RNA–Protein interactions for RNA: ENST00000549455.1

ATXN2-218, Transcript of ataxin 2, humanhuman

TSL 4

Gene ATXN2, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-218ENST00000549455 ROBO1Q9Y6N7 1651 aa22.47■■□□□ 1.19
ATXN2-218ENST00000549455 SLC52A1Q9NWF4 448 aa22.47■■□□□ 1.19
ATXN2-218ENST00000549455 RBM33Q96EV2 1170 aaKnown RBP22.46■■□□□ 1.19
ATXN2-218ENST00000549455 PROSER2Q86WR7 435 aaPredicted RBP22.45■■□□□ 1.18
ATXN2-218ENST00000549455 NKTRP30414 1462 aaKnown RBP22.45■■□□□ 1.18
ATXN2-218ENST00000549455 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
ATXN2-218ENST00000549455 TMEM131LA2VDJ0 1609 aa22.43■■□□□ 1.18
ATXN2-218ENST00000549455 E9PCH4 1651 aa22.42■■□□□ 1.18
ATXN2-218ENST00000549455 CHD2O14647 1828 aaKnown RBP22.42■■□□□ 1.18
ATXN2-218ENST00000549455 ZFYVE9O95405 1425 aa22.41■■□□□ 1.18
ATXN2-218ENST00000549455 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
ATXN2-218ENST00000549455 RIMS2Q9UQ26 1411 aa22.4■■□□□ 1.18
ATXN2-218ENST00000549455 PLEKHG1Q9ULL1 1385 aa22.39■■□□□ 1.18
ATXN2-218ENST00000549455 IQGAP3Q86VI3 1631 aa22.38■■□□□ 1.17
ATXN2-218ENST00000549455 MSH6P52701 1360 aa22.38■■□□□ 1.17
ATXN2-218ENST00000549455 CHGAP10645 457 aaKnown RBP22.37■■□□□ 1.17
ATXN2-218ENST00000549455 PHLPP1O60346 1717 aa22.36■■□□□ 1.17
ATXN2-218ENST00000549455 HDGFP51858 240 aaKnown RBP22.34■■□□□ 1.17
ATXN2-218ENST00000549455 RGS17Q9UGC6 210 aaPredicted RBP22.34■■□□□ 1.17
ATXN2-218ENST00000549455 ROCK1Q13464 1354 aa22.33■■□□□ 1.17
ATXN2-218ENST00000549455 NUTM2DQ5VT03 806 aaPredicted RBP22.31■■□□□ 1.16
ATXN2-218ENST00000549455 DIP2AQ14689 1571 aa22.3■■□□□ 1.16
ATXN2-218ENST00000549455 ITGAEP38570 1179 aa22.3■■□□□ 1.16
ATXN2-218ENST00000549455 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.3■■□□□ 1.16
ATXN2-218ENST00000549455 SLAIN2Q9P270 581 aa22.28■■□□□ 1.16
ATXN2-218ENST00000549455 NUP155O75694 1391 aa22.27■■□□□ 1.16
ATXN2-218ENST00000549455 ADAMTS13Q76LX8 1427 aa22.27■■□□□ 1.16
ATXN2-218ENST00000549455 C14orf37Q86TY3 774 aa22.27■■□□□ 1.16
ATXN2-218ENST00000549455 TBX22Q9Y458 520 aa22.27■■□□□ 1.16
ATXN2-218ENST00000549455 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.26■■□□□ 1.15
ATXN2-218ENST00000549455 SPHKAPQ2M3C7 1700 aa22.26■■□□□ 1.15
ATXN2-218ENST00000549455 COL16A1Q07092 1604 aaPredicted RBP22.24■■□□□ 1.15
ATXN2-218ENST00000549455 TRPM2O94759 1503 aa22.24■■□□□ 1.15
ATXN2-218ENST00000549455 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
ATXN2-218ENST00000549455 POTEAQ6S8J7 498 aa22.22■■□□□ 1.15
ATXN2-218ENST00000549455 JCADQ9P266 1359 aa22.22■■□□□ 1.15
ATXN2-218ENST00000549455 NCOA3Q9Y6Q9 1424 aa22.22■■□□□ 1.15
ATXN2-218ENST00000549455 PIK3R4Q99570 1358 aa22.21■■□□□ 1.15
ATXN2-218ENST00000549455 SETD1AO15047 1707 aaKnown RBP22.19■■□□□ 1.14
ATXN2-218ENST00000549455 NRXN3Q9Y4C0 1643 aa22.18■■□□□ 1.14
ATXN2-218ENST00000549455 PTPRUQ92729 1446 aa22.16■■□□□ 1.14
ATXN2-218ENST00000549455 ATF3P18847 181 aa22.16■■□□□ 1.14
ATXN2-218ENST00000549455 CADPS2Q86UW7 1296 aa22.16■■□□□ 1.14
ATXN2-218ENST00000549455 XRN1Q8IZH2 1706 aaKnown RBP22.16■■□□□ 1.14
ATXN2-218ENST00000549455 AHDC1Q5TGY3 1603 aaPredicted RBP22.16■■□□□ 1.14
ATXN2-218ENST00000549455 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
ATXN2-218ENST00000549455 SHPRHQ149N8 1683 aa22.14■■□□□ 1.14
ATXN2-218ENST00000549455 SETBP1Q9Y6X0 1596 aa22.14■■□□□ 1.13
ATXN2-218ENST00000549455 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.13
ATXN2-218ENST00000549455 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
ATXN2-218ENST00000549455 LRP6O75581 1613 aa22.13■■□□□ 1.13
ATXN2-218ENST00000549455 CLTCL1P53675 1640 aa22.13■■□□□ 1.13
ATXN2-218ENST00000549455 KIF1BO60333 1816 aa22.12■■□□□ 1.13
ATXN2-218ENST00000549455 MEX3CQ5U5Q3 659 aaKnown RBP22.1■■□□□ 1.13
ATXN2-218ENST00000549455 SPATA31A6Q5VVP1 1343 aa22.08■■□□□ 1.13
ATXN2-218ENST00000549455 DCCP43146 1447 aa22.07■■□□□ 1.12
ATXN2-218ENST00000549455 NEXMIFQ5QGS0 1516 aa22.07■■□□□ 1.12
ATXN2-218ENST00000549455 ASXL1Q8IXJ9 1541 aa22.06■■□□□ 1.12
ATXN2-218ENST00000549455 BRINP3Q76B58 766 aa22.06■■□□□ 1.12
ATXN2-218ENST00000549455 NALCNQ8IZF0 1738 aa22.05■■□□□ 1.12
ATXN2-218ENST00000549455 NHSL1Q5SYE7 1610 aa22.05■■□□□ 1.12
ATXN2-218ENST00000549455 METP08581 1390 aa22.04■■□□□ 1.12
ATXN2-218ENST00000549455 MST1RQ04912 1400 aa22.03■■□□□ 1.12
ATXN2-218ENST00000549455 RRBP1Q9P2E9 1410 aaKnown RBP22.02■■□□□ 1.12
ATXN2-218ENST00000549455 NAIPQ13075 1403 aa22.01■■□□□ 1.11
ATXN2-218ENST00000549455 ADGRL3Q9HAR2 1447 aa22■■□□□ 1.11
ATXN2-218ENST00000549455 NUTM2BA6NNL0 878 aaPredicted RBP22■■□□□ 1.11
ATXN2-218ENST00000549455 NUTM2EB1AL46 878 aaPredicted RBP22■■□□□ 1.11
ATXN2-218ENST00000549455 ZNF772Q68DY9 489 aaPredicted RBP22■■□□□ 1.11
ATXN2-218ENST00000549455 NUTM2AQ8IVF1 878 aaPredicted RBP22■■□□□ 1.11
ATXN2-218ENST00000549455 TRIM52Q96A61 297 aa21.97■■□□□ 1.11
ATXN2-218ENST00000549455 SETD5Q9C0A6 1442 aa21.96■■□□□ 1.11
ATXN2-218ENST00000549455 PPLO60437 1756 aa21.94■■□□□ 1.1
ATXN2-218ENST00000549455 DDX17Q92841 729 aaKnown RBP21.93■■□□□ 1.1
ATXN2-218ENST00000549455 LRRC59Q96AG4 307 aaKnown RBP21.91■■□□□ 1.1
ATXN2-218ENST00000549455 HFM1A2PYH4 1435 aa21.9■■□□□ 1.1
ATXN2-218ENST00000549455 PTCH1Q13635 1447 aa21.9■■□□□ 1.1
ATXN2-218ENST00000549455 AFF2P51816 1311 aa21.9■■□□□ 1.1
ATXN2-218ENST00000549455 RXRBP28702 533 aa21.89■■□□□ 1.09
ATXN2-218ENST00000549455 C1orf167Q5SNV9 1468 aa21.89■■□□□ 1.09
ATXN2-218ENST00000549455 PNPLA6Q8IY17 1366 aa21.88■■□□□ 1.09
ATXN2-218ENST00000549455 VGFO15240 615 aaPredicted RBP21.88■■□□□ 1.09
ATXN2-218ENST00000549455 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
ATXN2-218ENST00000549455 ROBO2Q9HCK4 1378 aa21.87■■□□□ 1.09
ATXN2-218ENST00000549455 C8orf37Q96NL8 207 aa21.86■■□□□ 1.09
ATXN2-218ENST00000549455 LAMC1P11047 1609 aa21.86■■□□□ 1.09
ATXN2-218ENST00000549455 UPF1Q92900 1129 aaKnown RBP eCLIP21.85■■□□□ 1.09
ATXN2-218ENST00000549455 CDK12Q9NYV4 1490 aaPredicted RBP21.84■■□□□ 1.09
ATXN2-218ENST00000549455 RPGRIP1LQ68CZ1 1315 aa21.84■■□□□ 1.09
ATXN2-218ENST00000549455 PRAG1Q86YV5 1406 aa21.81■■□□□ 1.08
ATXN2-218ENST00000549455 ORAI2Q96SN7 254 aa21.81■■□□□ 1.08
ATXN2-218ENST00000549455 FOXD1Q16676 465 aa21.8■■□□□ 1.08
ATXN2-218ENST00000549455 ADAMTS2O95450 1211 aa21.79■■□□□ 1.08
ATXN2-218ENST00000549455 IFT172Q9UG01 1749 aa21.79■■□□□ 1.08
ATXN2-218ENST00000549455 RGS12O14924 1447 aa21.78■■□□□ 1.08
ATXN2-218ENST00000549455 CDC42BPGQ6DT37 1551 aa21.78■■□□□ 1.08
ATXN2-218ENST00000549455 QTRT2Q9H974 415 aaKnown RBP21.77■■□□□ 1.08
ATXN2-218ENST00000549455 SOS2Q07890 1332 aaPredicted RBP21.77■■□□□ 1.07
ATXN2-218ENST00000549455 CCDC144AA2RUR9 1427 aa21.76■■□□□ 1.07
ATXN2-218ENST00000549455 NGLY1Q96IV0 654 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms