RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ANKRD50Q9ULJ7 1429 aa18.1■□□□□ 0.49
HDAC7-226ENST00000547259 ROCK1Q13464 1354 aa18.1■□□□□ 0.49
HDAC7-226ENST00000547259 TET3O43151 1660 aa18.09■□□□□ 0.49
HDAC7-226ENST00000547259 TMEM94Q12767 1356 aa18.09■□□□□ 0.49
HDAC7-226ENST00000547259 SENP3Q9H4L4 574 aaPredicted RBP18.09■□□□□ 0.49
HDAC7-226ENST00000547259 SLC26A8Q96RN1 970 aa18.08■□□□□ 0.48
HDAC7-226ENST00000547259 NKTRP30414 1462 aaKnown RBP18.07■□□□□ 0.48
HDAC7-226ENST00000547259 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
HDAC7-226ENST00000547259 MSH6P52701 1360 aa18.05■□□□□ 0.48
HDAC7-226ENST00000547259 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
HDAC7-226ENST00000547259 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
HDAC7-226ENST00000547259 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
HDAC7-226ENST00000547259 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
HDAC7-226ENST00000547259 PLEKHG1Q9ULL1 1385 aa18.03■□□□□ 0.48
HDAC7-226ENST00000547259 NAIPQ13075 1403 aa18.02■□□□□ 0.48
HDAC7-226ENST00000547259 CHD2O14647 1828 aaKnown RBP18.01■□□□□ 0.47
HDAC7-226ENST00000547259 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
HDAC7-226ENST00000547259 ROBO1Q9Y6N7 1651 aa18■□□□□ 0.47
HDAC7-226ENST00000547259 NCOA3Q9Y6Q9 1424 aa18■□□□□ 0.47
HDAC7-226ENST00000547259 SLAIN2Q9P270 581 aa18■□□□□ 0.47
HDAC7-226ENST00000547259 ZFYVE9O95405 1425 aa17.99■□□□□ 0.47
HDAC7-226ENST00000547259 RIMS2Q9UQ26 1411 aa17.99■□□□□ 0.47
HDAC7-226ENST00000547259 MYO5BQ9ULV0 1848 aa17.99■□□□□ 0.47
HDAC7-226ENST00000547259 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
HDAC7-226ENST00000547259 UNC13BO14795 1591 aa17.98■□□□□ 0.47
HDAC7-226ENST00000547259 TMEM131LA2VDJ0 1609 aa17.98■□□□□ 0.47
HDAC7-226ENST00000547259 CHGAP10645 457 aaKnown RBP17.97■□□□□ 0.47
HDAC7-226ENST00000547259 PIK3R4Q99570 1358 aa17.96■□□□□ 0.47
HDAC7-226ENST00000547259 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
HDAC7-226ENST00000547259 C14orf37Q86TY3 774 aa17.94■□□□□ 0.46
HDAC7-226ENST00000547259 RBM33Q96EV2 1170 aaKnown RBP17.94■□□□□ 0.46
HDAC7-226ENST00000547259 DIP2AQ14689 1571 aa17.94■□□□□ 0.46
HDAC7-226ENST00000547259 RAB3GAP2Q9H2M9 1393 aa17.93■□□□□ 0.46
HDAC7-226ENST00000547259 JCADQ9P266 1359 aa17.93■□□□□ 0.46
HDAC7-226ENST00000547259 CADPS2Q86UW7 1296 aa17.93■□□□□ 0.46
HDAC7-226ENST00000547259 PHLPP1O60346 1717 aa17.92■□□□□ 0.46
HDAC7-226ENST00000547259 IQGAP3Q86VI3 1631 aa17.92■□□□□ 0.46
HDAC7-226ENST00000547259 C19orf44Q9H6X5 657 aa17.92■□□□□ 0.46
HDAC7-226ENST00000547259 E9PCH4 1651 aa17.92■□□□□ 0.46
HDAC7-226ENST00000547259 ATF3P18847 181 aa17.91■□□□□ 0.46
HDAC7-226ENST00000547259 NUP155O75694 1391 aa17.91■□□□□ 0.46
HDAC7-226ENST00000547259 TRPM2O94759 1503 aa17.88■□□□□ 0.45
HDAC7-226ENST00000547259 SPATA31A6Q5VVP1 1343 aa17.87■□□□□ 0.45
HDAC7-226ENST00000547259 ADAMTS13Q76LX8 1427 aa17.87■□□□□ 0.45
HDAC7-226ENST00000547259 POTEAQ6S8J7 498 aa17.86■□□□□ 0.45
HDAC7-226ENST00000547259 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
HDAC7-226ENST00000547259 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
HDAC7-226ENST00000547259 ACIN1Q9UKV3 1341 aaKnown RBP17.83■□□□□ 0.44
HDAC7-226ENST00000547259 NUTM2DQ5VT03 806 aaPredicted RBP17.83■□□□□ 0.44
HDAC7-226ENST00000547259 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
HDAC7-226ENST00000547259 DCCP43146 1447 aa17.82■□□□□ 0.44
HDAC7-226ENST00000547259 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
HDAC7-226ENST00000547259 ZNF772Q68DY9 489 aaPredicted RBP17.82■□□□□ 0.44
HDAC7-226ENST00000547259 COL16A1Q07092 1604 aaPredicted RBP17.82■□□□□ 0.44
HDAC7-226ENST00000547259 HRCP23327 699 aa17.81■□□□□ 0.44
HDAC7-226ENST00000547259 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
HDAC7-226ENST00000547259 AHDC1Q5TGY3 1603 aaPredicted RBP17.8■□□□□ 0.44
HDAC7-226ENST00000547259 ZNF326Q5BKZ1 582 aaKnown RBP17.8■□□□□ 0.44
HDAC7-226ENST00000547259 SHPRHQ149N8 1683 aa17.78■□□□□ 0.44
HDAC7-226ENST00000547259 SETBP1Q9Y6X0 1596 aa17.78■□□□□ 0.44
HDAC7-226ENST00000547259 BRINP3Q76B58 766 aa17.75■□□□□ 0.43
HDAC7-226ENST00000547259 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
HDAC7-226ENST00000547259 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
HDAC7-226ENST00000547259 KIF1BO60333 1816 aa17.74■□□□□ 0.43
HDAC7-226ENST00000547259 LRRC59Q96AG4 307 aaKnown RBP17.73■□□□□ 0.43
HDAC7-226ENST00000547259 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
HDAC7-226ENST00000547259 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
HDAC7-226ENST00000547259 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
HDAC7-226ENST00000547259 RXRBP28702 533 aa17.7■□□□□ 0.42
HDAC7-226ENST00000547259 MPHOSPH9Q99550 1183 aa17.7■□□□□ 0.42
HDAC7-226ENST00000547259 LRP6O75581 1613 aa17.69■□□□□ 0.42
HDAC7-226ENST00000547259 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
HDAC7-226ENST00000547259 ASXL1Q8IXJ9 1541 aa17.69■□□□□ 0.42
HDAC7-226ENST00000547259 METP08581 1390 aa17.68■□□□□ 0.42
HDAC7-226ENST00000547259 MST1RQ04912 1400 aa17.68■□□□□ 0.42
HDAC7-226ENST00000547259 ADGRL3Q9HAR2 1447 aa17.68■□□□□ 0.42
HDAC7-226ENST00000547259 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
HDAC7-226ENST00000547259 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
HDAC7-226ENST00000547259 NUTM2BA6NNL0 878 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-226ENST00000547259 NUTM2EB1AL46 878 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-226ENST00000547259 NUTM2AQ8IVF1 878 aaPredicted RBP17.67■□□□□ 0.42
HDAC7-226ENST00000547259 NHSL1Q5SYE7 1610 aa17.67■□□□□ 0.42
HDAC7-226ENST00000547259 NEXMIFQ5QGS0 1516 aa17.67■□□□□ 0.42
HDAC7-226ENST00000547259 CLTCL1P53675 1640 aa17.66■□□□□ 0.42
HDAC7-226ENST00000547259 CDK12Q9NYV4 1490 aaPredicted RBP17.65■□□□□ 0.42
HDAC7-226ENST00000547259 PTCH1Q13635 1447 aa17.63■□□□□ 0.41
HDAC7-226ENST00000547259 FOXD1Q16676 465 aa17.62■□□□□ 0.41
HDAC7-226ENST00000547259 UPF1Q92900 1129 aaKnown RBP eCLIP17.62■□□□□ 0.41
HDAC7-226ENST00000547259 AFF2P51816 1311 aa17.62■□□□□ 0.41
HDAC7-226ENST00000547259 NALCNQ8IZF0 1738 aa17.61■□□□□ 0.41
HDAC7-226ENST00000547259 RBM6P78332 1123 aaKnown RBP17.59■□□□□ 0.41
HDAC7-226ENST00000547259 CCER1Q8TC90 406 aaPredicted RBP17.59■□□□□ 0.41
HDAC7-226ENST00000547259 C1orf167Q5SNV9 1468 aa17.58■□□□□ 0.41
HDAC7-226ENST00000547259 PRAG1Q86YV5 1406 aa17.58■□□□□ 0.41
HDAC7-226ENST00000547259 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
HDAC7-226ENST00000547259 NGLY1Q96IV0 654 aa17.58■□□□□ 0.4
HDAC7-226ENST00000547259 C8orf37Q96NL8 207 aa17.57■□□□□ 0.4
HDAC7-226ENST00000547259 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
HDAC7-226ENST00000547259 LAMC1P11047 1609 aa17.57■□□□□ 0.4
HDAC7-226ENST00000547259 SOS2Q07890 1332 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms