RNA–Protein interactions for RNA: ENST00000548560.1

SP1-203, Transcript of Sp1 transcription factor, humanhuman

TSL 2

Gene SP1, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-203ENST00000548560 MYO5BQ9ULV0 1848 aa13□□□□□ -0.33
SP1-203ENST00000548560 NOS1P29475 1434 aa13□□□□□ -0.33
SP1-203ENST00000548560 SETD5Q9C0A6 1442 aa12.99□□□□□ -0.33
SP1-203ENST00000548560 ADGRB3O60242 1522 aa12.98□□□□□ -0.33
SP1-203ENST00000548560 ACIN1Q9UKV3 1341 aaKnown RBP12.98□□□□□ -0.33
SP1-203ENST00000548560 THEMISQ8N1K5 641 aaPredicted RBP12.98□□□□□ -0.33
SP1-203ENST00000548560 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
SP1-203ENST00000548560 U3KPZ7 1027 aaPredicted RBP12.98□□□□□ -0.33
SP1-203ENST00000548560 KIF1BO60333 1816 aa12.97□□□□□ -0.33
SP1-203ENST00000548560 PKD2Q13563 968 aa12.96□□□□□ -0.33
SP1-203ENST00000548560 SLC52A1Q9NWF4 448 aa12.96□□□□□ -0.33
SP1-203ENST00000548560 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
SP1-203ENST00000548560 NEURL4Q96JN8 1562 aa12.94□□□□□ -0.34
SP1-203ENST00000548560 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
SP1-203ENST00000548560 SLIT1O75093 1534 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 TRPM2O94759 1503 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 NCKAP5LQ9HCH0 1330 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 IQSEC2Q5JU85 1478 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 TMEM131LA2VDJ0 1609 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 IDI1Q13907 227 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 ANKLE2Q86XL3 938 aa12.93□□□□□ -0.34
SP1-203ENST00000548560 CLTCL1P53675 1640 aa12.92□□□□□ -0.34
SP1-203ENST00000548560 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
SP1-203ENST00000548560 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
SP1-203ENST00000548560 CHGAP10645 457 aaKnown RBP12.9□□□□□ -0.34
SP1-203ENST00000548560 EID1Q9Y6B2 187 aa12.9□□□□□ -0.34
SP1-203ENST00000548560 NPHP4O75161 1426 aaPredicted RBP12.89□□□□□ -0.35
SP1-203ENST00000548560 TMEM2Q9UHN6 1383 aa12.89□□□□□ -0.35
SP1-203ENST00000548560 MED14O60244 1454 aa12.89□□□□□ -0.35
SP1-203ENST00000548560 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
SP1-203ENST00000548560 MPHOSPH9Q99550 1183 aa12.87□□□□□ -0.35
SP1-203ENST00000548560 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
SP1-203ENST00000548560 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
SP1-203ENST00000548560 CCDC144AA2RUR9 1427 aa12.85□□□□□ -0.35
SP1-203ENST00000548560 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
SP1-203ENST00000548560 HRCP23327 699 aa12.84□□□□□ -0.35
SP1-203ENST00000548560 ZNF335Q9H4Z2 1342 aaPredicted RBP12.84□□□□□ -0.35
SP1-203ENST00000548560 ZFYVE9O95405 1425 aa12.83□□□□□ -0.36
SP1-203ENST00000548560 ZNF326Q5BKZ1 582 aaKnown RBP12.83□□□□□ -0.36
SP1-203ENST00000548560 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.83□□□□□ -0.36
SP1-203ENST00000548560 STRCP1A6NGW2 1772 aa12.82□□□□□ -0.36
SP1-203ENST00000548560 PPLO60437 1756 aa12.82□□□□□ -0.36
SP1-203ENST00000548560 LTKP29376 864 aa12.82□□□□□ -0.36
SP1-203ENST00000548560 TRIM26Q12899 539 aaPredicted RBP12.82□□□□□ -0.36
SP1-203ENST00000548560 BCANQ96GW7 911 aa12.82□□□□□ -0.36
SP1-203ENST00000548560 ILDR2Q71H61 639 aa12.81□□□□□ -0.36
SP1-203ENST00000548560 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
SP1-203ENST00000548560 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
SP1-203ENST00000548560 CPS1P31327 1500 aa12.8□□□□□ -0.36
SP1-203ENST00000548560 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
SP1-203ENST00000548560 DIP2AQ14689 1571 aa12.8□□□□□ -0.36
SP1-203ENST00000548560 PLEKHG1Q9ULL1 1385 aa12.8□□□□□ -0.36
SP1-203ENST00000548560 IFT172Q9UG01 1749 aa12.79□□□□□ -0.36
SP1-203ENST00000548560 DISP3Q9P2K9 1392 aa12.77□□□□□ -0.37
SP1-203ENST00000548560 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
SP1-203ENST00000548560 NUTM2DQ5VT03 806 aaPredicted RBP12.76□□□□□ -0.37
SP1-203ENST00000548560 SETBP1Q9Y6X0 1596 aa12.76□□□□□ -0.37
SP1-203ENST00000548560 NRXN3Q9Y4C0 1643 aa12.76□□□□□ -0.37
SP1-203ENST00000548560 NWD1Q149M9 1564 aa12.75□□□□□ -0.37
SP1-203ENST00000548560 XIRP1Q702N8 1843 aaKnown RBP12.75□□□□□ -0.37
SP1-203ENST00000548560 RPGRIP1LQ68CZ1 1315 aa12.74□□□□□ -0.37
SP1-203ENST00000548560 SLC26A8Q96RN1 970 aa12.74□□□□□ -0.37
SP1-203ENST00000548560 SPATA31E1Q6ZUB1 1445 aa12.73□□□□□ -0.37
SP1-203ENST00000548560 ANKRD30BQ9BXX2 1392 aa12.73□□□□□ -0.37
SP1-203ENST00000548560 NKTRP30414 1462 aaKnown RBP12.72□□□□□ -0.37
SP1-203ENST00000548560 VGFO15240 615 aaPredicted RBP12.72□□□□□ -0.37
SP1-203ENST00000548560 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
SP1-203ENST00000548560 ADAMTS13Q76LX8 1427 aa12.71□□□□□ -0.37
SP1-203ENST00000548560 SETD1AO15047 1707 aaKnown RBP12.71□□□□□ -0.37
SP1-203ENST00000548560 TBX22Q9Y458 520 aa12.7□□□□□ -0.38
SP1-203ENST00000548560 LRRC7Q96NW7 1537 aa12.7□□□□□ -0.38
SP1-203ENST00000548560 LAMC1P11047 1609 aa12.7□□□□□ -0.38
SP1-203ENST00000548560 PIK3R4Q99570 1358 aa12.69□□□□□ -0.38
SP1-203ENST00000548560 UBAP1LF5GYI3 381 aa12.69□□□□□ -0.38
SP1-203ENST00000548560 KCNA6P17658 529 aa12.69□□□□□ -0.38
SP1-203ENST00000548560 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
SP1-203ENST00000548560 MYOM2P54296 1465 aa12.68□□□□□ -0.38
SP1-203ENST00000548560 SOCS7O14512 581 aa12.68□□□□□ -0.38
SP1-203ENST00000548560 MED1Q15648 1581 aaPredicted RBP12.68□□□□□ -0.38
SP1-203ENST00000548560 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
SP1-203ENST00000548560 DHX57Q6P158 1386 aaKnown RBP12.65□□□□□ -0.38
SP1-203ENST00000548560 PIK3C2GO75747 1445 aa12.64□□□□□ -0.39
SP1-203ENST00000548560 PROSER2Q86WR7 435 aaPredicted RBP12.64□□□□□ -0.39
SP1-203ENST00000548560 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
SP1-203ENST00000548560 KNDC1Q76NI1 1749 aa12.63□□□□□ -0.39
SP1-203ENST00000548560 METP08581 1390 aa12.63□□□□□ -0.39
SP1-203ENST00000548560 TMEM94Q12767 1356 aa12.63□□□□□ -0.39
SP1-203ENST00000548560 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 NRXN1Q9ULB1 1477 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 TOM1O60784 492 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 HSPA1LP34931 641 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 PCGF6Q9BYE7 350 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 AMOTL2Q9Y2J4 779 aa12.62□□□□□ -0.39
SP1-203ENST00000548560 MSH6P52701 1360 aa12.61□□□□□ -0.39
SP1-203ENST00000548560 C14orf37Q86TY3 774 aa12.61□□□□□ -0.39
SP1-203ENST00000548560 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.6□□□□□ -0.39
SP1-203ENST00000548560 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
SP1-203ENST00000548560 STAC3Q96MF2 364 aa12.6□□□□□ -0.39
SP1-203ENST00000548560 PTCH1Q13635 1447 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms