RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
PKP2-206ENST00000549461 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
PKP2-206ENST00000549461 UHRF1BP1Q6BDS2 1440 aa13.42□□□□□ -0.26
PKP2-206ENST00000549461 PRAG1Q86YV5 1406 aa13.42□□□□□ -0.26
PKP2-206ENST00000549461 KDM5AP29375 1690 aaKnown RBP13.41□□□□□ -0.26
PKP2-206ENST00000549461 ZNF142P52746 1687 aaPredicted RBP13.41□□□□□ -0.26
PKP2-206ENST00000549461 ZFYVE9O95405 1425 aa13.41□□□□□ -0.26
PKP2-206ENST00000549461 RIMS2Q9UQ26 1411 aa13.41□□□□□ -0.26
PKP2-206ENST00000549461 MYOM2P54296 1465 aa13.41□□□□□ -0.26
PKP2-206ENST00000549461 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
PKP2-206ENST00000549461 RPGRIP1LQ68CZ1 1315 aa13.39□□□□□ -0.27
PKP2-206ENST00000549461 TMEM2Q9UHN6 1383 aa13.39□□□□□ -0.27
PKP2-206ENST00000549461 LTKP29376 864 aa13.38□□□□□ -0.27
PKP2-206ENST00000549461 TRPM1Q7Z4N2 1603 aa13.38□□□□□ -0.27
PKP2-206ENST00000549461 ARHGAP23Q9P227 1491 aa13.37□□□□□ -0.27
PKP2-206ENST00000549461 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
PKP2-206ENST00000549461 SLIT1O75093 1534 aa13.37□□□□□ -0.27
PKP2-206ENST00000549461 PIK3C2GO75747 1445 aa13.37□□□□□ -0.27
PKP2-206ENST00000549461 RALGAPBQ86X10 1494 aa13.36□□□□□ -0.27
PKP2-206ENST00000549461 SETD1BQ9UPS6 1966 aaKnown RBP13.35□□□□□ -0.27
PKP2-206ENST00000549461 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
PKP2-206ENST00000549461 CFAP70Q5T0N1 1121 aa13.35□□□□□ -0.27
PKP2-206ENST00000549461 THEMISQ8N1K5 641 aaPredicted RBP13.34□□□□□ -0.27
PKP2-206ENST00000549461 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
PKP2-206ENST00000549461 TXNDC2Q86VQ3 553 aa13.33□□□□□ -0.28
PKP2-206ENST00000549461 LMTK3Q96Q04 1460 aa13.33□□□□□ -0.28
PKP2-206ENST00000549461 IQGAP1P46940 1657 aa13.33□□□□□ -0.28
PKP2-206ENST00000549461 HSPA2P54652 639 aa13.32□□□□□ -0.28
PKP2-206ENST00000549461 STAC3Q96MF2 364 aa13.32□□□□□ -0.28
PKP2-206ENST00000549461 ASXL1Q8IXJ9 1541 aa13.32□□□□□ -0.28
PKP2-206ENST00000549461 ROCK2O75116 1388 aaKnown RBP13.32□□□□□ -0.28
PKP2-206ENST00000549461 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
PKP2-206ENST00000549461 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.31□□□□□ -0.28
PKP2-206ENST00000549461 HIRIP3Q9BW71 556 aaPredicted RBP13.31□□□□□ -0.28
PKP2-206ENST00000549461 ALKQ9UM73 1620 aa13.31□□□□□ -0.28
PKP2-206ENST00000549461 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
PKP2-206ENST00000549461 KIAA1210Q9ULL0 1709 aa13.3□□□□□ -0.28
PKP2-206ENST00000549461 ADGRB1O14514 1584 aa13.3□□□□□ -0.28
PKP2-206ENST00000549461 TMEM132EQ6IEE7 984 aa13.3□□□□□ -0.28
PKP2-206ENST00000549461 C14orf93Q9H972 538 aaKnown RBP13.3□□□□□ -0.28
PKP2-206ENST00000549461 NCKAP5LQ9HCH0 1330 aa13.3□□□□□ -0.28
PKP2-206ENST00000549461 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
PKP2-206ENST00000549461 SETBP1Q9Y6X0 1596 aa13.29□□□□□ -0.28
PKP2-206ENST00000549461 CARD11Q9BXL7 1154 aa13.29□□□□□ -0.28
PKP2-206ENST00000549461 EID1Q9Y6B2 187 aa13.29□□□□□ -0.28
PKP2-206ENST00000549461 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
PKP2-206ENST00000549461 ADAMTS13Q76LX8 1427 aa13.29□□□□□ -0.28
PKP2-206ENST00000549461 HSPA5P11021 654 aaKnown RBP13.27□□□□□ -0.29
PKP2-206ENST00000549461 ANKLE2Q86XL3 938 aa13.27□□□□□ -0.29
PKP2-206ENST00000549461 BCANQ96GW7 911 aa13.27□□□□□ -0.29
PKP2-206ENST00000549461 LAMC1P11047 1609 aa13.27□□□□□ -0.29
PKP2-206ENST00000549461 MED14O60244 1454 aa13.26□□□□□ -0.29
PKP2-206ENST00000549461 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
PKP2-206ENST00000549461 METP08581 1390 aa13.26□□□□□ -0.29
PKP2-206ENST00000549461 HDGFP51858 240 aaKnown RBP13.26□□□□□ -0.29
PKP2-206ENST00000549461 USP47Q96K76 1375 aa13.26□□□□□ -0.29
PKP2-206ENST00000549461 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
PKP2-206ENST00000549461 NPHP4O75161 1426 aaPredicted RBP13.23□□□□□ -0.29
PKP2-206ENST00000549461 EIF4G2P78344 907 aaKnown RBP eCLIP13.23□□□□□ -0.29
PKP2-206ENST00000549461 STK26Q9P289 416 aa13.23□□□□□ -0.29
PKP2-206ENST00000549461 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
PKP2-206ENST00000549461 STRCQ7RTU9 1775 aa13.22□□□□□ -0.29
PKP2-206ENST00000549461 TRAK1Q9UPV9 953 aa13.22□□□□□ -0.29
PKP2-206ENST00000549461 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
PKP2-206ENST00000549461 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.29
PKP2-206ENST00000549461 DIP2AQ14689 1571 aa13.2□□□□□ -0.3
PKP2-206ENST00000549461 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
PKP2-206ENST00000549461 ARHGEF28Q8N1W1 1705 aaKnown RBP13.19□□□□□ -0.3
PKP2-206ENST00000549461 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
PKP2-206ENST00000549461 C11orf95C9JLR9 678 aaPredicted RBP13.19□□□□□ -0.3
PKP2-206ENST00000549461 TBX22Q9Y458 520 aa13.19□□□□□ -0.3
PKP2-206ENST00000549461 PLEKHH1Q9ULM0 1364 aa13.18□□□□□ -0.3
PKP2-206ENST00000549461 TESK2Q96S53 571 aa13.17□□□□□ -0.3
PKP2-206ENST00000549461 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
PKP2-206ENST00000549461 WAPLQ7Z5K2 1190 aa13.16□□□□□ -0.3
PKP2-206ENST00000549461 ABCC11Q96J66 1382 aa13.16□□□□□ -0.3
PKP2-206ENST00000549461 ROBO2Q9HCK4 1378 aa13.16□□□□□ -0.3
PKP2-206ENST00000549461 KNDC1Q76NI1 1749 aa13.16□□□□□ -0.3
PKP2-206ENST00000549461 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
PKP2-206ENST00000549461 CPS1P31327 1500 aa13.15□□□□□ -0.3
PKP2-206ENST00000549461 PRAM1Q96QH2 718 aa13.15□□□□□ -0.3
PKP2-206ENST00000549461 AMOTL2Q9Y2J4 779 aa13.15□□□□□ -0.3
PKP2-206ENST00000549461 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.31
PKP2-206ENST00000549461 TECPR2O15040 1411 aa13.14□□□□□ -0.31
PKP2-206ENST00000549461 DLC1Q96QB1 1528 aa13.14□□□□□ -0.31
PKP2-206ENST00000549461 KCNA6P17658 529 aa13.14□□□□□ -0.31
PKP2-206ENST00000549461 EIF3AQ14152 1382 aaKnown RBP13.14□□□□□ -0.31
PKP2-206ENST00000549461 DISP3Q9P2K9 1392 aa13.14□□□□□ -0.31
PKP2-206ENST00000549461 CENPJQ9HC77 1338 aaPredicted RBP13.13□□□□□ -0.31
PKP2-206ENST00000549461 CHD2O14647 1828 aaKnown RBP13.13□□□□□ -0.31
PKP2-206ENST00000549461 STRCP1A6NGW2 1772 aa13.12□□□□□ -0.31
PKP2-206ENST00000549461 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
PKP2-206ENST00000549461 RBM33Q96EV2 1170 aaKnown RBP13.12□□□□□ -0.31
PKP2-206ENST00000549461 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
PKP2-206ENST00000549461 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
PKP2-206ENST00000549461 KIF7Q2M1P5 1343 aa13.11□□□□□ -0.31
PKP2-206ENST00000549461 MINK1Q8N4C8 1332 aaPredicted RBP13.11□□□□□ -0.31
PKP2-206ENST00000549461 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.1□□□□□ -0.31
PKP2-206ENST00000549461 TULP4Q9NRJ4 1543 aa13.1□□□□□ -0.31
PKP2-206ENST00000549461 POGKQ9P215 609 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms