RNA–Protein interactions for RNA: ENST00000549416.1

PRDM4-204, Transcript of PR/SET domain 4, humanhuman

TSL 2

Gene PRDM4, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-204ENST00000549416 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
PRDM4-204ENST00000549416 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
PRDM4-204ENST00000549416 MS4A1P11836 297 aa10.2□□□□□ -0.78
PRDM4-204ENST00000549416 SAMD7Q7Z3H4 446 aa10.2□□□□□ -0.78
PRDM4-204ENST00000549416 FAM217BQ9NTX9 383 aaPredicted RBP10.2□□□□□ -0.78
PRDM4-204ENST00000549416 SSTR3P32745 418 aaPredicted RBP10.18□□□□□ -0.78
PRDM4-204ENST00000549416 STAC3Q96MF2 364 aa10.18□□□□□ -0.78
PRDM4-204ENST00000549416 PCDH10Q9P2E7 1040 aa10.18□□□□□ -0.78
PRDM4-204ENST00000549416 FAM117AQ9C073 453 aa10.16□□□□□ -0.78
PRDM4-204ENST00000549416 GOLGA8CPA6NN73 597 aa10.15□□□□□ -0.78
PRDM4-204ENST00000549416 DDX11L8A8MPP1 907 aa10.14□□□□□ -0.79
PRDM4-204ENST00000549416 SLC10A3P09131 477 aa10.14□□□□□ -0.79
PRDM4-204ENST00000549416 HDGFP51858 240 aaKnown RBP10.14□□□□□ -0.79
PRDM4-204ENST00000549416 CD46P15529 392 aa10.13□□□□□ -0.79
PRDM4-204ENST00000549416 WNT2BQ93097 391 aa10.13□□□□□ -0.79
PRDM4-204ENST00000549416 PLEKHG3A1L390 1219 aa10.12□□□□□ -0.79
PRDM4-204ENST00000549416 SOWAHBA6NEL2 793 aa10.12□□□□□ -0.79
PRDM4-204ENST00000549416 BCAMP50895 628 aa10.12□□□□□ -0.79
PRDM4-204ENST00000549416 SULF1Q8IWU6 871 aa10.12□□□□□ -0.79
PRDM4-204ENST00000549416 ANKK1Q8NFD2 765 aa10.12□□□□□ -0.79
PRDM4-204ENST00000549416 LRCH3Q96II8 777 aa10.12□□□□□ -0.79
PRDM4-204ENST00000549416 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.12□□□□□ -0.79
PRDM4-204ENST00000549416 SLF2Q8IX21 1173 aa10.11□□□□□ -0.79
PRDM4-204ENST00000549416 IL27Q8NEV9 243 aa10.11□□□□□ -0.79
PRDM4-204ENST00000549416 BEGAINQ9BUH8 593 aa10.11□□□□□ -0.79
PRDM4-204ENST00000549416 SPNS2Q8IVW8 549 aa10.1□□□□□ -0.79
PRDM4-204ENST00000549416 RNF40O75150 1001 aa10.09□□□□□ -0.79
PRDM4-204ENST00000549416 RDH13Q8NBN7 331 aa10.09□□□□□ -0.79
PRDM4-204ENST00000549416 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
PRDM4-204ENST00000549416 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
PRDM4-204ENST00000549416 THSD4Q6ZMP0 1018 aa10.08□□□□□ -0.8
PRDM4-204ENST00000549416 MYT1LQ9UL68 1186 aa10.07□□□□□ -0.8
PRDM4-204ENST00000549416 HPS5Q9UPZ3 1129 aa10.07□□□□□ -0.8
PRDM4-204ENST00000549416 GCGRP47871 477 aa10.06□□□□□ -0.8
PRDM4-204ENST00000549416 SLC4A3P48751 1232 aa10.06□□□□□ -0.8
PRDM4-204ENST00000549416 TMEM132AQ24JP5 1023 aa10.05□□□□□ -0.8
PRDM4-204ENST00000549416 RSPH4AQ5TD94 716 aa10.05□□□□□ -0.8
PRDM4-204ENST00000549416 TSR3Q9UJK0 312 aaKnown RBP10.05□□□□□ -0.8
PRDM4-204ENST00000549416 CFHP08603 1231 aa10.04□□□□□ -0.8
PRDM4-204ENST00000549416 PPP4CP60510 307 aa10.04□□□□□ -0.8
PRDM4-204ENST00000549416 SPIRE2Q8WWL2 714 aa10.04□□□□□ -0.8
PRDM4-204ENST00000549416 WBP1LQ9NX94 342 aa10.03□□□□□ -0.8
PRDM4-204ENST00000549416 TBC1D2Q9BYX2 928 aa10.02□□□□□ -0.81
PRDM4-204ENST00000549416 KDM4AO75164 1064 aa10.01□□□□□ -0.81
PRDM4-204ENST00000549416 APLP1P51693 650 aa10.01□□□□□ -0.81
PRDM4-204ENST00000549416 NUTM1Q86Y26 1132 aa10□□□□□ -0.81
PRDM4-204ENST00000549416 NECTIN2Q92692 538 aa10□□□□□ -0.81
PRDM4-204ENST00000549416 PTPN5P54829 565 aa9.99□□□□□ -0.81
PRDM4-204ENST00000549416 KMT5BQ4FZB7 885 aa9.99□□□□□ -0.81
PRDM4-204ENST00000549416 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
PRDM4-204ENST00000549416 RNF166Q96A37 237 aaPredicted RBP9.99□□□□□ -0.81
PRDM4-204ENST00000549416 ACTN4O43707 911 aaKnown RBP9.98□□□□□ -0.81
PRDM4-204ENST00000549416 FUT2Q10981 343 aa9.98□□□□□ -0.81
PRDM4-204ENST00000549416 SH3D19Q5HYK7 790 aa9.98□□□□□ -0.81
PRDM4-204ENST00000549416 MOXD2PA6NHM9 499 aa9.97□□□□□ -0.81
PRDM4-204ENST00000549416 HOXA2O43364 376 aa9.97□□□□□ -0.81
PRDM4-204ENST00000549416 DIXDC1Q155Q3 683 aa9.97□□□□□ -0.81
PRDM4-204ENST00000549416 RSPH6AQ9H0K4 717 aa9.97□□□□□ -0.81
PRDM4-204ENST00000549416 NDUFV2P19404 249 aa9.96□□□□□ -0.82
PRDM4-204ENST00000549416 USP46P62068 366 aa9.96□□□□□ -0.82
PRDM4-204ENST00000549416 MMRN1Q13201 1228 aa9.96□□□□□ -0.82
PRDM4-204ENST00000549416 HLA-CQ95604 372 aa9.96□□□□□ -0.82
PRDM4-204ENST00000549416 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
PRDM4-204ENST00000549416 SKIV2LQ15477 1246 aaKnown RBP9.95□□□□□ -0.82
PRDM4-204ENST00000549416 POLR3EQ9NVU0 708 aa9.95□□□□□ -0.82
PRDM4-204ENST00000549416 ATP6V1AP38606 617 aa9.94□□□□□ -0.82
PRDM4-204ENST00000549416 GUCA2AQ02747 115 aa9.94□□□□□ -0.82
PRDM4-204ENST00000549416 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
PRDM4-204ENST00000549416 RSBN1LQ6PCB5 846 aaPredicted RBP9.94□□□□□ -0.82
PRDM4-204ENST00000549416 PRR14Q9BWN1 585 aa9.94□□□□□ -0.82
PRDM4-204ENST00000549416 LIMD1Q9UGP4 676 aa9.94□□□□□ -0.82
PRDM4-204ENST00000549416 SPTLC1O15269 473 aa9.93□□□□□ -0.82
PRDM4-204ENST00000549416 RIC3Q7Z5B4 369 aa9.93□□□□□ -0.82
PRDM4-204ENST00000549416 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
PRDM4-204ENST00000549416 CLK2P49760 499 aaKnown RBP9.92□□□□□ -0.82
PRDM4-204ENST00000549416 MORN1Q5T089 497 aa9.92□□□□□ -0.82
PRDM4-204ENST00000549416 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
PRDM4-204ENST00000549416 GRIPAP1Q4V328 841 aa9.91□□□□□ -0.82
PRDM4-204ENST00000549416 PCDHGC3Q9UN70 934 aa9.91□□□□□ -0.82
PRDM4-204ENST00000549416 PCDHB15Q9Y5E8 787 aa9.91□□□□□ -0.82
PRDM4-204ENST00000549416 FDX1P10109 184 aa9.9□□□□□ -0.82
PRDM4-204ENST00000549416 GJA5P36382 358 aa9.9□□□□□ -0.82
PRDM4-204ENST00000549416 BLOC1S3Q6QNY0 202 aa9.9□□□□□ -0.82
PRDM4-204ENST00000549416 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.9□□□□□ -0.82
PRDM4-204ENST00000549416 HCSTQ9UBK5 93 aa9.9□□□□□ -0.82
PRDM4-204ENST00000549416 PCDHB3Q9Y5E6 796 aa9.9□□□□□ -0.82
PRDM4-204ENST00000549416 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
PRDM4-204ENST00000549416 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
PRDM4-204ENST00000549416 SLC27A5Q9Y2P5 690 aa9.89□□□□□ -0.83
PRDM4-204ENST00000549416 TUSC1Q2TAM9 212 aa9.88□□□□□ -0.83
PRDM4-204ENST00000549416 SCUBE3Q8IX30 993 aa9.87□□□□□ -0.83
PRDM4-204ENST00000549416 COPS2P61201 443 aa9.86□□□□□ -0.83
PRDM4-204ENST00000549416 QPCTQ16769 361 aa9.86□□□□□ -0.83
PRDM4-204ENST00000549416 CSPP1Q1MSJ5 1256 aa9.86□□□□□ -0.83
PRDM4-204ENST00000549416 MTRQ99707 1265 aa9.86□□□□□ -0.83
PRDM4-204ENST00000549416 TJAP1Q5JTD0 557 aa9.85□□□□□ -0.83
PRDM4-204ENST00000549416 SYMPKQ92797 1274 aaKnown RBP9.85□□□□□ -0.83
PRDM4-204ENST00000549416 LILRB3O75022 631 aa9.84□□□□□ -0.83
PRDM4-204ENST00000549416 CABLES1Q8TDN4 633 aa9.84□□□□□ -0.83
PRDM4-204ENST00000549416 THAP11Q96EK4 314 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms