RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 ANKRD50Q9ULJ7 1429 aa31.15■■■□□ 2.58
GATC-202ENST00000548171 RGS17Q9UGC6 210 aaPredicted RBP31.15■■■□□ 2.58
GATC-202ENST00000548171 GCC2Q8IWJ2 1684 aa31.13■■■□□ 2.57
GATC-202ENST00000548171 CHD2O14647 1828 aaKnown RBP31.12■■■□□ 2.57
GATC-202ENST00000548171 BCANQ96GW7 911 aa31.11■■■□□ 2.57
GATC-202ENST00000548171 ZFYVE9O95405 1425 aa31.1■■■□□ 2.57
GATC-202ENST00000548171 MSH6P52701 1360 aa31.1■■■□□ 2.57
GATC-202ENST00000548171 FAM50AQ14320 339 aaKnown RBP31.1■■■□□ 2.57
GATC-202ENST00000548171 HDGFP51858 240 aaKnown RBP31.09■■■□□ 2.57
GATC-202ENST00000548171 PLEKHG1Q9ULL1 1385 aa31.08■■■□□ 2.57
GATC-202ENST00000548171 TMEM131LA2VDJ0 1609 aa31.08■■■□□ 2.57
GATC-202ENST00000548171 RBM33Q96EV2 1170 aaKnown RBP31.07■■■□□ 2.56
GATC-202ENST00000548171 UNC13BO14795 1591 aa31.05■■■□□ 2.56
GATC-202ENST00000548171 RIMS2Q9UQ26 1411 aa31.04■■■□□ 2.56
GATC-202ENST00000548171 PHLPP1O60346 1717 aa31.04■■■□□ 2.56
GATC-202ENST00000548171 PPP1R15AO75807 674 aaPredicted RBP31.03■■■□□ 2.56
GATC-202ENST00000548171 SLAIN2Q9P270 581 aa31.01■■■□□ 2.55
GATC-202ENST00000548171 E9PCH4 1651 aa30.99■■■□□ 2.55
GATC-202ENST00000548171 NCOA3Q9Y6Q9 1424 aa30.98■■■□□ 2.55
GATC-202ENST00000548171 TBX22Q9Y458 520 aa30.98■■■□□ 2.55
GATC-202ENST00000548171 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.97■■■□□ 2.55
GATC-202ENST00000548171 DIP2AQ14689 1571 aa30.96■■■□□ 2.55
GATC-202ENST00000548171 POTEAQ6S8J7 498 aa30.95■■■□□ 2.55
GATC-202ENST00000548171 IQGAP3Q86VI3 1631 aa30.95■■■□□ 2.54
GATC-202ENST00000548171 JCADQ9P266 1359 aa30.93■■■□□ 2.54
GATC-202ENST00000548171 ROCK1Q13464 1354 aa30.92■■■□□ 2.54
GATC-202ENST00000548171 COL16A1Q07092 1604 aaPredicted RBP30.91■■■□□ 2.54
GATC-202ENST00000548171 PIK3R4Q99570 1358 aa30.91■■■□□ 2.54
GATC-202ENST00000548171 ADAMTS13Q76LX8 1427 aa30.9■■■□□ 2.54
GATC-202ENST00000548171 CHGAP10645 457 aaKnown RBP30.89■■■□□ 2.54
GATC-202ENST00000548171 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.87■■■□□ 2.53
GATC-202ENST00000548171 C14orf37Q86TY3 774 aa30.86■■■□□ 2.53
GATC-202ENST00000548171 TRPM2O94759 1503 aa30.84■■■□□ 2.53
GATC-202ENST00000548171 CADPS2Q86UW7 1296 aa30.84■■■□□ 2.53
GATC-202ENST00000548171 C19orf44Q9H6X5 657 aa30.83■■■□□ 2.53
GATC-202ENST00000548171 AHDC1Q5TGY3 1603 aaPredicted RBP30.81■■■□□ 2.52
GATC-202ENST00000548171 SPATA31A6Q5VVP1 1343 aa30.8■■■□□ 2.52
GATC-202ENST00000548171 ATF3P18847 181 aa30.8■■■□□ 2.52
GATC-202ENST00000548171 NUTM2DQ5VT03 806 aaPredicted RBP30.79■■■□□ 2.52
GATC-202ENST00000548171 NUP155O75694 1391 aa30.79■■■□□ 2.52
GATC-202ENST00000548171 SHPRHQ149N8 1683 aa30.78■■■□□ 2.52
GATC-202ENST00000548171 SETD1AO15047 1707 aaKnown RBP30.77■■■□□ 2.52
GATC-202ENST00000548171 SPHKAPQ2M3C7 1700 aa30.74■■■□□ 2.51
GATC-202ENST00000548171 AMOTL2Q9Y2J4 779 aa30.73■■■□□ 2.51
GATC-202ENST00000548171 LRP6O75581 1613 aa30.73■■■□□ 2.51
GATC-202ENST00000548171 DCCP43146 1447 aa30.72■■■□□ 2.51
GATC-202ENST00000548171 SETBP1Q9Y6X0 1596 aa30.71■■■□□ 2.51
GATC-202ENST00000548171 XRN1Q8IZH2 1706 aaKnown RBP30.71■■■□□ 2.51
GATC-202ENST00000548171 NRXN3Q9Y4C0 1643 aa30.7■■■□□ 2.51
GATC-202ENST00000548171 PTPRUQ92729 1446 aa30.7■■■□□ 2.5
GATC-202ENST00000548171 MEX3CQ5U5Q3 659 aaKnown RBP30.69■■■□□ 2.5
GATC-202ENST00000548171 ZNF772Q68DY9 489 aaPredicted RBP30.69■■■□□ 2.5
GATC-202ENST00000548171 BRINP3Q76B58 766 aa30.64■■■□□ 2.5
GATC-202ENST00000548171 ITGAEP38570 1179 aa30.63■■■□□ 2.49
GATC-202ENST00000548171 ASXL1Q8IXJ9 1541 aa30.62■■■□□ 2.49
GATC-202ENST00000548171 NHSL1Q5SYE7 1610 aa30.61■■■□□ 2.49
GATC-202ENST00000548171 ZNF326Q5BKZ1 582 aaKnown RBP30.59■■■□□ 2.49
GATC-202ENST00000548171 MST1RQ04912 1400 aa30.57■■■□□ 2.48
GATC-202ENST00000548171 KIF1BO60333 1816 aa30.57■■■□□ 2.48
GATC-202ENST00000548171 SETD5Q9C0A6 1442 aa30.56■■■□□ 2.48
GATC-202ENST00000548171 METP08581 1390 aa30.55■■■□□ 2.48
GATC-202ENST00000548171 CLTCL1P53675 1640 aa30.54■■■□□ 2.48
GATC-202ENST00000548171 NEXMIFQ5QGS0 1516 aa30.53■■■□□ 2.48
GATC-202ENST00000548171 ADGRL3Q9HAR2 1447 aa30.53■■■□□ 2.48
GATC-202ENST00000548171 NALCNQ8IZF0 1738 aa30.52■■■□□ 2.48
GATC-202ENST00000548171 CDK12Q9NYV4 1490 aaPredicted RBP30.51■■■□□ 2.48
GATC-202ENST00000548171 RXRBP28702 533 aa30.51■■■□□ 2.47
GATC-202ENST00000548171 TRIM52Q96A61 297 aa30.51■■■□□ 2.47
GATC-202ENST00000548171 NUTM2BA6NNL0 878 aaPredicted RBP30.5■■■□□ 2.47
GATC-202ENST00000548171 NUTM2EB1AL46 878 aaPredicted RBP30.5■■■□□ 2.47
GATC-202ENST00000548171 NUTM2AQ8IVF1 878 aaPredicted RBP30.5■■■□□ 2.47
GATC-202ENST00000548171 LRRC59Q96AG4 307 aaKnown RBP30.5■■■□□ 2.47
GATC-202ENST00000548171 UPF1Q92900 1129 aaKnown RBP eCLIP30.48■■■□□ 2.47
GATC-202ENST00000548171 AFF2P51816 1311 aa30.44■■■□□ 2.46
GATC-202ENST00000548171 LAMC1P11047 1609 aa30.41■■■□□ 2.46
GATC-202ENST00000548171 PPARGC1BQ86YN6 1023 aaKnown RBP30.41■■■□□ 2.46
GATC-202ENST00000548171 PTCH1Q13635 1447 aa30.4■■■□□ 2.46
GATC-202ENST00000548171 PNPLA6Q8IY17 1366 aa30.4■■■□□ 2.46
GATC-202ENST00000548171 RRBP1Q9P2E9 1410 aaKnown RBP30.39■■■□□ 2.45
GATC-202ENST00000548171 NAIPQ13075 1403 aa30.38■■■□□ 2.45
GATC-202ENST00000548171 C1orf167Q5SNV9 1468 aa30.38■■■□□ 2.45
GATC-202ENST00000548171 VGFO15240 615 aaPredicted RBP30.37■■■□□ 2.45
GATC-202ENST00000548171 PRAG1Q86YV5 1406 aa30.35■■■□□ 2.45
GATC-202ENST00000548171 DDX17Q92841 729 aaKnown RBP30.34■■■□□ 2.45
GATC-202ENST00000548171 C8orf37Q96NL8 207 aa30.34■■■□□ 2.45
GATC-202ENST00000548171 RPGRIP1LQ68CZ1 1315 aa30.32■■■□□ 2.44
GATC-202ENST00000548171 PPLO60437 1756 aa30.32■■■□□ 2.44
GATC-202ENST00000548171 RBM6P78332 1123 aaKnown RBP30.31■■■□□ 2.44
GATC-202ENST00000548171 ROBO2Q9HCK4 1378 aa30.3■■■□□ 2.44
GATC-202ENST00000548171 QTRT2Q9H974 415 aaKnown RBP30.3■■■□□ 2.44
GATC-202ENST00000548171 RGS12O14924 1447 aa30.28■■■□□ 2.44
GATC-202ENST00000548171 SOS2Q07890 1332 aaPredicted RBP30.27■■■□□ 2.44
GATC-202ENST00000548171 HFM1A2PYH4 1435 aa30.27■■■□□ 2.44
GATC-202ENST00000548171 NGLY1Q96IV0 654 aa30.25■■■□□ 2.43
GATC-202ENST00000548171 ADAMTS2O95450 1211 aa30.23■■■□□ 2.43
GATC-202ENST00000548171 ORAI2Q96SN7 254 aa30.23■■■□□ 2.43
GATC-202ENST00000548171 COL22A1Q8NFW1 1626 aaPredicted RBP30.22■■■□□ 2.43
GATC-202ENST00000548171 SLC4A1APQ9BWU0 796 aaKnown RBP30.21■■■□□ 2.43
GATC-202ENST00000548171 CDC42BPGQ6DT37 1551 aa30.2■■■□□ 2.42
GATC-202ENST00000548171 USP21Q9UK80 565 aa30.15■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms