RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 NLRP1Q9C000 1473 aa15.75■□□□□ 0.11
SCN8A-205ENST00000548086 ADGRF5Q8IZF2 1346 aa15.75■□□□□ 0.11
SCN8A-205ENST00000548086 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
SCN8A-205ENST00000548086 UHRF1BP1Q6BDS2 1440 aa15.73■□□□□ 0.11
SCN8A-205ENST00000548086 CEP170BQ9Y4F5 1589 aaPredicted RBP15.72■□□□□ 0.11
SCN8A-205ENST00000548086 MYOM2P54296 1465 aa15.71■□□□□ 0.11
SCN8A-205ENST00000548086 TRPM1Q7Z4N2 1603 aa15.7■□□□□ 0.1
SCN8A-205ENST00000548086 KDM5AP29375 1690 aaKnown RBP15.7■□□□□ 0.1
SCN8A-205ENST00000548086 RIMS2Q9UQ26 1411 aa15.7■□□□□ 0.1
SCN8A-205ENST00000548086 SETD1BQ9UPS6 1966 aaKnown RBP15.7■□□□□ 0.1
SCN8A-205ENST00000548086 RPGRIP1LQ68CZ1 1315 aa15.69■□□□□ 0.1
SCN8A-205ENST00000548086 ZFYVE9O95405 1425 aa15.69■□□□□ 0.1
SCN8A-205ENST00000548086 NBPF1Q3BBV0 1214 aa15.69■□□□□ 0.1
SCN8A-205ENST00000548086 ZNF142P52746 1687 aaPredicted RBP15.68■□□□□ 0.1
SCN8A-205ENST00000548086 TMEM2Q9UHN6 1383 aa15.68■□□□□ 0.1
SCN8A-205ENST00000548086 RALGAPBQ86X10 1494 aa15.68■□□□□ 0.1
SCN8A-205ENST00000548086 NRXN1Q9ULB1 1477 aa15.68■□□□□ 0.1
SCN8A-205ENST00000548086 CENPBP07199 599 aaPredicted RBP15.67■□□□□ 0.1
SCN8A-205ENST00000548086 PELP1Q8IZL8 1130 aaKnown RBP15.67■□□□□ 0.1
SCN8A-205ENST00000548086 HIRIP3Q9BW71 556 aaPredicted RBP15.67■□□□□ 0.1
SCN8A-205ENST00000548086 PIK3C2GO75747 1445 aa15.66■□□□□ 0.1
SCN8A-205ENST00000548086 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
SCN8A-205ENST00000548086 CFAP70Q5T0N1 1121 aa15.66■□□□□ 0.1
SCN8A-205ENST00000548086 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
SCN8A-205ENST00000548086 LTKP29376 864 aa15.65■□□□□ 0.1
SCN8A-205ENST00000548086 AEBP2Q6ZN18 517 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-205ENST00000548086 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
SCN8A-205ENST00000548086 STAC3Q96MF2 364 aa15.64■□□□□ 0.09
SCN8A-205ENST00000548086 SLIT1O75093 1534 aa15.63■□□□□ 0.09
SCN8A-205ENST00000548086 ARHGAP23Q9P227 1491 aa15.63■□□□□ 0.09
SCN8A-205ENST00000548086 TXNDC2Q86VQ3 553 aa15.62■□□□□ 0.09
SCN8A-205ENST00000548086 CARD11Q9BXL7 1154 aa15.62■□□□□ 0.09
SCN8A-205ENST00000548086 IQGAP1P46940 1657 aa15.61■□□□□ 0.09
SCN8A-205ENST00000548086 NRXN3Q9Y4C0 1643 aa15.61■□□□□ 0.09
SCN8A-205ENST00000548086 TMEM132EQ6IEE7 984 aa15.6■□□□□ 0.09
SCN8A-205ENST00000548086 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
SCN8A-205ENST00000548086 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.6■□□□□ 0.09
SCN8A-205ENST00000548086 C14orf93Q9H972 538 aaKnown RBP15.6■□□□□ 0.09
SCN8A-205ENST00000548086 HSPA5P11021 654 aaKnown RBP15.59■□□□□ 0.09
SCN8A-205ENST00000548086 GPRASP1Q5JY77 1395 aa15.59■□□□□ 0.09
SCN8A-205ENST00000548086 ALKQ9UM73 1620 aa15.59■□□□□ 0.09
SCN8A-205ENST00000548086 HSPA2P54652 639 aa15.58■□□□□ 0.09
SCN8A-205ENST00000548086 BCANQ96GW7 911 aa15.58■□□□□ 0.09
SCN8A-205ENST00000548086 EID1Q9Y6B2 187 aa15.58■□□□□ 0.09
SCN8A-205ENST00000548086 ASXL1Q8IXJ9 1541 aa15.58■□□□□ 0.09
SCN8A-205ENST00000548086 USP47Q96K76 1375 aa15.58■□□□□ 0.08
SCN8A-205ENST00000548086 SCAF11Q99590 1463 aaKnown RBP15.58■□□□□ 0.08
SCN8A-205ENST00000548086 ADGRB1O14514 1584 aa15.57■□□□□ 0.08
SCN8A-205ENST00000548086 SETD1AO15047 1707 aaKnown RBP15.57■□□□□ 0.08
SCN8A-205ENST00000548086 LAMC1P11047 1609 aa15.57■□□□□ 0.08
SCN8A-205ENST00000548086 HDGFP51858 240 aaKnown RBP15.56■□□□□ 0.08
SCN8A-205ENST00000548086 EIF4G2P78344 907 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCN8A-205ENST00000548086 LMTK3Q96Q04 1460 aa15.56■□□□□ 0.08
SCN8A-205ENST00000548086 SETBP1Q9Y6X0 1596 aa15.56■□□□□ 0.08
SCN8A-205ENST00000548086 PLEKHG1Q9ULL1 1385 aa15.55■□□□□ 0.08
SCN8A-205ENST00000548086 SLC26A8Q96RN1 970 aa15.55■□□□□ 0.08
SCN8A-205ENST00000548086 MIER1Q8N108 512 aa15.55■□□□□ 0.08
SCN8A-205ENST00000548086 ADAMTS13Q76LX8 1427 aa15.54■□□□□ 0.08
SCN8A-205ENST00000548086 ANKLE2Q86XL3 938 aa15.54■□□□□ 0.08
SCN8A-205ENST00000548086 GTF3C3Q9Y5Q9 886 aa15.54■□□□□ 0.08
SCN8A-205ENST00000548086 NCKAP5LQ9HCH0 1330 aa15.54■□□□□ 0.08
SCN8A-205ENST00000548086 METP08581 1390 aa15.53■□□□□ 0.08
SCN8A-205ENST00000548086 POLR1AO95602 1720 aaPredicted RBP15.53■□□□□ 0.08
SCN8A-205ENST00000548086 ST20-MTHFSA0A0A6YYL1 179 aa15.53■□□□□ 0.08
SCN8A-205ENST00000548086 STK26Q9P289 416 aa15.53■□□□□ 0.08
SCN8A-205ENST00000548086 TRAK1Q9UPV9 953 aa15.53■□□□□ 0.08
SCN8A-205ENST00000548086 YTHDC2Q9H6S0 1430 aaKnown RBP15.49■□□□□ 0.07
SCN8A-205ENST00000548086 MED14O60244 1454 aa15.49■□□□□ 0.07
SCN8A-205ENST00000548086 ARHGEF28Q8N1W1 1705 aaKnown RBP15.48■□□□□ 0.07
SCN8A-205ENST00000548086 C11orf95C9JLR9 678 aaPredicted RBP15.48■□□□□ 0.07
SCN8A-205ENST00000548086 NPHP4O75161 1426 aaPredicted RBP15.48■□□□□ 0.07
SCN8A-205ENST00000548086 PTPRUQ92729 1446 aa15.46■□□□□ 0.07
SCN8A-205ENST00000548086 SAFB2Q14151 953 aaKnown RBP eCLIP15.46■□□□□ 0.07
SCN8A-205ENST00000548086 STRCQ7RTU9 1775 aa15.46■□□□□ 0.06
SCN8A-205ENST00000548086 TESK2Q96S53 571 aa15.45■□□□□ 0.06
SCN8A-205ENST00000548086 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
SCN8A-205ENST00000548086 LRPPRCP42704 1394 aaKnown RBP15.44■□□□□ 0.06
SCN8A-205ENST00000548086 DIP2AQ14689 1571 aa15.44■□□□□ 0.06
SCN8A-205ENST00000548086 EIF3AQ14152 1382 aaKnown RBP15.44■□□□□ 0.06
SCN8A-205ENST00000548086 QRICH2Q9H0J4 1663 aa15.44■□□□□ 0.06
SCN8A-205ENST00000548086 PLEKHH1Q9ULM0 1364 aa15.43■□□□□ 0.06
SCN8A-205ENST00000548086 WASHC2AQ641Q2 1341 aa15.42■□□□□ 0.06
SCN8A-205ENST00000548086 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
SCN8A-205ENST00000548086 WAPLQ7Z5K2 1190 aa15.42■□□□□ 0.06
SCN8A-205ENST00000548086 PRAM1Q96QH2 718 aa15.42■□□□□ 0.06
SCN8A-205ENST00000548086 POLR3GLQ9BT43 218 aa15.42■□□□□ 0.06
SCN8A-205ENST00000548086 DISP3Q9P2K9 1392 aa15.41■□□□□ 0.06
SCN8A-205ENST00000548086 AMOTL2Q9Y2J4 779 aa15.41■□□□□ 0.06
SCN8A-205ENST00000548086 ABCC11Q96J66 1382 aa15.41■□□□□ 0.06
SCN8A-205ENST00000548086 ROBO2Q9HCK4 1378 aa15.41■□□□□ 0.06
SCN8A-205ENST00000548086 KNDC1Q76NI1 1749 aa15.41■□□□□ 0.06
SCN8A-205ENST00000548086 KIF7Q2M1P5 1343 aa15.4■□□□□ 0.06
SCN8A-205ENST00000548086 CPS1P31327 1500 aa15.39■□□□□ 0.05
SCN8A-205ENST00000548086 XRN1Q8IZH2 1706 aaKnown RBP15.39■□□□□ 0.05
SCN8A-205ENST00000548086 POGKQ9P215 609 aa15.39■□□□□ 0.05
SCN8A-205ENST00000548086 DLC1Q96QB1 1528 aa15.39■□□□□ 0.05
SCN8A-205ENST00000548086 CCDC7Q96M83 1385 aa15.38■□□□□ 0.05
SCN8A-205ENST00000548086 CHD2O14647 1828 aaKnown RBP15.38■□□□□ 0.05
SCN8A-205ENST00000548086 KCNA6P17658 529 aa15.38■□□□□ 0.05
SCN8A-205ENST00000548086 TECPR2O15040 1411 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms