RNA–Protein interactions for RNA: ENST00000549421.1

TSPAN8-204, Transcript of tetraspanin 8, humanhuman

TSL 3

Gene TSPAN8, Length 246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN8-204ENST00000549421 PPP1R15AO75807 674 aaPredicted RBP7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 USP46P62068 366 aa7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 PACS2Q86VP3 889 aa7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 EYA1Q99502 592 aa7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 PLSCR2Q9NRY7 297 aa7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 CCDC9Q9Y3X0 531 aaKnown RBP7.23□□□□□ -1.25
TSPAN8-204ENST00000549421 NUDT7P0C024 238 aa7.22□□□□□ -1.25
TSPAN8-204ENST00000549421 PTPREP23469 700 aa7.22□□□□□ -1.25
TSPAN8-204ENST00000549421 RSBN1LQ6PCB5 846 aaPredicted RBP7.22□□□□□ -1.25
TSPAN8-204ENST00000549421 POM121Q96HA1 1249 aa7.22□□□□□ -1.25
TSPAN8-204ENST00000549421 KCNH8Q96L42 1107 aa7.22□□□□□ -1.25
TSPAN8-204ENST00000549421 ZNF710Q8N1W2 664 aa7.21□□□□□ -1.26
TSPAN8-204ENST00000549421 LIMD1Q9UGP4 676 aa7.21□□□□□ -1.26
TSPAN8-204ENST00000549421 NLRP7Q8WX94 980 aa7.2□□□□□ -1.26
TSPAN8-204ENST00000549421 TMEM134Q9H6X4 195 aa7.2□□□□□ -1.26
TSPAN8-204ENST00000549421 PATL2C9JE40 543 aaKnown RBP7.19□□□□□ -1.26
TSPAN8-204ENST00000549421 HRCP23327 699 aa7.19□□□□□ -1.26
TSPAN8-204ENST00000549421 ARSIQ5FYB1 569 aa7.19□□□□□ -1.26
TSPAN8-204ENST00000549421 MAMSTRQ6ZN01 415 aa7.19□□□□□ -1.26
TSPAN8-204ENST00000549421 SNRKQ9NRH2 765 aa7.19□□□□□ -1.26
TSPAN8-204ENST00000549421 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 TRIM6-TRIM34B2RNG4 842 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 LILRB3O75022 631 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 SLC4A3P48751 1232 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 GPR153Q6NV75 609 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 MTMR14Q8NCE2 650 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 TATDN2Q93075 761 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 ZBTB3Q9H5J0 574 aa7.18□□□□□ -1.26
TSPAN8-204ENST00000549421 SNPHO15079 494 aa7.17□□□□□ -1.26
TSPAN8-204ENST00000549421 HOXB3P14651 431 aaPredicted RBP7.17□□□□□ -1.26
TSPAN8-204ENST00000549421 WASHC4Q2M389 1173 aa7.17□□□□□ -1.26
TSPAN8-204ENST00000549421 NUDT18Q6ZVK8 323 aa7.17□□□□□ -1.26
TSPAN8-204ENST00000549421 PNMA3Q9UL41 463 aa7.17□□□□□ -1.26
TSPAN8-204ENST00000549421 ACIN1Q9UKV3 1341 aaKnown RBP7.17□□□□□ -1.26
TSPAN8-204ENST00000549421 NUTM2BA6NNL0 878 aaPredicted RBP7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 NUTM2EB1AL46 878 aaPredicted RBP7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 KDM4AO75164 1064 aa7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 POTEIP0CG38 1075 aa7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 NUTM2DQ5VT03 806 aaPredicted RBP7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 NUTM2AQ8IVF1 878 aaPredicted RBP7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 RDH13Q8NBN7 331 aa7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 SCUBE2Q9NQ36 999 aa7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 TSKSQ9UJT2 592 aa7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 NDUFB9Q9Y6M9 179 aa7.16□□□□□ -1.26
TSPAN8-204ENST00000549421 MOXD2PA6NHM9 499 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 AP1G2O75843 785 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 COL9A1P20849 921 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 GRIPAP1Q4V328 841 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 FAM198AQ9UFP1 575 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 LHX6Q9UPM6 363 aa7.15□□□□□ -1.26
TSPAN8-204ENST00000549421 USP17L8P0C7I0 530 aa7.14□□□□□ -1.27
TSPAN8-204ENST00000549421 ABL2P42684 1182 aa7.14□□□□□ -1.27
TSPAN8-204ENST00000549421 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
TSPAN8-204ENST00000549421 NPM2Q86SE8 214 aaKnown RBP7.13□□□□□ -1.27
TSPAN8-204ENST00000549421 HELBQ8NG08 1087 aaPredicted RBP7.13□□□□□ -1.27
TSPAN8-204ENST00000549421 GCGRP47871 477 aa7.12□□□□□ -1.27
TSPAN8-204ENST00000549421 CSPP1Q1MSJ5 1256 aa7.12□□□□□ -1.27
TSPAN8-204ENST00000549421 NECTIN2Q92692 538 aa7.12□□□□□ -1.27
TSPAN8-204ENST00000549421 KHSRPQ92945 711 aaKnown RBP eCLIP7.12□□□□□ -1.27
TSPAN8-204ENST00000549421 HOXA2O43364 376 aa7.11□□□□□ -1.27
TSPAN8-204ENST00000549421 FDX1P10109 184 aa7.11□□□□□ -1.27
TSPAN8-204ENST00000549421 QPCTQ16769 361 aa7.11□□□□□ -1.27
TSPAN8-204ENST00000549421 PNMA1Q8ND90 353 aa7.11□□□□□ -1.27
TSPAN8-204ENST00000549421 GLMNQ92990 594 aa7.11□□□□□ -1.27
TSPAN8-204ENST00000549421 NDUFV2P19404 249 aa7.1□□□□□ -1.27
TSPAN8-204ENST00000549421 SOX11P35716 441 aa7.1□□□□□ -1.27
TSPAN8-204ENST00000549421 SP7Q8TDD2 431 aaPredicted RBP7.1□□□□□ -1.27
TSPAN8-204ENST00000549421 TBC1D2BQ9UPU7 963 aa7.1□□□□□ -1.27
TSPAN8-204ENST00000549421 HOXB1P14653 301 aaPredicted RBP7.09□□□□□ -1.27
TSPAN8-204ENST00000549421 MTMR2Q13614 643 aa7.09□□□□□ -1.27
TSPAN8-204ENST00000549421 RTL5Q5HYW3 569 aaPredicted RBP7.09□□□□□ -1.27
TSPAN8-204ENST00000549421 RETREG2Q8NC44 543 aa7.09□□□□□ -1.27
TSPAN8-204ENST00000549421 PBXIP1Q96AQ6 731 aa7.09□□□□□ -1.27
TSPAN8-204ENST00000549421 USTQ9Y2C2 406 aa7.09□□□□□ -1.27
TSPAN8-204ENST00000549421 FBXO31Q5XUX0 539 aaPredicted RBP7.08□□□□□ -1.28
TSPAN8-204ENST00000549421 SLF2Q8IX21 1173 aa7.08□□□□□ -1.28
TSPAN8-204ENST00000549421 SLC4A5Q9BY07 1137 aa7.08□□□□□ -1.28
TSPAN8-204ENST00000549421 PCDHB15Q9Y5E8 787 aa7.08□□□□□ -1.28
TSPAN8-204ENST00000549421 GJD4Q96KN9 370 aaPredicted RBP7.07□□□□□ -1.28
TSPAN8-204ENST00000549421 RABGEF1Q9UJ41 708 aa7.07□□□□□ -1.28
TSPAN8-204ENST00000549421 POTEHQ6S545 545 aa7.06□□□□□ -1.28
TSPAN8-204ENST00000549421 CABLES1Q8TDN4 633 aa7.06□□□□□ -1.28
TSPAN8-204ENST00000549421 KCNK17Q96T54 332 aa7.06□□□□□ -1.28
TSPAN8-204ENST00000549421 ZBED2Q9BTP6 218 aa7.05□□□□□ -1.28
TSPAN8-204ENST00000549421 CSB-PGBD3P0DP91 1061 aa7.04□□□□□ -1.28
TSPAN8-204ENST00000549421 KCNA1Q09470 495 aa7.04□□□□□ -1.28
TSPAN8-204ENST00000549421 HDGFL1Q5TGJ6 251 aa7.04□□□□□ -1.28
TSPAN8-204ENST00000549421 LAPTM4BQ86VI4 370 aa7.04□□□□□ -1.28
TSPAN8-204ENST00000549421 AEBP1Q8IUX7 1158 aa7.04□□□□□ -1.28
TSPAN8-204ENST00000549421 KIAA1468Q9P260 1216 aa7.04□□□□□ -1.28
TSPAN8-204ENST00000549421 POM121CA8CG34 1229 aa7.03□□□□□ -1.28
TSPAN8-204ENST00000549421 IRF5Q13568 498 aa7.03□□□□□ -1.28
TSPAN8-204ENST00000549421 FAM98CQ17RN3 349 aaKnown RBP7.03□□□□□ -1.28
TSPAN8-204ENST00000549421 PROX2Q3B8N5 592 aa7.03□□□□□ -1.28
TSPAN8-204ENST00000549421 KMT5BQ4FZB7 885 aa7.03□□□□□ -1.28
TSPAN8-204ENST00000549421 SWT1Q5T5J6 900 aaKnown RBP7.03□□□□□ -1.28
TSPAN8-204ENST00000549421 C3orf80F5H4A9 247 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms