RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 MPHOSPH9Q99550 1183 aa16.35■□□□□ 0.21
GCN1-202ENST00000547263 NEXMIFQ5QGS0 1516 aa16.35■□□□□ 0.21
GCN1-202ENST00000547263 EID1Q9Y6B2 187 aa16.34■□□□□ 0.21
GCN1-202ENST00000547263 PLEKHG1Q9ULL1 1385 aa16.34■□□□□ 0.21
GCN1-202ENST00000547263 STAG3Q9UJ98 1225 aa16.33■□□□□ 0.2
GCN1-202ENST00000547263 NWD1Q149M9 1564 aa16.33■□□□□ 0.2
GCN1-202ENST00000547263 NRXN3Q9Y4C0 1643 aa16.32■□□□□ 0.2
GCN1-202ENST00000547263 DIP2AQ14689 1571 aa16.31■□□□□ 0.2
GCN1-202ENST00000547263 SETBP1Q9Y6X0 1596 aa16.31■□□□□ 0.2
GCN1-202ENST00000547263 SPATA31E1Q6ZUB1 1445 aa16.3■□□□□ 0.2
GCN1-202ENST00000547263 ADAMTS13Q76LX8 1427 aa16.3■□□□□ 0.2
GCN1-202ENST00000547263 PPLO60437 1756 aa16.29■□□□□ 0.2
GCN1-202ENST00000547263 IFT172Q9UG01 1749 aa16.29■□□□□ 0.2
GCN1-202ENST00000547263 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.29■□□□□ 0.2
GCN1-202ENST00000547263 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
GCN1-202ENST00000547263 CHD2O14647 1828 aaKnown RBP16.29■□□□□ 0.2
GCN1-202ENST00000547263 HDGFP51858 240 aaKnown RBP16.28■□□□□ 0.2
GCN1-202ENST00000547263 XIRP1Q702N8 1843 aaKnown RBP16.28■□□□□ 0.2
GCN1-202ENST00000547263 FOXD1Q16676 465 aa16.27■□□□□ 0.2
GCN1-202ENST00000547263 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
GCN1-202ENST00000547263 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
GCN1-202ENST00000547263 CCDC144AA2RUR9 1427 aa16.26■□□□□ 0.19
GCN1-202ENST00000547263 ANKRD30BQ9BXX2 1392 aa16.26■□□□□ 0.19
GCN1-202ENST00000547263 TBX22Q9Y458 520 aa16.25■□□□□ 0.19
GCN1-202ENST00000547263 PIK3R4Q99570 1358 aa16.25■□□□□ 0.19
GCN1-202ENST00000547263 RPGRIP1LQ68CZ1 1315 aa16.24■□□□□ 0.19
GCN1-202ENST00000547263 NKTRP30414 1462 aaKnown RBP16.24■□□□□ 0.19
GCN1-202ENST00000547263 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
GCN1-202ENST00000547263 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
GCN1-202ENST00000547263 ILDR1Q86SU0 546 aaPredicted RBP16.23■□□□□ 0.19
GCN1-202ENST00000547263 XRN1Q8IZH2 1706 aaKnown RBP16.22■□□□□ 0.19
GCN1-202ENST00000547263 KCNA6P17658 529 aa16.21■□□□□ 0.19
GCN1-202ENST00000547263 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
GCN1-202ENST00000547263 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
GCN1-202ENST00000547263 NRXN1Q9ULB1 1477 aa16.18■□□□□ 0.18
GCN1-202ENST00000547263 PPP1R15AO75807 674 aaPredicted RBP16.18■□□□□ 0.18
GCN1-202ENST00000547263 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
GCN1-202ENST00000547263 MYOM2P54296 1465 aa16.16■□□□□ 0.18
GCN1-202ENST00000547263 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
GCN1-202ENST00000547263 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
GCN1-202ENST00000547263 NCOA3Q9Y6Q9 1424 aa16.16■□□□□ 0.18
GCN1-202ENST00000547263 VGFO15240 615 aaPredicted RBP16.15■□□□□ 0.18
GCN1-202ENST00000547263 TRIM26Q12899 539 aaPredicted RBP16.15■□□□□ 0.18
GCN1-202ENST00000547263 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
GCN1-202ENST00000547263 METP08581 1390 aa16.13■□□□□ 0.17
GCN1-202ENST00000547263 TMEM94Q12767 1356 aa16.13■□□□□ 0.17
GCN1-202ENST00000547263 ASXL1Q8IXJ9 1541 aa16.12■□□□□ 0.17
GCN1-202ENST00000547263 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
GCN1-202ENST00000547263 LAMC1P11047 1609 aa16.1■□□□□ 0.17
GCN1-202ENST00000547263 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
GCN1-202ENST00000547263 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.17
GCN1-202ENST00000547263 DHX57Q6P158 1386 aaKnown RBP16.08■□□□□ 0.16
GCN1-202ENST00000547263 TECPR2O15040 1411 aa16.08■□□□□ 0.16
GCN1-202ENST00000547263 RGL3Q3MIN7 710 aa16.07■□□□□ 0.16
GCN1-202ENST00000547263 BCANQ96GW7 911 aa16.07■□□□□ 0.16
GCN1-202ENST00000547263 STAC3Q96MF2 364 aa16.07■□□□□ 0.16
GCN1-202ENST00000547263 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
GCN1-202ENST00000547263 UBAP1LF5GYI3 381 aa16.06■□□□□ 0.16
GCN1-202ENST00000547263 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.05■□□□□ 0.16
GCN1-202ENST00000547263 TOM1O60784 492 aa16.05■□□□□ 0.16
GCN1-202ENST00000547263 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
GCN1-202ENST00000547263 DCCP43146 1447 aa16.04■□□□□ 0.16
GCN1-202ENST00000547263 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
GCN1-202ENST00000547263 NALCNQ8IZF0 1738 aa16.03■□□□□ 0.16
GCN1-202ENST00000547263 C14orf93Q9H972 538 aaKnown RBP16.03■□□□□ 0.16
GCN1-202ENST00000547263 ADGRB1O14514 1584 aa16.03■□□□□ 0.16
GCN1-202ENST00000547263 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.15
GCN1-202ENST00000547263 LRPPRCP42704 1394 aaKnown RBP16.01■□□□□ 0.15
GCN1-202ENST00000547263 ABCC11Q96J66 1382 aa16.01■□□□□ 0.15
GCN1-202ENST00000547263 KIAA1210Q9ULL0 1709 aa16.01■□□□□ 0.15
GCN1-202ENST00000547263 ADGRL3Q9HAR2 1447 aa16.01■□□□□ 0.15
GCN1-202ENST00000547263 MSH6P52701 1360 aa16■□□□□ 0.15
GCN1-202ENST00000547263 ROBO2Q9HCK4 1378 aa16■□□□□ 0.15
GCN1-202ENST00000547263 RBM33Q96EV2 1170 aaKnown RBP15.99■□□□□ 0.15
GCN1-202ENST00000547263 C19orf44Q9H6X5 657 aa15.99■□□□□ 0.15
GCN1-202ENST00000547263 DLC1Q96QB1 1528 aa15.99■□□□□ 0.15
GCN1-202ENST00000547263 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
GCN1-202ENST00000547263 ROBO1Q9Y6N7 1651 aa15.98■□□□□ 0.15
GCN1-202ENST00000547263 SIRT1Q96EB6 747 aa15.97■□□□□ 0.15
GCN1-202ENST00000547263 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.15
GCN1-202ENST00000547263 CDC42BPGQ6DT37 1551 aa15.96■□□□□ 0.14
GCN1-202ENST00000547263 DCAF11Q8TEB1 546 aa15.95■□□□□ 0.14
GCN1-202ENST00000547263 MST1RQ04912 1400 aa15.94■□□□□ 0.14
GCN1-202ENST00000547263 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
GCN1-202ENST00000547263 PIP4K2BP78356 416 aa15.92■□□□□ 0.14
GCN1-202ENST00000547263 TMEM132EQ6IEE7 984 aa15.92■□□□□ 0.14
GCN1-202ENST00000547263 SLAIN2Q9P270 581 aa15.92■□□□□ 0.14
GCN1-202ENST00000547263 AHDC1Q5TGY3 1603 aaPredicted RBP15.92■□□□□ 0.14
GCN1-202ENST00000547263 HSPA1LP34931 641 aa15.91■□□□□ 0.14
GCN1-202ENST00000547263 SIN3AQ96ST3 1273 aa15.91■□□□□ 0.14
GCN1-202ENST00000547263 ADGRB2O60241 1585 aa15.91■□□□□ 0.14
GCN1-202ENST00000547263 ARHGEF28Q8N1W1 1705 aaKnown RBP15.91■□□□□ 0.14
GCN1-202ENST00000547263 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
GCN1-202ENST00000547263 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
GCN1-202ENST00000547263 L3MBTL2Q969R5 705 aa15.89■□□□□ 0.13
GCN1-202ENST00000547263 COL16A1Q07092 1604 aaPredicted RBP15.89■□□□□ 0.13
GCN1-202ENST00000547263 TRPM1Q7Z4N2 1603 aa15.89■□□□□ 0.13
GCN1-202ENST00000547263 FMN2Q9NZ56 1722 aa15.88■□□□□ 0.13
GCN1-202ENST00000547263 KDM2AQ9Y2K7 1162 aa15.88■□□□□ 0.13
GCN1-202ENST00000547263 C1orf167Q5SNV9 1468 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms