RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 ZMYM4Q5VZL5 1548 aa15.58■□□□□ 0.08
RAPGEF3-219ENST00000549151 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF3-219ENST00000549151 BCAR3O75815 825 aa15.57■□□□□ 0.08
RAPGEF3-219ENST00000549151 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF3-219ENST00000549151 MAST1Q9Y2H9 1570 aa15.57■□□□□ 0.08
RAPGEF3-219ENST00000549151 CHD1O14646 1710 aa15.56■□□□□ 0.08
RAPGEF3-219ENST00000549151 PLCH2O75038 1416 aa15.55■□□□□ 0.08
RAPGEF3-219ENST00000549151 RTN4Q9NQC3 1192 aaKnown RBP15.55■□□□□ 0.08
RAPGEF3-219ENST00000549151 CANXP27824 592 aaKnown RBP15.55■□□□□ 0.08
RAPGEF3-219ENST00000549151 CENPQQ7L2Z9 268 aaPredicted RBP15.55■□□□□ 0.08
RAPGEF3-219ENST00000549151 SLFN5Q08AF3 891 aa15.54■□□□□ 0.08
RAPGEF3-219ENST00000549151 ABCC2Q92887 1545 aa15.54■□□□□ 0.08
RAPGEF3-219ENST00000549151 PLXNC1O60486 1568 aa15.54■□□□□ 0.08
RAPGEF3-219ENST00000549151 DMRT2Q9Y5R5 561 aa15.53■□□□□ 0.08
RAPGEF3-219ENST00000549151 DDRGK1Q96HY6 314 aa15.53■□□□□ 0.08
RAPGEF3-219ENST00000549151 SCAF11Q99590 1463 aaKnown RBP15.52■□□□□ 0.08
RAPGEF3-219ENST00000549151 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.08
RAPGEF3-219ENST00000549151 KDM2BQ8NHM5 1336 aa15.52■□□□□ 0.08
RAPGEF3-219ENST00000549151 LAMC1P11047 1609 aa15.52■□□□□ 0.07
RAPGEF3-219ENST00000549151 ADGRF5Q8IZF2 1346 aa15.52■□□□□ 0.07
RAPGEF3-219ENST00000549151 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-219ENST00000549151 ATP10AO60312 1499 aa15.51■□□□□ 0.07
RAPGEF3-219ENST00000549151 FRAT1Q92837 279 aaPredicted RBP15.51■□□□□ 0.07
RAPGEF3-219ENST00000549151 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
RAPGEF3-219ENST00000549151 IL27Q8NEV9 243 aa15.5■□□□□ 0.07
RAPGEF3-219ENST00000549151 EIF3AQ14152 1382 aaKnown RBP15.5■□□□□ 0.07
RAPGEF3-219ENST00000549151 KANK1Q14678 1352 aa15.5■□□□□ 0.07
RAPGEF3-219ENST00000549151 ASXL1Q8IXJ9 1541 aa15.5■□□□□ 0.07
RAPGEF3-219ENST00000549151 FAM161AQ3B820 660 aa15.49■□□□□ 0.07
RAPGEF3-219ENST00000549151 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
RAPGEF3-219ENST00000549151 TRAK1Q9UPV9 953 aa15.49■□□□□ 0.07
RAPGEF3-219ENST00000549151 MADDQ8WXG6 1647 aa15.49■□□□□ 0.07
RAPGEF3-219ENST00000549151 INSRP06213 1382 aa15.48■□□□□ 0.07
RAPGEF3-219ENST00000549151 SCAPERQ9BY12 1400 aa15.48■□□□□ 0.07
RAPGEF3-219ENST00000549151 PANK1Q8TE04 598 aa15.48■□□□□ 0.07
RAPGEF3-219ENST00000549151 COG6Q9Y2V7 657 aa15.48■□□□□ 0.07
RAPGEF3-219ENST00000549151 C8orf34Q49A92 452 aa15.47■□□□□ 0.07
RAPGEF3-219ENST00000549151 NUTM2DQ5VT03 806 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-219ENST00000549151 RNF17Q9BXT8 1623 aaKnown RBP15.47■□□□□ 0.07
RAPGEF3-219ENST00000549151 UGGT1Q9NYU2 1555 aa15.46■□□□□ 0.07
RAPGEF3-219ENST00000549151 ABCC1P33527 1531 aa15.46■□□□□ 0.07
RAPGEF3-219ENST00000549151 BCL2L13Q9BXK5 485 aa15.46■□□□□ 0.07
RAPGEF3-219ENST00000549151 E9PSI1 815 aa15.46■□□□□ 0.06
RAPGEF3-219ENST00000549151 TMEM132EQ6IEE7 984 aa15.45■□□□□ 0.06
RAPGEF3-219ENST00000549151 MORC1Q86VD1 984 aa15.45■□□□□ 0.06
RAPGEF3-219ENST00000549151 CLTCL1P53675 1640 aa15.45■□□□□ 0.06
RAPGEF3-219ENST00000549151 NFKBIBQ15653 356 aa15.45■□□□□ 0.06
RAPGEF3-219ENST00000549151 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
RAPGEF3-219ENST00000549151 IGHDP01880 384 aa15.44■□□□□ 0.06
RAPGEF3-219ENST00000549151 SLC12A5Q9H2X9 1139 aa15.44■□□□□ 0.06
RAPGEF3-219ENST00000549151 PIK3C2GO75747 1445 aa15.44■□□□□ 0.06
RAPGEF3-219ENST00000549151 USP35Q9P2H5 1018 aa15.44■□□□□ 0.06
RAPGEF3-219ENST00000549151 CENPJQ9HC77 1338 aaPredicted RBP15.43■□□□□ 0.06
RAPGEF3-219ENST00000549151 IQGAP1P46940 1657 aa15.43■□□□□ 0.06
RAPGEF3-219ENST00000549151 NKTRP30414 1462 aaKnown RBP15.43■□□□□ 0.06
RAPGEF3-219ENST00000549151 GGT6Q6P531 493 aa15.43■□□□□ 0.06
RAPGEF3-219ENST00000549151 TRPM2O94759 1503 aa15.43■□□□□ 0.06
RAPGEF3-219ENST00000549151 SYNMO15061 1565 aa15.42■□□□□ 0.06
RAPGEF3-219ENST00000549151 CLUAP1Q96AJ1 413 aa15.42■□□□□ 0.06
RAPGEF3-219ENST00000549151 SAFB2Q14151 953 aaKnown RBP eCLIP15.42■□□□□ 0.06
RAPGEF3-219ENST00000549151 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
RAPGEF3-219ENST00000549151 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-219ENST00000549151 STAC3Q96MF2 364 aa15.41■□□□□ 0.06
RAPGEF3-219ENST00000549151 SPHKAPQ2M3C7 1700 aa15.4■□□□□ 0.06
RAPGEF3-219ENST00000549151 PTPRTO14522 1441 aa15.4■□□□□ 0.06
RAPGEF3-219ENST00000549151 CFAP65Q6ZU64 1925 aaKnown RBP15.4■□□□□ 0.06
RAPGEF3-219ENST00000549151 SHROOM2Q13796 1616 aa15.4■□□□□ 0.06
RAPGEF3-219ENST00000549151 TNNQ9UQP3 1299 aa15.4■□□□□ 0.06
RAPGEF3-219ENST00000549151 ZFYVE16Q7Z3T8 1539 aa15.4■□□□□ 0.06
RAPGEF3-219ENST00000549151 ERVK-7P63135 1459 aa15.39■□□□□ 0.05
RAPGEF3-219ENST00000549151 FANCAO15360 1455 aa15.39■□□□□ 0.05
RAPGEF3-219ENST00000549151 TCP11L2Q8N4U5 519 aa15.38■□□□□ 0.05
RAPGEF3-219ENST00000549151 NSD3Q9BZ95 1437 aa15.38■□□□□ 0.05
RAPGEF3-219ENST00000549151 KDM5AP29375 1690 aaKnown RBP15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 FRAT2O75474 233 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 CEP152O94986 1710 aa15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 MTHFSP49914 203 aa15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 MYOM1P52179 1685 aa15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 RTEL1-TNFRSF6BF6WH68 1400 aa15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 NOS1P29475 1434 aa15.37■□□□□ 0.05
RAPGEF3-219ENST00000549151 SEC24BO95487 1268 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 GSE1Q14687 1217 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 ADGRL1O94910 1474 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 BRPF3Q9ULD4 1205 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 ATP7AQ04656 1500 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 CGNL1Q0VF96 1302 aa15.36■□□□□ 0.05
RAPGEF3-219ENST00000549151 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF3-219ENST00000549151 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
RAPGEF3-219ENST00000549151 SLKQ9H2G2 1235 aaPredicted RBP15.34■□□□□ 0.05
RAPGEF3-219ENST00000549151 SLC24A1O60721 1099 aa15.34■□□□□ 0.05
RAPGEF3-219ENST00000549151 RLBP1P12271 317 aa15.33■□□□□ 0.04
RAPGEF3-219ENST00000549151 PDE3AQ14432 1141 aa15.33■□□□□ 0.04
RAPGEF3-219ENST00000549151 RUNDC1Q96C34 613 aa15.33■□□□□ 0.04
RAPGEF3-219ENST00000549151 TET3O43151 1660 aa15.33■□□□□ 0.04
RAPGEF3-219ENST00000549151 RARSP54136 660 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-219ENST00000549151 STK26Q9P289 416 aa15.32■□□□□ 0.04
RAPGEF3-219ENST00000549151 ABCA6Q8N139 1617 aa15.32■□□□□ 0.04
RAPGEF3-219ENST00000549151 U2SURPO15042 1029 aaKnown RBP15.31■□□□□ 0.04
RAPGEF3-219ENST00000549151 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms