RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
RAB5B-205ENST00000549034 PPP1R15AO75807 674 aaPredicted RBP14.05□□□□□ -0.16
RAB5B-205ENST00000549034 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.05□□□□□ -0.16
RAB5B-205ENST00000549034 KIF1BO60333 1816 aa14.05□□□□□ -0.16
RAB5B-205ENST00000549034 TMEM131LA2VDJ0 1609 aa14.04□□□□□ -0.16
RAB5B-205ENST00000549034 CCDC144AA2RUR9 1427 aa14.04□□□□□ -0.16
RAB5B-205ENST00000549034 ADGRB3O60242 1522 aa14.04□□□□□ -0.16
RAB5B-205ENST00000549034 TRPM2O94759 1503 aa14.04□□□□□ -0.16
RAB5B-205ENST00000549034 CLTCL1P53675 1640 aa14.04□□□□□ -0.16
RAB5B-205ENST00000549034 RIMS2Q9UQ26 1411 aa14.03□□□□□ -0.16
RAB5B-205ENST00000549034 KDM5AP29375 1690 aaKnown RBP14.03□□□□□ -0.16
RAB5B-205ENST00000549034 ANKRD30BQ9BXX2 1392 aa14.02□□□□□ -0.17
RAB5B-205ENST00000549034 SLIT1O75093 1534 aa14.01□□□□□ -0.17
RAB5B-205ENST00000549034 ARHGAP23Q9P227 1491 aa14.01□□□□□ -0.17
RAB5B-205ENST00000549034 NPHP4O75161 1426 aaPredicted RBP14.01□□□□□ -0.17
RAB5B-205ENST00000549034 POLR1AO95602 1720 aaPredicted RBP14.01□□□□□ -0.17
RAB5B-205ENST00000549034 SCAF11Q99590 1463 aaKnown RBP14□□□□□ -0.17
RAB5B-205ENST00000549034 SLC26A8Q96RN1 970 aa14□□□□□ -0.17
RAB5B-205ENST00000549034 RPGRIP1LQ68CZ1 1315 aa13.99□□□□□ -0.17
RAB5B-205ENST00000549034 VGFO15240 615 aaPredicted RBP13.99□□□□□ -0.17
RAB5B-205ENST00000549034 MED14O60244 1454 aa13.98□□□□□ -0.17
RAB5B-205ENST00000549034 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
RAB5B-205ENST00000549034 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
RAB5B-205ENST00000549034 ZFYVE9O95405 1425 aa13.97□□□□□ -0.17
RAB5B-205ENST00000549034 DHX57Q6P158 1386 aaKnown RBP13.96□□□□□ -0.17
RAB5B-205ENST00000549034 NEURL4Q96JN8 1562 aa13.96□□□□□ -0.17
RAB5B-205ENST00000549034 ZNF335Q9H4Z2 1342 aaPredicted RBP13.96□□□□□ -0.17
RAB5B-205ENST00000549034 IQGAP1P46940 1657 aa13.95□□□□□ -0.18
RAB5B-205ENST00000549034 KDM2AQ9Y2K7 1162 aa13.95□□□□□ -0.18
RAB5B-205ENST00000549034 PLEKHG1Q9ULL1 1385 aa13.95□□□□□ -0.18
RAB5B-205ENST00000549034 NPM3O75607 178 aaKnown RBP13.94□□□□□ -0.18
RAB5B-205ENST00000549034 DCAF11Q8TEB1 546 aa13.94□□□□□ -0.18
RAB5B-205ENST00000549034 TBX22Q9Y458 520 aa13.94□□□□□ -0.18
RAB5B-205ENST00000549034 SPATA31E1Q6ZUB1 1445 aa13.93□□□□□ -0.18
RAB5B-205ENST00000549034 ADGRF5Q8IZF2 1346 aa13.91□□□□□ -0.18
RAB5B-205ENST00000549034 NEXMIFQ5QGS0 1516 aa13.91□□□□□ -0.18
RAB5B-205ENST00000549034 CERKQ8TCT0 537 aa13.91□□□□□ -0.18
RAB5B-205ENST00000549034 KCNA6P17658 529 aa13.9□□□□□ -0.18
RAB5B-205ENST00000549034 PPLO60437 1756 aa13.89□□□□□ -0.19
RAB5B-205ENST00000549034 PROSER2Q86WR7 435 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-205ENST00000549034 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
RAB5B-205ENST00000549034 CCER1Q8TC90 406 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-205ENST00000549034 STAC3Q96MF2 364 aa13.87□□□□□ -0.19
RAB5B-205ENST00000549034 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
RAB5B-205ENST00000549034 AMOTL2Q9Y2J4 779 aa13.87□□□□□ -0.19
RAB5B-205ENST00000549034 ADAMTS13Q76LX8 1427 aa13.87□□□□□ -0.19
RAB5B-205ENST00000549034 HOXD11P31277 338 aaPredicted RBP13.86□□□□□ -0.19
RAB5B-205ENST00000549034 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
RAB5B-205ENST00000549034 L3MBTL2Q969R5 705 aa13.85□□□□□ -0.19
RAB5B-205ENST00000549034 RBM33Q96EV2 1170 aaKnown RBP13.85□□□□□ -0.19
RAB5B-205ENST00000549034 LTBP4Q8N2S1 1624 aa13.85□□□□□ -0.19
RAB5B-205ENST00000549034 TMEM132EQ6IEE7 984 aa13.84□□□□□ -0.19
RAB5B-205ENST00000549034 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
RAB5B-205ENST00000549034 METP08581 1390 aa13.83□□□□□ -0.19
RAB5B-205ENST00000549034 STRCP1A6NGW2 1772 aa13.83□□□□□ -0.19
RAB5B-205ENST00000549034 CHD2O14647 1828 aaKnown RBP13.83□□□□□ -0.2
RAB5B-205ENST00000549034 C14orf93Q9H972 538 aaKnown RBP13.83□□□□□ -0.2
RAB5B-205ENST00000549034 STK26Q9P289 416 aa13.83□□□□□ -0.2
RAB5B-205ENST00000549034 SETBP1Q9Y6X0 1596 aa13.82□□□□□ -0.2
RAB5B-205ENST00000549034 ALKQ9UM73 1620 aa13.82□□□□□ -0.2
RAB5B-205ENST00000549034 NRXN3Q9Y4C0 1643 aa13.82□□□□□ -0.2
RAB5B-205ENST00000549034 PIK3R4Q99570 1358 aa13.82□□□□□ -0.2
RAB5B-205ENST00000549034 CPS1P31327 1500 aa13.81□□□□□ -0.2
RAB5B-205ENST00000549034 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
RAB5B-205ENST00000549034 C14orf37Q86TY3 774 aa13.8□□□□□ -0.2
RAB5B-205ENST00000549034 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
RAB5B-205ENST00000549034 TONSLQ96HA7 1378 aa13.79□□□□□ -0.2
RAB5B-205ENST00000549034 MYOM2P54296 1465 aa13.79□□□□□ -0.2
RAB5B-205ENST00000549034 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
RAB5B-205ENST00000549034 PIK3C2GO75747 1445 aa13.78□□□□□ -0.2
RAB5B-205ENST00000549034 UBAP1LF5GYI3 381 aa13.77□□□□□ -0.21
RAB5B-205ENST00000549034 TMEM94Q12767 1356 aa13.77□□□□□ -0.21
RAB5B-205ENST00000549034 CLSPNQ9HAW4 1339 aa13.77□□□□□ -0.21
RAB5B-205ENST00000549034 NRXN1Q9ULB1 1477 aa13.76□□□□□ -0.21
RAB5B-205ENST00000549034 TOM1O60784 492 aa13.76□□□□□ -0.21
RAB5B-205ENST00000549034 FBXO41Q8TF61 875 aa13.76□□□□□ -0.21
RAB5B-205ENST00000549034 WAPLQ7Z5K2 1190 aa13.75□□□□□ -0.21
RAB5B-205ENST00000549034 SETD1AO15047 1707 aaKnown RBP13.74□□□□□ -0.21
RAB5B-205ENST00000549034 NBPF1Q3BBV0 1214 aa13.74□□□□□ -0.21
RAB5B-205ENST00000549034 TRAK1Q9UPV9 953 aa13.74□□□□□ -0.21
RAB5B-205ENST00000549034 LRPPRCP42704 1394 aaKnown RBP13.73□□□□□ -0.21
RAB5B-205ENST00000549034 PIP4K2BP78356 416 aa13.73□□□□□ -0.21
RAB5B-205ENST00000549034 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
RAB5B-205ENST00000549034 C19orf44Q9H6X5 657 aa13.73□□□□□ -0.21
RAB5B-205ENST00000549034 NWD1Q149M9 1564 aa13.73□□□□□ -0.21
RAB5B-205ENST00000549034 XIRP1Q702N8 1843 aaKnown RBP13.73□□□□□ -0.21
RAB5B-205ENST00000549034 NKTRP30414 1462 aaKnown RBP13.73□□□□□ -0.21
RAB5B-205ENST00000549034 IQSEC2Q5JU85 1478 aa13.73□□□□□ -0.21
RAB5B-205ENST00000549034 POGKQ9P215 609 aa13.72□□□□□ -0.21
RAB5B-205ENST00000549034 YTHDC2Q9H6S0 1430 aaKnown RBP13.72□□□□□ -0.21
RAB5B-205ENST00000549034 MSH6P52701 1360 aa13.71□□□□□ -0.21
RAB5B-205ENST00000549034 ABCC11Q96J66 1382 aa13.71□□□□□ -0.21
RAB5B-205ENST00000549034 ROBO2Q9HCK4 1378 aa13.71□□□□□ -0.21
RAB5B-205ENST00000549034 ATF3P18847 181 aa13.71□□□□□ -0.21
RAB5B-205ENST00000549034 SIRT1Q96EB6 747 aa13.71□□□□□ -0.21
RAB5B-205ENST00000549034 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
RAB5B-205ENST00000549034 PRAG1Q86YV5 1406 aa13.71□□□□□ -0.22
RAB5B-205ENST00000549034 SAFB2Q14151 953 aaKnown RBP eCLIP13.7□□□□□ -0.22
RAB5B-205ENST00000549034 ILDR1Q86SU0 546 aaPredicted RBP13.7□□□□□ -0.22
RAB5B-205ENST00000549034 LAMC1P11047 1609 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms