RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 UHRF1BP1Q6BDS2 1440 aa21.29■■□□□ 1
LETMD1-212ENST00000547877 STAC3Q96MF2 364 aa21.28■■□□□ 1
LETMD1-212ENST00000547877 MYOM2P54296 1465 aa21.26■□□□□ 0.99
LETMD1-212ENST00000547877 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
LETMD1-212ENST00000547877 TMEM2Q9UHN6 1383 aa21.26■□□□□ 0.99
LETMD1-212ENST00000547877 NBPF8Q3BBV2 869 aa21.26■□□□□ 0.99
LETMD1-212ENST00000547877 THEMISQ8N1K5 641 aaPredicted RBP21.26■□□□□ 0.99
LETMD1-212ENST00000547877 ZFYVE9O95405 1425 aa21.25■□□□□ 0.99
LETMD1-212ENST00000547877 RIMS2Q9UQ26 1411 aa21.25■□□□□ 0.99
LETMD1-212ENST00000547877 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
LETMD1-212ENST00000547877 ADGRF5Q8IZF2 1346 aa21.24■□□□□ 0.99
LETMD1-212ENST00000547877 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
LETMD1-212ENST00000547877 VGFO15240 615 aaPredicted RBP21.24■□□□□ 0.99
LETMD1-212ENST00000547877 SLIT1O75093 1534 aa21.22■□□□□ 0.99
LETMD1-212ENST00000547877 NRXN1Q9ULB1 1477 aa21.22■□□□□ 0.99
LETMD1-212ENST00000547877 ARHGAP23Q9P227 1491 aa21.21■□□□□ 0.99
LETMD1-212ENST00000547877 HDGFP51858 240 aaKnown RBP21.2■□□□□ 0.98
LETMD1-212ENST00000547877 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.2■□□□□ 0.98
LETMD1-212ENST00000547877 PIK3C2GO75747 1445 aa21.19■□□□□ 0.98
LETMD1-212ENST00000547877 LTKP29376 864 aa21.17■□□□□ 0.98
LETMD1-212ENST00000547877 TXNDC2Q86VQ3 553 aa21.17■□□□□ 0.98
LETMD1-212ENST00000547877 EID1Q9Y6B2 187 aa21.17■□□□□ 0.98
LETMD1-212ENST00000547877 DIEXFQ68CQ4 756 aaKnown RBP21.16■□□□□ 0.98
LETMD1-212ENST00000547877 TRPM1Q7Z4N2 1603 aa21.16■□□□□ 0.98
LETMD1-212ENST00000547877 LMTK3Q96Q04 1460 aa21.16■□□□□ 0.98
LETMD1-212ENST00000547877 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
LETMD1-212ENST00000547877 RALGAPBQ86X10 1494 aa21.14■□□□□ 0.98
LETMD1-212ENST00000547877 SCAF11Q99590 1463 aaKnown RBP21.14■□□□□ 0.97
LETMD1-212ENST00000547877 CFAP70Q5T0N1 1121 aa21.12■□□□□ 0.97
LETMD1-212ENST00000547877 ANKLE2Q86XL3 938 aa21.12■□□□□ 0.97
LETMD1-212ENST00000547877 ROCK2O75116 1388 aaKnown RBP21.11■□□□□ 0.97
LETMD1-212ENST00000547877 NBPF1Q3BBV0 1214 aa21.11■□□□□ 0.97
LETMD1-212ENST00000547877 KIAA1210Q9ULL0 1709 aa21.11■□□□□ 0.97
LETMD1-212ENST00000547877 PLEKHG1Q9ULL1 1385 aa21.11■□□□□ 0.97
LETMD1-212ENST00000547877 C14orf93Q9H972 538 aaKnown RBP21.11■□□□□ 0.97
LETMD1-212ENST00000547877 HSPA2P54652 639 aa21.1■□□□□ 0.97
LETMD1-212ENST00000547877 SETBP1Q9Y6X0 1596 aa21.09■□□□□ 0.97
LETMD1-212ENST00000547877 NRXN3Q9Y4C0 1643 aa21.09■□□□□ 0.97
LETMD1-212ENST00000547877 BCANQ96GW7 911 aa21.08■□□□□ 0.97
LETMD1-212ENST00000547877 LAMC1P11047 1609 aa21.08■□□□□ 0.97
LETMD1-212ENST00000547877 IQGAP1P46940 1657 aa21.08■□□□□ 0.96
LETMD1-212ENST00000547877 ALKQ9UM73 1620 aa21.07■□□□□ 0.96
LETMD1-212ENST00000547877 GPRASP1Q5JY77 1395 aa21.07■□□□□ 0.96
LETMD1-212ENST00000547877 CARD11Q9BXL7 1154 aa21.07■□□□□ 0.96
LETMD1-212ENST00000547877 POLR1AO95602 1720 aaPredicted RBP21.06■□□□□ 0.96
LETMD1-212ENST00000547877 NCKAP5LQ9HCH0 1330 aa21.04■□□□□ 0.96
LETMD1-212ENST00000547877 ADAMTS13Q76LX8 1427 aa21.04■□□□□ 0.96
LETMD1-212ENST00000547877 ADGRB1O14514 1584 aa21.04■□□□□ 0.96
LETMD1-212ENST00000547877 TMEM132EQ6IEE7 984 aa21.04■□□□□ 0.96
LETMD1-212ENST00000547877 SETD1AO15047 1707 aaKnown RBP21.04■□□□□ 0.96
LETMD1-212ENST00000547877 MED14O60244 1454 aa21.02■□□□□ 0.96
LETMD1-212ENST00000547877 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.96
LETMD1-212ENST00000547877 ASXL1Q8IXJ9 1541 aa21.01■□□□□ 0.95
LETMD1-212ENST00000547877 NPHP4O75161 1426 aaPredicted RBP21.01■□□□□ 0.95
LETMD1-212ENST00000547877 METP08581 1390 aa20.99■□□□□ 0.95
LETMD1-212ENST00000547877 USP47Q96K76 1375 aa20.99■□□□□ 0.95
LETMD1-212ENST00000547877 EIF4G2P78344 907 aaKnown RBP eCLIP20.98■□□□□ 0.95
LETMD1-212ENST00000547877 DIP2AQ14689 1571 aa20.98■□□□□ 0.95
LETMD1-212ENST00000547877 TBX22Q9Y458 520 aa20.98■□□□□ 0.95
LETMD1-212ENST00000547877 STRCQ7RTU9 1775 aa20.97■□□□□ 0.95
LETMD1-212ENST00000547877 YTHDC2Q9H6S0 1430 aaKnown RBP20.95■□□□□ 0.94
LETMD1-212ENST00000547877 HSPA5P11021 654 aaKnown RBP20.95■□□□□ 0.94
LETMD1-212ENST00000547877 HIRIP3Q9BW71 556 aaPredicted RBP20.94■□□□□ 0.94
LETMD1-212ENST00000547877 TRAK1Q9UPV9 953 aa20.94■□□□□ 0.94
LETMD1-212ENST00000547877 STK26Q9P289 416 aa20.94■□□□□ 0.94
LETMD1-212ENST00000547877 AEBP2Q6ZN18 517 aaPredicted RBP20.92■□□□□ 0.94
LETMD1-212ENST00000547877 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
LETMD1-212ENST00000547877 ST20-MTHFSA0A0A6YYL1 179 aa20.91■□□□□ 0.94
LETMD1-212ENST00000547877 EIF3AQ14152 1382 aaKnown RBP20.91■□□□□ 0.94
LETMD1-212ENST00000547877 PIK3R4Q99570 1358 aa20.9■□□□□ 0.94
LETMD1-212ENST00000547877 PTPRUQ92729 1446 aa20.89■□□□□ 0.94
LETMD1-212ENST00000547877 ABCC11Q96J66 1382 aa20.89■□□□□ 0.93
LETMD1-212ENST00000547877 ARHGEF28Q8N1W1 1705 aaKnown RBP20.89■□□□□ 0.93
LETMD1-212ENST00000547877 TECPR2O15040 1411 aa20.87■□□□□ 0.93
LETMD1-212ENST00000547877 AMOTL2Q9Y2J4 779 aa20.87■□□□□ 0.93
LETMD1-212ENST00000547877 KNDC1Q76NI1 1749 aa20.86■□□□□ 0.93
LETMD1-212ENST00000547877 DLC1Q96QB1 1528 aa20.85■□□□□ 0.93
LETMD1-212ENST00000547877 CHD2O14647 1828 aaKnown RBP20.85■□□□□ 0.93
LETMD1-212ENST00000547877 CENPJQ9HC77 1338 aaPredicted RBP20.84■□□□□ 0.93
LETMD1-212ENST00000547877 PRAM1Q96QH2 718 aa20.84■□□□□ 0.93
LETMD1-212ENST00000547877 CPS1P31327 1500 aa20.84■□□□□ 0.93
LETMD1-212ENST00000547877 XRN1Q8IZH2 1706 aaKnown RBP20.84■□□□□ 0.93
LETMD1-212ENST00000547877 TESK2Q96S53 571 aa20.83■□□□□ 0.92
LETMD1-212ENST00000547877 ROBO2Q9HCK4 1378 aa20.83■□□□□ 0.92
LETMD1-212ENST00000547877 KCNA6P17658 529 aa20.82■□□□□ 0.92
LETMD1-212ENST00000547877 SAFB2Q14151 953 aaKnown RBP eCLIP20.82■□□□□ 0.92
LETMD1-212ENST00000547877 WAPLQ7Z5K2 1190 aa20.82■□□□□ 0.92
LETMD1-212ENST00000547877 POGKQ9P215 609 aa20.82■□□□□ 0.92
LETMD1-212ENST00000547877 DMRT2Q9Y5R5 561 aa20.82■□□□□ 0.92
LETMD1-212ENST00000547877 FAM135BQ49AJ0 1406 aa20.81■□□□□ 0.92
LETMD1-212ENST00000547877 QRICH2Q9H0J4 1663 aa20.81■□□□□ 0.92
LETMD1-212ENST00000547877 PTCH1Q13635 1447 aa20.8■□□□□ 0.92
LETMD1-212ENST00000547877 SIRT1Q96EB6 747 aa20.8■□□□□ 0.92
LETMD1-212ENST00000547877 PLEKHH1Q9ULM0 1364 aa20.8■□□□□ 0.92
LETMD1-212ENST00000547877 NWD1Q149M9 1564 aa20.79■□□□□ 0.92
LETMD1-212ENST00000547877 SBNO2Q9Y2G9 1366 aa20.78■□□□□ 0.92
LETMD1-212ENST00000547877 C11orf95C9JLR9 678 aaPredicted RBP20.77■□□□□ 0.91
LETMD1-212ENST00000547877 CENPBP07199 599 aaPredicted RBP20.76■□□□□ 0.91
LETMD1-212ENST00000547877 STRCP1A6NGW2 1772 aa20.75■□□□□ 0.91
LETMD1-212ENST00000547877 TMF1P82094 1093 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms