RNA–Protein interactions for RNA: ENST00000548401.1

LETMD1-216, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-216ENST00000548401 IQGAP1P46940 1657 aa25.19■■□□□ 1.62
LETMD1-216ENST00000548401 CLSPNQ9HAW4 1339 aa25.18■■□□□ 1.62
LETMD1-216ENST00000548401 LTKP29376 864 aa25.17■■□□□ 1.62
LETMD1-216ENST00000548401 SIN3AQ96ST3 1273 aa25.17■■□□□ 1.62
LETMD1-216ENST00000548401 MYOM2P54296 1465 aa25.16■■□□□ 1.62
LETMD1-216ENST00000548401 NRXN3Q9Y4C0 1643 aa25.16■■□□□ 1.62
LETMD1-216ENST00000548401 RPGRIP1LQ68CZ1 1315 aa25.14■■□□□ 1.62
LETMD1-216ENST00000548401 NCKAP5LQ9HCH0 1330 aa25.14■■□□□ 1.62
LETMD1-216ENST00000548401 SETBP1Q9Y6X0 1596 aa25.14■■□□□ 1.62
LETMD1-216ENST00000548401 ZNF326Q5BKZ1 582 aaKnown RBP25.14■■□□□ 1.62
LETMD1-216ENST00000548401 ANKLE2Q86XL3 938 aa25.14■■□□□ 1.62
LETMD1-216ENST00000548401 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
LETMD1-216ENST00000548401 PLEKHG1Q9ULL1 1385 aa25.13■■□□□ 1.61
LETMD1-216ENST00000548401 RGL3Q3MIN7 710 aa25.12■■□□□ 1.61
LETMD1-216ENST00000548401 TXNDC2Q86VQ3 553 aa25.12■■□□□ 1.61
LETMD1-216ENST00000548401 NRXN1Q9ULB1 1477 aa25.12■■□□□ 1.61
LETMD1-216ENST00000548401 CCER1Q8TC90 406 aaPredicted RBP25.11■■□□□ 1.61
LETMD1-216ENST00000548401 EID1Q9Y6B2 187 aa25.11■■□□□ 1.61
LETMD1-216ENST00000548401 SETD1AO15047 1707 aaKnown RBP25.1■■□□□ 1.61
LETMD1-216ENST00000548401 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.1■■□□□ 1.61
LETMD1-216ENST00000548401 DIP2AQ14689 1571 aa25.09■■□□□ 1.61
LETMD1-216ENST00000548401 PIK3C2GO75747 1445 aa25.07■■□□□ 1.6
LETMD1-216ENST00000548401 ADAMTS13Q76LX8 1427 aa25.07■■□□□ 1.6
LETMD1-216ENST00000548401 NUTM2DQ5VT03 806 aaPredicted RBP25.07■■□□□ 1.6
LETMD1-216ENST00000548401 NEUROD1Q13562 356 aa25.06■■□□□ 1.6
LETMD1-216ENST00000548401 PPP1R15AO75807 674 aaPredicted RBP25.05■■□□□ 1.6
LETMD1-216ENST00000548401 HDGFP51858 240 aaKnown RBP25.04■■□□□ 1.6
LETMD1-216ENST00000548401 ADGRF5Q8IZF2 1346 aa25.04■■□□□ 1.6
LETMD1-216ENST00000548401 LAMC1P11047 1609 aa25.03■■□□□ 1.6
LETMD1-216ENST00000548401 VGFO15240 615 aaPredicted RBP25.02■■□□□ 1.6
LETMD1-216ENST00000548401 ALKQ9UM73 1620 aa25.01■■□□□ 1.59
LETMD1-216ENST00000548401 L3MBTL2Q969R5 705 aa25■■□□□ 1.59
LETMD1-216ENST00000548401 TONSLQ96HA7 1378 aa25■■□□□ 1.59
LETMD1-216ENST00000548401 ASXL1Q8IXJ9 1541 aa25■■□□□ 1.59
LETMD1-216ENST00000548401 PRAG1Q86YV5 1406 aa24.99■■□□□ 1.59
LETMD1-216ENST00000548401 DCAF11Q8TEB1 546 aa24.98■■□□□ 1.59
LETMD1-216ENST00000548401 NWD1Q149M9 1564 aa24.97■■□□□ 1.59
LETMD1-216ENST00000548401 KIAA1210Q9ULL0 1709 aa24.96■■□□□ 1.59
LETMD1-216ENST00000548401 STAC3Q96MF2 364 aa24.96■■□□□ 1.59
LETMD1-216ENST00000548401 DMRT2Q9Y5R5 561 aa24.96■■□□□ 1.59
LETMD1-216ENST00000548401 STRCP1A6NGW2 1772 aa24.95■■□□□ 1.58
LETMD1-216ENST00000548401 SENP3Q9H4L4 574 aaPredicted RBP24.94■■□□□ 1.58
LETMD1-216ENST00000548401 XRN1Q8IZH2 1706 aaKnown RBP24.94■■□□□ 1.58
LETMD1-216ENST00000548401 SLC26A8Q96RN1 970 aa24.93■■□□□ 1.58
LETMD1-216ENST00000548401 TRPM1Q7Z4N2 1603 aa24.93■■□□□ 1.58
LETMD1-216ENST00000548401 CHD2O14647 1828 aaKnown RBP24.93■■□□□ 1.58
LETMD1-216ENST00000548401 KDM2AQ9Y2K7 1162 aa24.92■■□□□ 1.58
LETMD1-216ENST00000548401 ADGRB1O14514 1584 aa24.92■■□□□ 1.58
LETMD1-216ENST00000548401 TBX22Q9Y458 520 aa24.91■■□□□ 1.58
LETMD1-216ENST00000548401 METP08581 1390 aa24.91■■□□□ 1.58
LETMD1-216ENST00000548401 PIK3R4Q99570 1358 aa24.9■■□□□ 1.58
LETMD1-216ENST00000548401 LTBP4Q8N2S1 1624 aa24.89■■□□□ 1.57
LETMD1-216ENST00000548401 PTPRUQ92729 1446 aa24.88■■□□□ 1.57
LETMD1-216ENST00000548401 BCANQ96GW7 911 aa24.88■■□□□ 1.57
LETMD1-216ENST00000548401 KNDC1Q76NI1 1749 aa24.87■■□□□ 1.57
LETMD1-216ENST00000548401 TIMELESSQ9UNS1 1208 aa24.87■■□□□ 1.57
LETMD1-216ENST00000548401 C14orf93Q9H972 538 aaKnown RBP24.86■■□□□ 1.57
LETMD1-216ENST00000548401 ZNF335Q9H4Z2 1342 aaPredicted RBP24.86■■□□□ 1.57
LETMD1-216ENST00000548401 NKTRP30414 1462 aaKnown RBP24.85■■□□□ 1.57
LETMD1-216ENST00000548401 CFAP70Q5T0N1 1121 aa24.84■■□□□ 1.57
LETMD1-216ENST00000548401 RALGAPBQ86X10 1494 aa24.83■■□□□ 1.57
LETMD1-216ENST00000548401 CPS1P31327 1500 aa24.82■■□□□ 1.56
LETMD1-216ENST00000548401 NBPF8Q3BBV2 869 aa24.82■■□□□ 1.56
LETMD1-216ENST00000548401 TECPR2O15040 1411 aa24.8■■□□□ 1.56
LETMD1-216ENST00000548401 PTCH1Q13635 1447 aa24.78■■□□□ 1.56
LETMD1-216ENST00000548401 YTHDC2Q9H6S0 1430 aaKnown RBP24.78■■□□□ 1.56
LETMD1-216ENST00000548401 LRPPRCP42704 1394 aaKnown RBP24.78■■□□□ 1.56
LETMD1-216ENST00000548401 KCNA6P17658 529 aa24.77■■□□□ 1.56
LETMD1-216ENST00000548401 XIRP1Q702N8 1843 aaKnown RBP24.77■■□□□ 1.56
LETMD1-216ENST00000548401 ARHGEF28Q8N1W1 1705 aaKnown RBP24.76■■□□□ 1.55
LETMD1-216ENST00000548401 GPRASP1Q5JY77 1395 aa24.76■■□□□ 1.55
LETMD1-216ENST00000548401 DLC1Q96QB1 1528 aa24.76■■□□□ 1.55
LETMD1-216ENST00000548401 TMEM132EQ6IEE7 984 aa24.75■■□□□ 1.55
LETMD1-216ENST00000548401 LRRC7Q96NW7 1537 aa24.75■■□□□ 1.55
LETMD1-216ENST00000548401 ABCC11Q96J66 1382 aa24.73■■□□□ 1.55
LETMD1-216ENST00000548401 NBPF1Q3BBV0 1214 aa24.73■■□□□ 1.55
LETMD1-216ENST00000548401 ROBO2Q9HCK4 1378 aa24.72■■□□□ 1.55
LETMD1-216ENST00000548401 AMOTL2Q9Y2J4 779 aa24.72■■□□□ 1.55
LETMD1-216ENST00000548401 ROCK2O75116 1388 aaKnown RBP24.7■■□□□ 1.55
LETMD1-216ENST00000548401 NALCNQ8IZF0 1738 aa24.69■■□□□ 1.54
LETMD1-216ENST00000548401 FAM135BQ49AJ0 1406 aa24.68■■□□□ 1.54
LETMD1-216ENST00000548401 TMEM94Q12767 1356 aa24.65■■□□□ 1.54
LETMD1-216ENST00000548401 IQSEC2Q5JU85 1478 aa24.64■■□□□ 1.54
LETMD1-216ENST00000548401 STK26Q9P289 416 aa24.64■■□□□ 1.54
LETMD1-216ENST00000548401 PLEKHH1Q9ULM0 1364 aa24.64■■□□□ 1.53
LETMD1-216ENST00000548401 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
LETMD1-216ENST00000548401 NCOA3Q9Y6Q9 1424 aa24.62■■□□□ 1.53
LETMD1-216ENST00000548401 ADGRB2O60241 1585 aa24.61■■□□□ 1.53
LETMD1-216ENST00000548401 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
LETMD1-216ENST00000548401 QRICH2Q9H0J4 1663 aa24.6■■□□□ 1.53
LETMD1-216ENST00000548401 SIRT1Q96EB6 747 aa24.6■■□□□ 1.53
LETMD1-216ENST00000548401 TRAK1Q9UPV9 953 aa24.6■■□□□ 1.53
LETMD1-216ENST00000548401 PROSER2Q86WR7 435 aaPredicted RBP24.59■■□□□ 1.53
LETMD1-216ENST00000548401 RBM33Q96EV2 1170 aaKnown RBP24.58■■□□□ 1.53
LETMD1-216ENST00000548401 CDC42BPGQ6DT37 1551 aa24.58■■□□□ 1.52
LETMD1-216ENST00000548401 CARD11Q9BXL7 1154 aa24.57■■□□□ 1.52
LETMD1-216ENST00000548401 DCCP43146 1447 aa24.55■■□□□ 1.52
LETMD1-216ENST00000548401 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
LETMD1-216ENST00000548401 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
LETMD1-216ENST00000548401 EIF3AQ14152 1382 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms