RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 RIMS2Q9UQ26 1411 aa24.69■■□□□ 1.54
KRT4-201ENST00000548097 TMEM2Q9UHN6 1383 aa24.69■■□□□ 1.54
KRT4-201ENST00000548097 PPLO60437 1756 aa24.69■■□□□ 1.54
KRT4-201ENST00000548097 IFT172Q9UG01 1749 aa24.68■■□□□ 1.54
KRT4-201ENST00000548097 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
KRT4-201ENST00000548097 LTKP29376 864 aa24.66■■□□□ 1.54
KRT4-201ENST00000548097 ZFYVE9O95405 1425 aa24.66■■□□□ 1.54
KRT4-201ENST00000548097 RPGRIP1LQ68CZ1 1315 aa24.65■■□□□ 1.54
KRT4-201ENST00000548097 TXNDC2Q86VQ3 553 aa24.63■■□□□ 1.53
KRT4-201ENST00000548097 TIMELESSQ9UNS1 1208 aa24.63■■□□□ 1.53
KRT4-201ENST00000548097 PPP1R15AO75807 674 aaPredicted RBP24.63■■□□□ 1.53
KRT4-201ENST00000548097 NBPF8Q3BBV2 869 aa24.63■■□□□ 1.53
KRT4-201ENST00000548097 SLIT1O75093 1534 aa24.63■■□□□ 1.53
KRT4-201ENST00000548097 ARHGAP23Q9P227 1491 aa24.62■■□□□ 1.53
KRT4-201ENST00000548097 AEBP2Q6ZN18 517 aaPredicted RBP24.61■■□□□ 1.53
KRT4-201ENST00000548097 VGFO15240 615 aaPredicted RBP24.59■■□□□ 1.53
KRT4-201ENST00000548097 EID1Q9Y6B2 187 aa24.59■■□□□ 1.53
KRT4-201ENST00000548097 NCKAP5LQ9HCH0 1330 aa24.59■■□□□ 1.53
KRT4-201ENST00000548097 MYOM2P54296 1465 aa24.58■■□□□ 1.53
KRT4-201ENST00000548097 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.57■■□□□ 1.52
KRT4-201ENST00000548097 PRAG1Q86YV5 1406 aa24.57■■□□□ 1.52
KRT4-201ENST00000548097 ANKLE2Q86XL3 938 aa24.56■■□□□ 1.52
KRT4-201ENST00000548097 BCANQ96GW7 911 aa24.56■■□□□ 1.52
KRT4-201ENST00000548097 SCAF11Q99590 1463 aaKnown RBP24.56■■□□□ 1.52
KRT4-201ENST00000548097 ZEB1P37275 1124 aaPredicted RBP24.56■■□□□ 1.52
KRT4-201ENST00000548097 HDGFP51858 240 aaKnown RBP24.56■■□□□ 1.52
KRT4-201ENST00000548097 NRXN1Q9ULB1 1477 aa24.54■■□□□ 1.52
KRT4-201ENST00000548097 CFAP70Q5T0N1 1121 aa24.53■■□□□ 1.52
KRT4-201ENST00000548097 PIK3C2GO75747 1445 aa24.53■■□□□ 1.52
KRT4-201ENST00000548097 POLR1AO95602 1720 aaPredicted RBP24.51■■□□□ 1.51
KRT4-201ENST00000548097 IQGAP1P46940 1657 aa24.51■■□□□ 1.51
KRT4-201ENST00000548097 NBPF1Q3BBV0 1214 aa24.5■■□□□ 1.51
KRT4-201ENST00000548097 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
KRT4-201ENST00000548097 SLC26A8Q96RN1 970 aa24.5■■□□□ 1.51
KRT4-201ENST00000548097 NRXN3Q9Y4C0 1643 aa24.5■■□□□ 1.51
KRT4-201ENST00000548097 PLEKHG1Q9ULL1 1385 aa24.49■■□□□ 1.51
KRT4-201ENST00000548097 STRCQ7RTU9 1775 aa24.47■■□□□ 1.51
KRT4-201ENST00000548097 TMEM132EQ6IEE7 984 aa24.47■■□□□ 1.51
KRT4-201ENST00000548097 TRPM1Q7Z4N2 1603 aa24.46■■□□□ 1.51
KRT4-201ENST00000548097 NPHP4O75161 1426 aaPredicted RBP24.45■■□□□ 1.51
KRT4-201ENST00000548097 ALKQ9UM73 1620 aa24.45■■□□□ 1.51
KRT4-201ENST00000548097 C14orf93Q9H972 538 aaKnown RBP24.45■■□□□ 1.5
KRT4-201ENST00000548097 ADAMTS13Q76LX8 1427 aa24.45■■□□□ 1.5
KRT4-201ENST00000548097 SETBP1Q9Y6X0 1596 aa24.44■■□□□ 1.5
KRT4-201ENST00000548097 ROCK2O75116 1388 aaKnown RBP24.42■■□□□ 1.5
KRT4-201ENST00000548097 MED14O60244 1454 aa24.42■■□□□ 1.5
KRT4-201ENST00000548097 RALGAPBQ86X10 1494 aa24.41■■□□□ 1.5
KRT4-201ENST00000548097 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
KRT4-201ENST00000548097 METP08581 1390 aa24.4■■□□□ 1.5
KRT4-201ENST00000548097 ASXL1Q8IXJ9 1541 aa24.4■■□□□ 1.5
KRT4-201ENST00000548097 KIAA1210Q9ULL0 1709 aa24.38■■□□□ 1.49
KRT4-201ENST00000548097 CARD11Q9BXL7 1154 aa24.38■■□□□ 1.49
KRT4-201ENST00000548097 STK26Q9P289 416 aa24.37■■□□□ 1.49
KRT4-201ENST00000548097 LAMC1P11047 1609 aa24.37■■□□□ 1.49
KRT4-201ENST00000548097 ADGRB1O14514 1584 aa24.36■■□□□ 1.49
KRT4-201ENST00000548097 TBX22Q9Y458 520 aa24.35■■□□□ 1.49
KRT4-201ENST00000548097 TRAK1Q9UPV9 953 aa24.33■■□□□ 1.48
KRT4-201ENST00000548097 PTPRUQ92729 1446 aa24.32■■□□□ 1.48
KRT4-201ENST00000548097 DIP2AQ14689 1571 aa24.31■■□□□ 1.48
KRT4-201ENST00000548097 GPRASP1Q5JY77 1395 aa24.31■■□□□ 1.48
KRT4-201ENST00000548097 HIRIP3Q9BW71 556 aaPredicted RBP24.31■■□□□ 1.48
KRT4-201ENST00000548097 YTHDC2Q9H6S0 1430 aaKnown RBP24.3■■□□□ 1.48
KRT4-201ENST00000548097 AMOTL2Q9Y2J4 779 aa24.28■■□□□ 1.48
KRT4-201ENST00000548097 USP47Q96K76 1375 aa24.25■■□□□ 1.47
KRT4-201ENST00000548097 KCNA6P17658 529 aa24.24■■□□□ 1.47
KRT4-201ENST00000548097 LRPPRCP42704 1394 aaKnown RBP24.24■■□□□ 1.47
KRT4-201ENST00000548097 SAFB2Q14151 953 aaKnown RBP eCLIP24.24■■□□□ 1.47
KRT4-201ENST00000548097 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
KRT4-201ENST00000548097 RBM33Q96EV2 1170 aaKnown RBP24.23■■□□□ 1.47
KRT4-201ENST00000548097 DMRT2Q9Y5R5 561 aa24.23■■□□□ 1.47
KRT4-201ENST00000548097 ZNF335Q9H4Z2 1342 aaPredicted RBP24.22■■□□□ 1.47
KRT4-201ENST00000548097 HSPA5P11021 654 aaKnown RBP24.22■■□□□ 1.47
KRT4-201ENST00000548097 WAPLQ7Z5K2 1190 aa24.22■■□□□ 1.47
KRT4-201ENST00000548097 STRCP1A6NGW2 1772 aa24.21■■□□□ 1.47
KRT4-201ENST00000548097 ARHGEF28Q8N1W1 1705 aaKnown RBP24.2■■□□□ 1.47
KRT4-201ENST00000548097 ABCC11Q96J66 1382 aa24.2■■□□□ 1.46
KRT4-201ENST00000548097 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
KRT4-201ENST00000548097 PLEKHH1Q9ULM0 1364 aa24.2■■□□□ 1.46
KRT4-201ENST00000548097 ST20-MTHFSA0A0A6YYL1 179 aa24.2■■□□□ 1.46
KRT4-201ENST00000548097 EIF4G2P78344 907 aaKnown RBP eCLIP24.2■■□□□ 1.46
KRT4-201ENST00000548097 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
KRT4-201ENST00000548097 PRAM1Q96QH2 718 aa24.19■■□□□ 1.46
KRT4-201ENST00000548097 XRN1Q8IZH2 1706 aaKnown RBP24.19■■□□□ 1.46
KRT4-201ENST00000548097 KNDC1Q76NI1 1749 aa24.17■■□□□ 1.46
KRT4-201ENST00000548097 POGKQ9P215 609 aa24.16■■□□□ 1.46
KRT4-201ENST00000548097 TECPR2O15040 1411 aa24.15■■□□□ 1.46
KRT4-201ENST00000548097 CPS1P31327 1500 aa24.15■■□□□ 1.46
KRT4-201ENST00000548097 NWD1Q149M9 1564 aa24.14■■□□□ 1.46
KRT4-201ENST00000548097 CENPJQ9HC77 1338 aaPredicted RBP24.13■■□□□ 1.45
KRT4-201ENST00000548097 EIF3AQ14152 1382 aaKnown RBP24.13■■□□□ 1.45
KRT4-201ENST00000548097 DLC1Q96QB1 1528 aa24.13■■□□□ 1.45
KRT4-201ENST00000548097 MINK1Q8N4C8 1332 aaPredicted RBP24.11■■□□□ 1.45
KRT4-201ENST00000548097 QRICH2Q9H0J4 1663 aa24.11■■□□□ 1.45
KRT4-201ENST00000548097 PTCH1Q13635 1447 aa24.1■■□□□ 1.45
KRT4-201ENST00000548097 PROSER2Q86WR7 435 aaPredicted RBP24.1■■□□□ 1.45
KRT4-201ENST00000548097 TESK2Q96S53 571 aa24.09■■□□□ 1.45
KRT4-201ENST00000548097 FAM135BQ49AJ0 1406 aa24.08■■□□□ 1.45
KRT4-201ENST00000548097 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.07■■□□□ 1.44
KRT4-201ENST00000548097 SIRT1Q96EB6 747 aa24.06■■□□□ 1.44
KRT4-201ENST00000548097 NKTRP30414 1462 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms