RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SYNMO15061 1565 aa20.86■□□□□ 0.93
BRF1-212ENST00000547562 POGZQ7Z3K3 1410 aa20.85■□□□□ 0.93
BRF1-212ENST00000547562 EIF3AQ14152 1382 aaKnown RBP20.85■□□□□ 0.93
BRF1-212ENST00000547562 CDCA8Q53HL2 280 aa20.85■□□□□ 0.93
BRF1-212ENST00000547562 ABCA6Q8N139 1617 aa20.85■□□□□ 0.93
BRF1-212ENST00000547562 ZMYM4Q5VZL5 1548 aa20.84■□□□□ 0.93
BRF1-212ENST00000547562 B4GALNT3Q6L9W6 998 aa20.84■□□□□ 0.93
BRF1-212ENST00000547562 MROH2AA6NES4 1674 aa20.84■□□□□ 0.93
BRF1-212ENST00000547562 INSRP06213 1382 aa20.84■□□□□ 0.93
BRF1-212ENST00000547562 MLH3Q9UHC1 1453 aa20.82■□□□□ 0.92
BRF1-212ENST00000547562 HECW2Q9P2P5 1572 aa20.82■□□□□ 0.92
BRF1-212ENST00000547562 MYOM1P52179 1685 aa20.82■□□□□ 0.92
BRF1-212ENST00000547562 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
BRF1-212ENST00000547562 KDM5AP29375 1690 aaKnown RBP20.8■□□□□ 0.92
BRF1-212ENST00000547562 BLMP54132 1417 aaPredicted RBP20.8■□□□□ 0.92
BRF1-212ENST00000547562 KNSTRNQ9Y448 316 aa20.79■□□□□ 0.92
BRF1-212ENST00000547562 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
BRF1-212ENST00000547562 ADGRB3O60242 1522 aa20.78■□□□□ 0.92
BRF1-212ENST00000547562 NRXN1Q9ULB1 1477 aa20.78■□□□□ 0.92
BRF1-212ENST00000547562 PDE3BQ13370 1112 aa20.78■□□□□ 0.92
BRF1-212ENST00000547562 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.92
BRF1-212ENST00000547562 CFAP65Q6ZU64 1925 aaKnown RBP20.77■□□□□ 0.92
BRF1-212ENST00000547562 AMER1Q5JTC6 1135 aaPredicted RBP20.76■□□□□ 0.91
BRF1-212ENST00000547562 ASXL1Q8IXJ9 1541 aa20.75■□□□□ 0.91
BRF1-212ENST00000547562 NPATQ14207 1427 aa20.75■□□□□ 0.91
BRF1-212ENST00000547562 SALL2Q9Y467 1007 aaPredicted RBP20.74■□□□□ 0.91
BRF1-212ENST00000547562 SLC24A1O60721 1099 aa20.74■□□□□ 0.91
BRF1-212ENST00000547562 MYO3AQ8NEV4 1616 aa20.73■□□□□ 0.91
BRF1-212ENST00000547562 NEO1Q92859 1461 aa20.73■□□□□ 0.91
BRF1-212ENST00000547562 PPLO60437 1756 aa20.73■□□□□ 0.91
BRF1-212ENST00000547562 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
BRF1-212ENST00000547562 PPP2R1AP30153 589 aa20.72■□□□□ 0.91
BRF1-212ENST00000547562 NPC1L1Q9UHC9 1359 aa20.72■□□□□ 0.91
BRF1-212ENST00000547562 SETBP1Q9Y6X0 1596 aa20.71■□□□□ 0.91
BRF1-212ENST00000547562 GGT6Q6P531 493 aa20.71■□□□□ 0.91
BRF1-212ENST00000547562 ABCC3O15438 1527 aa20.71■□□□□ 0.91
BRF1-212ENST00000547562 NOS1P29475 1434 aa20.71■□□□□ 0.91
BRF1-212ENST00000547562 RCAN3Q9UKA8 241 aa20.7■□□□□ 0.9
BRF1-212ENST00000547562 RRP1P56182 461 aaKnown RBP20.69■□□□□ 0.9
BRF1-212ENST00000547562 CAMSAP1Q5T5Y3 1602 aa20.68■□□□□ 0.9
BRF1-212ENST00000547562 CCDC136Q96JN2 1154 aa20.68■□□□□ 0.9
BRF1-212ENST00000547562 SBNO2Q9Y2G9 1366 aa20.67■□□□□ 0.9
BRF1-212ENST00000547562 PIK3C2GO75747 1445 aa20.67■□□□□ 0.9
BRF1-212ENST00000547562 ADAMTS8Q9UP79 889 aa20.67■□□□□ 0.9
BRF1-212ENST00000547562 CHGAP10645 457 aaKnown RBP20.66■□□□□ 0.9
BRF1-212ENST00000547562 CDCA7LQ96GN5 454 aa20.66■□□□□ 0.9
BRF1-212ENST00000547562 DIP2CQ9Y2E4 1556 aa20.66■□□□□ 0.9
BRF1-212ENST00000547562 FANCIQ9NVI1 1328 aa20.65■□□□□ 0.9
BRF1-212ENST00000547562 RAPGEF3O95398 923 aa20.65■□□□□ 0.9
BRF1-212ENST00000547562 SIGLEC1Q9BZZ2 1709 aa20.65■□□□□ 0.9
BRF1-212ENST00000547562 RICTORQ6R327 1708 aa20.64■□□□□ 0.9
BRF1-212ENST00000547562 ANP32EQ9BTT0 268 aa20.64■□□□□ 0.89
BRF1-212ENST00000547562 ZC3H13Q5T200 1668 aaKnown RBP20.63■□□□□ 0.89
BRF1-212ENST00000547562 WDR43Q15061 677 aaKnown RBP eCLIP20.63■□□□□ 0.89
BRF1-212ENST00000547562 PIK3C2BO00750 1634 aa20.62■□□□□ 0.89
BRF1-212ENST00000547562 RPGRIP1LQ68CZ1 1315 aa20.62■□□□□ 0.89
BRF1-212ENST00000547562 ADGRB1O14514 1584 aa20.62■□□□□ 0.89
BRF1-212ENST00000547562 CENPJQ9HC77 1338 aaPredicted RBP20.61■□□□□ 0.89
BRF1-212ENST00000547562 C14orf93Q9H972 538 aaKnown RBP20.61■□□□□ 0.89
BRF1-212ENST00000547562 QRICH2Q9H0J4 1663 aa20.61■□□□□ 0.89
BRF1-212ENST00000547562 CARD14Q9BXL6 1004 aa20.58■□□□□ 0.88
BRF1-212ENST00000547562 EXOC6Q8TAG9 804 aa20.57■□□□□ 0.88
BRF1-212ENST00000547562 TRAK1Q9UPV9 953 aa20.56■□□□□ 0.88
BRF1-212ENST00000547562 ARHGAP31Q2M1Z3 1444 aa20.56■□□□□ 0.88
BRF1-212ENST00000547562 PLEKHH1Q9ULM0 1364 aa20.55■□□□□ 0.88
BRF1-212ENST00000547562 NEXMIFQ5QGS0 1516 aa20.55■□□□□ 0.88
BRF1-212ENST00000547562 MSH5O43196 834 aa20.54■□□□□ 0.88
BRF1-212ENST00000547562 GLI2P10070 1586 aa20.53■□□□□ 0.88
BRF1-212ENST00000547562 ZNF521Q96K83 1311 aa20.53■□□□□ 0.88
BRF1-212ENST00000547562 TMEM132EQ6IEE7 984 aa20.52■□□□□ 0.88
BRF1-212ENST00000547562 YEATS2Q9ULM3 1422 aa20.52■□□□□ 0.88
BRF1-212ENST00000547562 ARHGEF28Q8N1W1 1705 aaKnown RBP20.51■□□□□ 0.87
BRF1-212ENST00000547562 VGFO15240 615 aaPredicted RBP20.51■□□□□ 0.87
BRF1-212ENST00000547562 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
BRF1-212ENST00000547562 NSD3Q9BZ95 1437 aa20.48■□□□□ 0.87
BRF1-212ENST00000547562 GOLGA2Q08379 1002 aa20.48■□□□□ 0.87
BRF1-212ENST00000547562 MYO5BQ9ULV0 1848 aa20.48■□□□□ 0.87
BRF1-212ENST00000547562 PLIN1O60240 522 aa20.47■□□□□ 0.87
BRF1-212ENST00000547562 PREX1Q8TCU6 1659 aa20.47■□□□□ 0.87
BRF1-212ENST00000547562 USP32Q8NFA0 1604 aa20.47■□□□□ 0.87
BRF1-212ENST00000547562 IDI1Q13907 227 aa20.46■□□□□ 0.87
BRF1-212ENST00000547562 NUTM2DQ5VT03 806 aaPredicted RBP20.46■□□□□ 0.87
BRF1-212ENST00000547562 SLC12A5Q9H2X9 1139 aa20.46■□□□□ 0.87
BRF1-212ENST00000547562 SLC52A1Q9NWF4 448 aa20.46■□□□□ 0.87
BRF1-212ENST00000547562 CCDC146Q8IYE0 955 aa20.45■□□□□ 0.86
BRF1-212ENST00000547562 POLR3AO14802 1390 aaPredicted RBP20.45■□□□□ 0.86
BRF1-212ENST00000547562 ZFYVE9O95405 1425 aa20.45■□□□□ 0.86
BRF1-212ENST00000547562 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
BRF1-212ENST00000547562 TULP4Q9NRJ4 1543 aa20.43■□□□□ 0.86
BRF1-212ENST00000547562 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
BRF1-212ENST00000547562 TMEM131LA2VDJ0 1609 aa20.43■□□□□ 0.86
BRF1-212ENST00000547562 SLFN5Q08AF3 891 aa20.43■□□□□ 0.86
BRF1-212ENST00000547562 APAF1O14727 1248 aa20.42■□□□□ 0.86
BRF1-212ENST00000547562 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
BRF1-212ENST00000547562 SHPRHQ149N8 1683 aa20.42■□□□□ 0.86
BRF1-212ENST00000547562 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
BRF1-212ENST00000547562 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
BRF1-212ENST00000547562 TRMT2AQ8IZ69 625 aaKnown RBP20.41■□□□□ 0.86
BRF1-212ENST00000547562 NGEFQ8N5V2 710 aa20.4■□□□□ 0.86
BRF1-212ENST00000547562 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms