RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 NEUROD1Q13562 356 aa30.62■■■□□ 2.49
CACNB3-210ENST00000548874 SCAF11Q99590 1463 aaKnown RBP30.62■■■□□ 2.49
CACNB3-210ENST00000548874 IFT172Q9UG01 1749 aa30.61■■■□□ 2.49
CACNB3-210ENST00000548874 LTKP29376 864 aa30.61■■■□□ 2.49
CACNB3-210ENST00000548874 ANKLE2Q86XL3 938 aa30.61■■■□□ 2.49
CACNB3-210ENST00000548874 PPLO60437 1756 aa30.61■■■□□ 2.49
CACNB3-210ENST00000548874 POLR1AO95602 1720 aaPredicted RBP30.6■■■□□ 2.49
CACNB3-210ENST00000548874 STRCQ7RTU9 1775 aa30.59■■■□□ 2.49
CACNB3-210ENST00000548874 TXNDC2Q86VQ3 553 aa30.59■■■□□ 2.49
CACNB3-210ENST00000548874 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.59■■■□□ 2.49
CACNB3-210ENST00000548874 EID1Q9Y6B2 187 aa30.59■■■□□ 2.49
CACNB3-210ENST00000548874 HDGFP51858 240 aaKnown RBP30.58■■■□□ 2.49
CACNB3-210ENST00000548874 MED14O60244 1454 aa30.57■■■□□ 2.48
CACNB3-210ENST00000548874 NCKAP5LQ9HCH0 1330 aa30.56■■■□□ 2.48
CACNB3-210ENST00000548874 MYOM2P54296 1465 aa30.53■■■□□ 2.48
CACNB3-210ENST00000548874 NUTM2DQ5VT03 806 aaPredicted RBP30.53■■■□□ 2.48
CACNB3-210ENST00000548874 PLEKHG1Q9ULL1 1385 aa30.52■■■□□ 2.48
CACNB3-210ENST00000548874 VGFO15240 615 aaPredicted RBP30.51■■■□□ 2.47
CACNB3-210ENST00000548874 L3MBTL2Q969R5 705 aa30.51■■■□□ 2.47
CACNB3-210ENST00000548874 NPHP4O75161 1426 aaPredicted RBP30.5■■■□□ 2.47
CACNB3-210ENST00000548874 PPP1R15AO75807 674 aaPredicted RBP30.5■■■□□ 2.47
CACNB3-210ENST00000548874 DCAF11Q8TEB1 546 aa30.49■■■□□ 2.47
CACNB3-210ENST00000548874 STAC3Q96MF2 364 aa30.49■■■□□ 2.47
CACNB3-210ENST00000548874 TONSLQ96HA7 1378 aa30.49■■■□□ 2.47
CACNB3-210ENST00000548874 NRXN1Q9ULB1 1477 aa30.49■■■□□ 2.47
CACNB3-210ENST00000548874 IQGAP1P46940 1657 aa30.47■■■□□ 2.47
CACNB3-210ENST00000548874 ADGRF5Q8IZF2 1346 aa30.47■■■□□ 2.47
CACNB3-210ENST00000548874 SETBP1Q9Y6X0 1596 aa30.45■■■□□ 2.47
CACNB3-210ENST00000548874 NRXN3Q9Y4C0 1643 aa30.44■■■□□ 2.46
CACNB3-210ENST00000548874 TIMELESSQ9UNS1 1208 aa30.44■■■□□ 2.46
CACNB3-210ENST00000548874 PIK3C2GO75747 1445 aa30.43■■■□□ 2.46
CACNB3-210ENST00000548874 KDM2AQ9Y2K7 1162 aa30.42■■■□□ 2.46
CACNB3-210ENST00000548874 ADAMTS13Q76LX8 1427 aa30.41■■■□□ 2.46
CACNB3-210ENST00000548874 DMRT2Q9Y5R5 561 aa30.4■■■□□ 2.46
CACNB3-210ENST00000548874 DIP2AQ14689 1571 aa30.37■■■□□ 2.45
CACNB3-210ENST00000548874 PRAG1Q86YV5 1406 aa30.37■■■□□ 2.45
CACNB3-210ENST00000548874 SENP3Q9H4L4 574 aaPredicted RBP30.35■■■□□ 2.45
CACNB3-210ENST00000548874 ALKQ9UM73 1620 aa30.34■■■□□ 2.45
CACNB3-210ENST00000548874 BCANQ96GW7 911 aa30.34■■■□□ 2.45
CACNB3-210ENST00000548874 TBX22Q9Y458 520 aa30.34■■■□□ 2.45
CACNB3-210ENST00000548874 SETD1AO15047 1707 aaKnown RBP30.33■■■□□ 2.45
CACNB3-210ENST00000548874 SLC26A8Q96RN1 970 aa30.33■■■□□ 2.45
CACNB3-210ENST00000548874 LAMC1P11047 1609 aa30.31■■■□□ 2.44
CACNB3-210ENST00000548874 C14orf93Q9H972 538 aaKnown RBP30.3■■■□□ 2.44
CACNB3-210ENST00000548874 CFAP70Q5T0N1 1121 aa30.27■■■□□ 2.44
CACNB3-210ENST00000548874 NBPF8Q3BBV2 869 aa30.26■■■□□ 2.43
CACNB3-210ENST00000548874 KIAA1210Q9ULL0 1709 aa30.26■■■□□ 2.43
CACNB3-210ENST00000548874 PIK3R4Q99570 1358 aa30.26■■■□□ 2.43
CACNB3-210ENST00000548874 ASXL1Q8IXJ9 1541 aa30.25■■■□□ 2.43
CACNB3-210ENST00000548874 METP08581 1390 aa30.25■■■□□ 2.43
CACNB3-210ENST00000548874 TRPM1Q7Z4N2 1603 aa30.22■■■□□ 2.43
CACNB3-210ENST00000548874 ADGRB1O14514 1584 aa30.21■■■□□ 2.43
CACNB3-210ENST00000548874 PTPRUQ92729 1446 aa30.2■■■□□ 2.42
CACNB3-210ENST00000548874 NWD1Q149M9 1564 aa30.2■■■□□ 2.42
CACNB3-210ENST00000548874 CHD2O14647 1828 aaKnown RBP30.19■■■□□ 2.42
CACNB3-210ENST00000548874 RALGAPBQ86X10 1494 aa30.16■■■□□ 2.42
CACNB3-210ENST00000548874 ZNF335Q9H4Z2 1342 aaPredicted RBP30.16■■■□□ 2.42
CACNB3-210ENST00000548874 XRN1Q8IZH2 1706 aaKnown RBP30.16■■■□□ 2.42
CACNB3-210ENST00000548874 KCNA6P17658 529 aa30.15■■■□□ 2.42
CACNB3-210ENST00000548874 TMEM132EQ6IEE7 984 aa30.15■■■□□ 2.42
CACNB3-210ENST00000548874 STRCP1A6NGW2 1772 aa30.14■■■□□ 2.42
CACNB3-210ENST00000548874 NBPF1Q3BBV0 1214 aa30.14■■■□□ 2.42
CACNB3-210ENST00000548874 LRPPRCP42704 1394 aaKnown RBP30.13■■■□□ 2.41
CACNB3-210ENST00000548874 YTHDC2Q9H6S0 1430 aaKnown RBP30.13■■■□□ 2.41
CACNB3-210ENST00000548874 GPRASP1Q5JY77 1395 aa30.12■■■□□ 2.41
CACNB3-210ENST00000548874 AMOTL2Q9Y2J4 779 aa30.11■■■□□ 2.41
CACNB3-210ENST00000548874 TECPR2O15040 1411 aa30.1■■■□□ 2.41
CACNB3-210ENST00000548874 NKTRP30414 1462 aaKnown RBP30.1■■■□□ 2.41
CACNB3-210ENST00000548874 LTBP4Q8N2S1 1624 aa30.1■■■□□ 2.41
CACNB3-210ENST00000548874 ROCK2O75116 1388 aaKnown RBP30.09■■■□□ 2.41
CACNB3-210ENST00000548874 ABCC11Q96J66 1382 aa30.09■■■□□ 2.41
CACNB3-210ENST00000548874 KNDC1Q76NI1 1749 aa30.08■■■□□ 2.41
CACNB3-210ENST00000548874 CPS1P31327 1500 aa30.06■■■□□ 2.4
CACNB3-210ENST00000548874 PTCH1Q13635 1447 aa30.06■■■□□ 2.4
CACNB3-210ENST00000548874 DLC1Q96QB1 1528 aa30.04■■■□□ 2.4
CACNB3-210ENST00000548874 STK26Q9P289 416 aa30.03■■■□□ 2.4
CACNB3-210ENST00000548874 ROBO2Q9HCK4 1378 aa30.03■■■□□ 2.4
CACNB3-210ENST00000548874 SIRT1Q96EB6 747 aa30■■■□□ 2.39
CACNB3-210ENST00000548874 LRRC7Q96NW7 1537 aa30■■■□□ 2.39
CACNB3-210ENST00000548874 FAM135BQ49AJ0 1406 aa29.99■■■□□ 2.39
CACNB3-210ENST00000548874 CARD11Q9BXL7 1154 aa29.98■■■□□ 2.39
CACNB3-210ENST00000548874 TRAK1Q9UPV9 953 aa29.98■■■□□ 2.39
CACNB3-210ENST00000548874 ARHGEF28Q8N1W1 1705 aaKnown RBP29.97■■■□□ 2.39
CACNB3-210ENST00000548874 ZEB1P37275 1124 aaPredicted RBP29.97■■■□□ 2.39
CACNB3-210ENST00000548874 PROSER2Q86WR7 435 aaPredicted RBP29.95■■■□□ 2.39
CACNB3-210ENST00000548874 TMEM94Q12767 1356 aa29.93■■■□□ 2.38
CACNB3-210ENST00000548874 NCOA3Q9Y6Q9 1424 aa29.93■■■□□ 2.38
CACNB3-210ENST00000548874 PLEKHH1Q9ULM0 1364 aa29.92■■■□□ 2.38
CACNB3-210ENST00000548874 XIRP1Q702N8 1843 aaKnown RBP29.92■■■□□ 2.38
CACNB3-210ENST00000548874 WAPLQ7Z5K2 1190 aa29.9■■■□□ 2.38
CACNB3-210ENST00000548874 PRAM1Q96QH2 718 aa29.9■■■□□ 2.38
CACNB3-210ENST00000548874 RBM33Q96EV2 1170 aaKnown RBP29.88■■■□□ 2.37
CACNB3-210ENST00000548874 EIF3AQ14152 1382 aaKnown RBP29.88■■■□□ 2.37
CACNB3-210ENST00000548874 POGKQ9P215 609 aa29.85■■■□□ 2.37
CACNB3-210ENST00000548874 USP47Q96K76 1375 aa29.85■■■□□ 2.37
CACNB3-210ENST00000548874 ADGRL3Q9HAR2 1447 aa29.85■■■□□ 2.37
CACNB3-210ENST00000548874 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.85■■■□□ 2.37
CACNB3-210ENST00000548874 CENPJQ9HC77 1338 aaPredicted RBP29.84■■■□□ 2.37
CACNB3-210ENST00000548874 NALCNQ8IZF0 1738 aa29.84■■■□□ 2.37
CACNB3-210ENST00000548874 IQSEC2Q5JU85 1478 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms