RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 APLP1P51693 650 aa8.8□□□□□ -1
TRAFD1-204ENST00000548092 KCNC4Q03721 635 aa8.8□□□□□ -1
TRAFD1-204ENST00000548092 TJAP1Q5JTD0 557 aa8.79□□□□□ -1
TRAFD1-204ENST00000548092 RCCD1A6NED2 376 aa8.78□□□□□ -1
TRAFD1-204ENST00000548092 HIC1Q14526 733 aa8.78□□□□□ -1
TRAFD1-204ENST00000548092 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
TRAFD1-204ENST00000548092 GNPATO15228 680 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 DNAJB2P25686 324 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 SLF2Q8IX21 1173 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 PXYLP1Q8TE99 480 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 ZNF516Q92618 1163 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 MTRQ99707 1265 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 TMEM134Q9H6X4 195 aa8.76□□□□□ -1.01
TRAFD1-204ENST00000548092 OATP04181 439 aa8.73□□□□□ -1.01
TRAFD1-204ENST00000548092 METTL3Q86U44 580 aaKnown RBP8.73□□□□□ -1.01
TRAFD1-204ENST00000548092 SLC10A3P09131 477 aa8.72□□□□□ -1.01
TRAFD1-204ENST00000548092 GPIHBP1Q8IV16 184 aa8.71□□□□□ -1.02
TRAFD1-204ENST00000548092 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.02
TRAFD1-204ENST00000548092 NLRP7Q8WX94 980 aa8.71□□□□□ -1.02
TRAFD1-204ENST00000548092 PHOX2BQ99453 314 aa8.71□□□□□ -1.02
TRAFD1-204ENST00000548092 IL21Q9HBE4 155 aa8.71□□□□□ -1.02
TRAFD1-204ENST00000548092 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.7□□□□□ -1.02
TRAFD1-204ENST00000548092 COPS2P61201 443 aa8.7□□□□□ -1.02
TRAFD1-204ENST00000548092 THOC2Q8NI27 1593 aaKnown RBP8.69□□□□□ -1.02
TRAFD1-204ENST00000548092 RGS20O76081 388 aa8.68□□□□□ -1.02
TRAFD1-204ENST00000548092 NECTIN2Q92692 538 aa8.68□□□□□ -1.02
TRAFD1-204ENST00000548092 SLC4A3P48751 1232 aa8.67□□□□□ -1.02
TRAFD1-204ENST00000548092 PPP1R18Q6NYC8 613 aa8.66□□□□□ -1.02
TRAFD1-204ENST00000548092 BLOC1S3Q6QNY0 202 aa8.66□□□□□ -1.02
TRAFD1-204ENST00000548092 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.02
TRAFD1-204ENST00000548092 ZPR1O75312 459 aa8.65□□□□□ -1.02
TRAFD1-204ENST00000548092 CFHP08603 1231 aa8.65□□□□□ -1.02
TRAFD1-204ENST00000548092 PCDHB3Q9Y5E6 796 aa8.65□□□□□ -1.02
TRAFD1-204ENST00000548092 ACTN4O43707 911 aaKnown RBP8.64□□□□□ -1.03
TRAFD1-204ENST00000548092 DAXXQ9UER7 740 aaPredicted RBP8.64□□□□□ -1.03
TRAFD1-204ENST00000548092 SCRIBQ14160 1630 aa8.63□□□□□ -1.03
TRAFD1-204ENST00000548092 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
TRAFD1-204ENST00000548092 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
TRAFD1-204ENST00000548092 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.61□□□□□ -1.03
TRAFD1-204ENST00000548092 DDX11L8A8MPP1 907 aa8.6□□□□□ -1.03
TRAFD1-204ENST00000548092 IRF6O14896 467 aa8.6□□□□□ -1.03
TRAFD1-204ENST00000548092 TLL1O43897 1013 aa8.6□□□□□ -1.03
TRAFD1-204ENST00000548092 PUS10Q3MIT2 529 aaKnown RBP8.6□□□□□ -1.03
TRAFD1-204ENST00000548092 TULP1O00294 542 aaPredicted RBP8.59□□□□□ -1.03
TRAFD1-204ENST00000548092 MAP2K5Q13163 448 aa8.59□□□□□ -1.03
TRAFD1-204ENST00000548092 BAZ1AQ9NRL2 1556 aaPredicted RBP8.59□□□□□ -1.03
TRAFD1-204ENST00000548092 SCUBE3Q8IX30 993 aa8.58□□□□□ -1.04
TRAFD1-204ENST00000548092 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
TRAFD1-204ENST00000548092 NESP48681 1621 aa8.58□□□□□ -1.04
TRAFD1-204ENST00000548092 LMOD2Q6P5Q4 547 aa8.57□□□□□ -1.04
TRAFD1-204ENST00000548092 IRX2Q9BZI1 471 aaPredicted RBP8.57□□□□□ -1.04
TRAFD1-204ENST00000548092 PRKD2Q9BZL6 878 aa8.57□□□□□ -1.04
TRAFD1-204ENST00000548092 RIMBP3CA6NJZ7 1639 aa8.57□□□□□ -1.04
TRAFD1-204ENST00000548092 RIMBP3BA6NNM3 1639 aa8.57□□□□□ -1.04
TRAFD1-204ENST00000548092 RIMBP3Q9UFD9 1639 aa8.57□□□□□ -1.04
TRAFD1-204ENST00000548092 MINK1Q8N4C8 1332 aaPredicted RBP8.56□□□□□ -1.04
TRAFD1-204ENST00000548092 PPEF1O14829 653 aaPredicted RBP8.55□□□□□ -1.04
TRAFD1-204ENST00000548092 GCGRP47871 477 aa8.55□□□□□ -1.04
TRAFD1-204ENST00000548092 RSPH4AQ5TD94 716 aa8.55□□□□□ -1.04
TRAFD1-204ENST00000548092 RNF223E7ERA6 249 aa8.54□□□□□ -1.04
TRAFD1-204ENST00000548092 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-204ENST00000548092 FUT2Q10981 343 aa8.54□□□□□ -1.04
TRAFD1-204ENST00000548092 CCDC102AQ96A19 550 aa8.54□□□□□ -1.04
TRAFD1-204ENST00000548092 EMID1Q96A84 441 aaPredicted RBP8.54□□□□□ -1.04
TRAFD1-204ENST00000548092 NR1I2O75469 434 aa8.53□□□□□ -1.04
TRAFD1-204ENST00000548092 MORN1Q5T089 497 aa8.53□□□□□ -1.04
TRAFD1-204ENST00000548092 TMUB1Q9BVT8 246 aa8.53□□□□□ -1.04
TRAFD1-204ENST00000548092 SMARCA2P51531 1590 aa8.52□□□□□ -1.04
TRAFD1-204ENST00000548092 S1PR4O95977 384 aa8.52□□□□□ -1.05
TRAFD1-204ENST00000548092 CD46P15529 392 aa8.51□□□□□ -1.05
TRAFD1-204ENST00000548092 ATP6V1AP38606 617 aa8.51□□□□□ -1.05
TRAFD1-204ENST00000548092 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
TRAFD1-204ENST00000548092 ZC3H15Q8WU90 426 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-204ENST00000548092 REPIN1Q9BWE0 567 aaKnown RBP8.51□□□□□ -1.05
TRAFD1-204ENST00000548092 SLC27A5Q9Y2P5 690 aa8.51□□□□□ -1.05
TRAFD1-204ENST00000548092 ZMYND10O75800 440 aa8.5□□□□□ -1.05
TRAFD1-204ENST00000548092 ADH1BP00325 375 aa8.5□□□□□ -1.05
TRAFD1-204ENST00000548092 GGCXP38435 758 aa8.5□□□□□ -1.05
TRAFD1-204ENST00000548092 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
TRAFD1-204ENST00000548092 THAP11Q96EK4 314 aa8.5□□□□□ -1.05
TRAFD1-204ENST00000548092 V9GY48 417 aaPredicted RBP8.5□□□□□ -1.05
TRAFD1-204ENST00000548092 SPSB2Q99619 263 aa8.49□□□□□ -1.05
TRAFD1-204ENST00000548092 SLC6A16Q9GZN6 736 aa8.48□□□□□ -1.05
TRAFD1-204ENST00000548092 NCAPD3P42695 1498 aa8.48□□□□□ -1.05
TRAFD1-204ENST00000548092 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
TRAFD1-204ENST00000548092 GFRA3O60609 400 aa8.47□□□□□ -1.05
TRAFD1-204ENST00000548092 PLA2G2CQ5R387 149 aa8.47□□□□□ -1.05
TRAFD1-204ENST00000548092 FAM160A2Q8N612 972 aaPredicted RBP8.47□□□□□ -1.05
TRAFD1-204ENST00000548092 KRI1Q8N9T8 703 aaKnown RBP8.47□□□□□ -1.05
TRAFD1-204ENST00000548092 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
TRAFD1-204ENST00000548092 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
TRAFD1-204ENST00000548092 HLA-CQ95604 372 aa8.46□□□□□ -1.06
TRAFD1-204ENST00000548092 SLC19A1P41440 591 aa8.45□□□□□ -1.06
TRAFD1-204ENST00000548092 BRICD5Q6PL45 260 aa8.45□□□□□ -1.06
TRAFD1-204ENST00000548092 RNF19BQ6ZMZ0 732 aa8.45□□□□□ -1.06
TRAFD1-204ENST00000548092 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
TRAFD1-204ENST00000548092 FAM217BQ9NTX9 383 aaPredicted RBP8.45□□□□□ -1.06
TRAFD1-204ENST00000548092 KIF21AQ7Z4S6 1674 aa8.44□□□□□ -1.06
TRAFD1-204ENST00000548092 LCE2BO14633 110 aa8.44□□□□□ -1.06
TRAFD1-204ENST00000548092 KDM4AO75164 1064 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms