RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 ZFYVE9O95405 1425 aa23.58■■□□□ 1.36
SNX29P1-201ENST00000548357 SLC26A8Q96RN1 970 aa23.57■■□□□ 1.36
SNX29P1-201ENST00000548357 RBM33Q96EV2 1170 aaKnown RBP23.55■■□□□ 1.36
SNX29P1-201ENST00000548357 ROBO1Q9Y6N7 1651 aa23.54■■□□□ 1.36
SNX29P1-201ENST00000548357 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
SNX29P1-201ENST00000548357 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
SNX29P1-201ENST00000548357 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
SNX29P1-201ENST00000548357 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
SNX29P1-201ENST00000548357 SPHKAPQ2M3C7 1700 aa23.49■■□□□ 1.35
SNX29P1-201ENST00000548357 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
SNX29P1-201ENST00000548357 KCNA6P17658 529 aa23.48■■□□□ 1.35
SNX29P1-201ENST00000548357 ITGAEP38570 1179 aa23.48■■□□□ 1.35
SNX29P1-201ENST00000548357 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
SNX29P1-201ENST00000548357 NUTM2DQ5VT03 806 aaPredicted RBP23.44■■□□□ 1.34
SNX29P1-201ENST00000548357 PROSER2Q86WR7 435 aaPredicted RBP23.43■■□□□ 1.34
SNX29P1-201ENST00000548357 ADAMTS13Q76LX8 1427 aa23.42■■□□□ 1.34
SNX29P1-201ENST00000548357 NRXN3Q9Y4C0 1643 aa23.42■■□□□ 1.34
SNX29P1-201ENST00000548357 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
SNX29P1-201ENST00000548357 NUP155O75694 1391 aa23.4■■□□□ 1.34
SNX29P1-201ENST00000548357 PHLPP1O60346 1717 aa23.4■■□□□ 1.34
SNX29P1-201ENST00000548357 CHGAP10645 457 aaKnown RBP23.4■■□□□ 1.34
SNX29P1-201ENST00000548357 BCANQ96GW7 911 aa23.4■■□□□ 1.34
SNX29P1-201ENST00000548357 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.38■■□□□ 1.33
SNX29P1-201ENST00000548357 DIP2AQ14689 1571 aa23.37■■□□□ 1.33
SNX29P1-201ENST00000548357 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
SNX29P1-201ENST00000548357 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
SNX29P1-201ENST00000548357 PHF23Q9BUL5 403 aaPredicted RBP23.35■■□□□ 1.33
SNX29P1-201ENST00000548357 RGS17Q9UGC6 210 aaPredicted RBP23.35■■□□□ 1.33
SNX29P1-201ENST00000548357 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
SNX29P1-201ENST00000548357 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.32
SNX29P1-201ENST00000548357 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.32
SNX29P1-201ENST00000548357 MSH6P52701 1360 aa23.32■■□□□ 1.32
SNX29P1-201ENST00000548357 COL16A1Q07092 1604 aaPredicted RBP23.32■■□□□ 1.32
SNX29P1-201ENST00000548357 TRPM2O94759 1503 aa23.31■■□□□ 1.32
SNX29P1-201ENST00000548357 KIF1BO60333 1816 aa23.31■■□□□ 1.32
SNX29P1-201ENST00000548357 TBX22Q9Y458 520 aa23.3■■□□□ 1.32
SNX29P1-201ENST00000548357 SETBP1Q9Y6X0 1596 aa23.29■■□□□ 1.32
SNX29P1-201ENST00000548357 NAIPQ13075 1403 aa23.27■■□□□ 1.32
SNX29P1-201ENST00000548357 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.27■■□□□ 1.32
SNX29P1-201ENST00000548357 NEXMIFQ5QGS0 1516 aa23.27■■□□□ 1.32
SNX29P1-201ENST00000548357 SLAIN2Q9P270 581 aa23.25■■□□□ 1.31
SNX29P1-201ENST00000548357 SETD1AO15047 1707 aaKnown RBP23.25■■□□□ 1.31
SNX29P1-201ENST00000548357 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
SNX29P1-201ENST00000548357 PIK3R4Q99570 1358 aa23.22■■□□□ 1.31
SNX29P1-201ENST00000548357 NALCNQ8IZF0 1738 aa23.22■■□□□ 1.31
SNX29P1-201ENST00000548357 AHDC1Q5TGY3 1603 aaPredicted RBP23.21■■□□□ 1.31
SNX29P1-201ENST00000548357 NCOA3Q9Y6Q9 1424 aa23.2■■□□□ 1.3
SNX29P1-201ENST00000548357 METP08581 1390 aa23.19■■□□□ 1.3
SNX29P1-201ENST00000548357 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
SNX29P1-201ENST00000548357 SHPRHQ149N8 1683 aa23.19■■□□□ 1.3
SNX29P1-201ENST00000548357 LRP6O75581 1613 aa23.19■■□□□ 1.3
SNX29P1-201ENST00000548357 POTEAQ6S8J7 498 aa23.18■■□□□ 1.3
SNX29P1-201ENST00000548357 PPLO60437 1756 aa23.17■■□□□ 1.3
SNX29P1-201ENST00000548357 C14orf37Q86TY3 774 aa23.16■■□□□ 1.3
SNX29P1-201ENST00000548357 NHSL1Q5SYE7 1610 aa23.15■■□□□ 1.3
SNX29P1-201ENST00000548357 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
SNX29P1-201ENST00000548357 HFM1A2PYH4 1435 aa23.14■■□□□ 1.29
SNX29P1-201ENST00000548357 JCADQ9P266 1359 aa23.14■■□□□ 1.29
SNX29P1-201ENST00000548357 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
SNX29P1-201ENST00000548357 ASXL1Q8IXJ9 1541 aa23.11■■□□□ 1.29
SNX29P1-201ENST00000548357 MST1RQ04912 1400 aa23.1■■□□□ 1.29
SNX29P1-201ENST00000548357 ATF3P18847 181 aa23.08■■□□□ 1.29
SNX29P1-201ENST00000548357 BRINP3Q76B58 766 aa23.08■■□□□ 1.29
SNX29P1-201ENST00000548357 CADPS2Q86UW7 1296 aa23.08■■□□□ 1.29
SNX29P1-201ENST00000548357 DCCP43146 1447 aa23.08■■□□□ 1.28
SNX29P1-201ENST00000548357 IFT172Q9UG01 1749 aa23.07■■□□□ 1.28
SNX29P1-201ENST00000548357 TRIM52Q96A61 297 aa23.05■■□□□ 1.28
SNX29P1-201ENST00000548357 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
SNX29P1-201ENST00000548357 FOXD1Q16676 465 aa23.03■■□□□ 1.28
SNX29P1-201ENST00000548357 DDX17Q92841 729 aaKnown RBP23.01■■□□□ 1.27
SNX29P1-201ENST00000548357 ROBO2Q9HCK4 1378 aa23■■□□□ 1.27
SNX29P1-201ENST00000548357 SLC4A1APQ9BWU0 796 aaKnown RBP22.99■■□□□ 1.27
SNX29P1-201ENST00000548357 LAMC1P11047 1609 aa22.98■■□□□ 1.27
SNX29P1-201ENST00000548357 SPATA31A6Q5VVP1 1343 aa22.98■■□□□ 1.27
SNX29P1-201ENST00000548357 PTCH1Q13635 1447 aa22.98■■□□□ 1.27
SNX29P1-201ENST00000548357 SETD5Q9C0A6 1442 aa22.96■■□□□ 1.27
SNX29P1-201ENST00000548357 C1orf167Q5SNV9 1468 aa22.94■■□□□ 1.26
SNX29P1-201ENST00000548357 PRAG1Q86YV5 1406 aa22.94■■□□□ 1.26
SNX29P1-201ENST00000548357 NUTM2BA6NNL0 878 aaPredicted RBP22.92■■□□□ 1.26
SNX29P1-201ENST00000548357 NUTM2EB1AL46 878 aaPredicted RBP22.92■■□□□ 1.26
SNX29P1-201ENST00000548357 NUTM2AQ8IVF1 878 aaPredicted RBP22.92■■□□□ 1.26
SNX29P1-201ENST00000548357 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
SNX29P1-201ENST00000548357 MEX3CQ5U5Q3 659 aaKnown RBP22.91■■□□□ 1.26
SNX29P1-201ENST00000548357 KNDC1Q76NI1 1749 aa22.91■■□□□ 1.26
SNX29P1-201ENST00000548357 VGFO15240 615 aaPredicted RBP22.9■■□□□ 1.26
SNX29P1-201ENST00000548357 PNPLA6Q8IY17 1366 aa22.89■■□□□ 1.26
SNX29P1-201ENST00000548357 ADGRF5Q8IZF2 1346 aa22.89■■□□□ 1.26
SNX29P1-201ENST00000548357 RPGRIP1LQ68CZ1 1315 aa22.88■■□□□ 1.25
SNX29P1-201ENST00000548357 CDC42BPGQ6DT37 1551 aa22.86■■□□□ 1.25
SNX29P1-201ENST00000548357 CCDC144AA2RUR9 1427 aa22.86■■□□□ 1.25
SNX29P1-201ENST00000548357 ORAI2Q96SN7 254 aa22.86■■□□□ 1.25
SNX29P1-201ENST00000548357 RGPD8O14715 1765 aaPredicted RBP22.85■■□□□ 1.25
SNX29P1-201ENST00000548357 RGL3Q3MIN7 710 aa22.83■■□□□ 1.25
SNX29P1-201ENST00000548357 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.25
SNX29P1-201ENST00000548357 AFF2P51816 1311 aa22.82■■□□□ 1.24
SNX29P1-201ENST00000548357 COL22A1Q8NFW1 1626 aaPredicted RBP22.82■■□□□ 1.24
SNX29P1-201ENST00000548357 ZNF772Q68DY9 489 aaPredicted RBP22.82■■□□□ 1.24
SNX29P1-201ENST00000548357 FMN2Q9NZ56 1722 aa22.82■■□□□ 1.24
SNX29P1-201ENST00000548357 MARF1Q9Y4F3 1742 aaKnown RBP22.82■■□□□ 1.24
SNX29P1-201ENST00000548357 LRRC59Q96AG4 307 aaKnown RBP22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms