69
RAB3IP-211ENST00000549760 DCCP43146 1447 aa31.83■■■□□ 2.69
RAB3IP-211ENST00000549760 POTEAQ6S8J7 498 aa31.81■■■□□ 2.68
RAB3IP-211ENST00000549760 NALCNQ8IZF0 1738 aa31.78■■■□□ 2.68
RAB3IP-211ENST00000549760 LRP6O75581 1613 aa31.77■■■□□ 2.68
RAB3IP-211ENST00000549760 METP08581 1390 aa31.77■■■□□ 2.68
RAB3IP-211ENST00000549760 HFM1A2PYH4 1435 aa31.76■■■□□ 2.68
RAB3IP-211ENST00000549760 SETD1AO15047 1707 aaKnown RBP31.76■■■□□ 2.67
RAB3IP-211ENST00000549760 ASXL1Q8IXJ9 1541 aa31.75■■■□□ 2.67
RAB3IP-211ENST00000549760 NHSL1Q5SYE7 1610 aa31.75■■■□□ 2.67
RAB3IP-211ENST00000549760 SPATA31A6Q5VVP1 1343 aa31.73■■■□□ 2.67
RAB3IP-211ENST00000549760 BRINP3Q76B58 766 aa31.71■■■□□ 2.67
RAB3IP-211ENST00000549760 MST1RQ04912 1400 aa31.71■■■□□ 2.67
RAB3IP-211ENST00000549760 ADGRL3Q9HAR2 1447 aa31.7■■■□□ 2.67
RAB3IP-211ENST00000549760 PPLO60437 1756 aa31.7■■■□□ 2.67
RAB3IP-211ENST00000549760 TRIM52Q96A61 297 aa31.69■■■□□ 2.66
RAB3IP-211ENST00000549760 MEX3CQ5U5Q3 659 aaKnown RBP31.65■■■□□ 2.66
RAB3IP-211ENST00000549760 PTCH1Q13635 1447 aa31.62■■■□□ 2.65
RAB3IP-211ENST00000549760 SLC4A1APQ9BWU0 796 aaKnown RBP31.61■■■□□ 2.65
RAB3IP-211ENST00000549760 SETD5Q9C0A6 1442 aa31.59■■■□□ 2.65
RAB3IP-211ENST00000549760 VGFO15240 615 aaPredicted RBP31.58■■■□□ 2.65
RAB3IP-211ENST00000549760 PRAG1Q86YV5 1406 aa31.55■■■□□ 2.64
RAB3IP-211ENST00000549760 RPGRIP1LQ68CZ1 1315 aa31.54■■■□□ 2.64
RAB3IP-211ENST00000549760 ZNF772Q68DY9 489 aaPredicted RBP31.54■■■□□ 2.64
RAB3IP-211ENST00000549760 LAMC1P11047 1609 aa31.53■■■□□ 2.64
RAB3IP-211ENST00000549760 NUTM2BA6NNL0 878 aaPredicted RBP31.52■■■□□ 2.64
RAB3IP-211ENST00000549760 NUTM2EB1AL46 878 aaPredicted RBP31.52■■■□□ 2.64
RAB3IP-211ENST00000549760 NUTM2AQ8IVF1 878 aaPredicted RBP31.52■■■□□ 2.64
RAB3IP-211ENST00000549760 ROBO2Q9HCK4 1378 aa31.52■■■□□ 2.64
RAB3IP-211ENST00000549760 IFT172Q9UG01 1749 aa31.52■■■□□ 2.64
RAB3IP-211ENST00000549760 C1orf167Q5SNV9 1468 aa31.51■■■□□ 2.63
RAB3IP-211ENST00000549760 DDX17Q92841 729 aaKnown RBP31.47■■■□□ 2.63
RAB3IP-211ENST00000549760 LRRC59Q96AG4 307 aaKnown RBP31.47■■■□□ 2.63
RAB3IP-211ENST00000549760 CCDC144AA2RUR9 1427 aa31.47■■■□□ 2.63
RAB3IP-211ENST00000549760 PNPLA6Q8IY17 1366 aa31.46■■■□□ 2.63
RAB3IP-211ENST00000549760 FOXD1Q16676 465 aa31.46■■■□□ 2.63
RAB3IP-211ENST00000549760 CDC42BPGQ6DT37 1551 aa31.43■■■□□ 2.62
RAB3IP-211ENST00000549760 AFF2P51816 1311 aa31.41■■■□□ 2.62
RAB3IP-211ENST00000549760 KNDC1Q76NI1 1749 aa31.4■■■□□ 2.62
RAB3IP-211ENST00000549760 SPATA31E1Q6ZUB1 1445 aa31.39■■■□□ 2.62
RAB3IP-211ENST00000549760 CDK12Q9NYV4 1490 aaPredicted RBP31.38■■■□□ 2.61
RAB3IP-211ENST00000549760 RXRBP28702 533 aa31.36■■■□□ 2.61
RAB3IP-211ENST00000549760 ADGRF5Q8IZF2 1346 aa31.35■■■□□ 2.61
RAB3IP-211ENST00000549760 ORAI2Q96SN7 254 aa31.35■■■□□ 2.61
RAB3IP-211ENST00000549760 C8orf37Q96NL8 207 aa31.34■■■□□ 2.61
RAB3IP-211ENST00000549760 ANKRD30BQ9BXX2 1392 aa31.33■■■□□ 2.61
RAB3IP-211ENST00000549760 MPHOSPH9Q99550 1183 aa31.33■■■□□ 2.61
RAB3IP-211ENST00000549760 COL22A1Q8NFW1 1626 aaPredicted RBP31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms