RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 ADGRB3O60242 1522 aa30.85■■■□□ 2.53
SCN8A-204ENST00000546961 ITGAEP38570 1179 aa30.84■■■□□ 2.53
SCN8A-204ENST00000546961 FAM135BQ49AJ0 1406 aa30.83■■■□□ 2.53
SCN8A-204ENST00000546961 XIRP1Q702N8 1843 aaKnown RBP30.83■■■□□ 2.53
SCN8A-204ENST00000546961 PPARGC1BQ86YN6 1023 aaKnown RBP30.83■■■□□ 2.53
SCN8A-204ENST00000546961 RIMS2Q9UQ26 1411 aa30.8■■■□□ 2.52
SCN8A-204ENST00000546961 NUTM2DQ5VT03 806 aaPredicted RBP30.78■■■□□ 2.52
SCN8A-204ENST00000546961 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.77■■■□□ 2.52
SCN8A-204ENST00000546961 ROCK1Q13464 1354 aa30.77■■■□□ 2.52
SCN8A-204ENST00000546961 PLEKHG1Q9ULL1 1385 aa30.77■■■□□ 2.52
SCN8A-204ENST00000546961 ZFYVE9O95405 1425 aa30.76■■■□□ 2.51
SCN8A-204ENST00000546961 TBX22Q9Y458 520 aa30.75■■■□□ 2.51
SCN8A-204ENST00000546961 SLAIN2Q9P270 581 aa30.74■■■□□ 2.51
SCN8A-204ENST00000546961 NUP155O75694 1391 aa30.74■■■□□ 2.51
SCN8A-204ENST00000546961 MSH6P52701 1360 aa30.73■■■□□ 2.51
SCN8A-204ENST00000546961 RGS17Q9UGC6 210 aaPredicted RBP30.72■■■□□ 2.51
SCN8A-204ENST00000546961 NKTRP30414 1462 aaKnown RBP30.7■■■□□ 2.51
SCN8A-204ENST00000546961 TMEM131LA2VDJ0 1609 aa30.69■■■□□ 2.5
SCN8A-204ENST00000546961 UNC13BO14795 1591 aa30.68■■■□□ 2.5
SCN8A-204ENST00000546961 C14orf37Q86TY3 774 aa30.67■■■□□ 2.5
SCN8A-204ENST00000546961 MYO5BQ9ULV0 1848 aa30.67■■■□□ 2.5
SCN8A-204ENST00000546961 GCC2Q8IWJ2 1684 aa30.65■■■□□ 2.5
SCN8A-204ENST00000546961 NWD1Q149M9 1564 aa30.65■■■□□ 2.5
SCN8A-204ENST00000546961 E9PCH4 1651 aa30.62■■■□□ 2.49
SCN8A-204ENST00000546961 ROBO1Q9Y6N7 1651 aa30.62■■■□□ 2.49
SCN8A-204ENST00000546961 CHD2O14647 1828 aaKnown RBP30.59■■■□□ 2.49
SCN8A-204ENST00000546961 ADAMTS13Q76LX8 1427 aa30.59■■■□□ 2.49
SCN8A-204ENST00000546961 IQGAP3Q86VI3 1631 aa30.58■■■□□ 2.49
SCN8A-204ENST00000546961 AMOTL2Q9Y2J4 779 aa30.57■■■□□ 2.48
SCN8A-204ENST00000546961 POTEAQ6S8J7 498 aa30.56■■■□□ 2.48
SCN8A-204ENST00000546961 C19orf44Q9H6X5 657 aa30.56■■■□□ 2.48
SCN8A-204ENST00000546961 NCOA3Q9Y6Q9 1424 aa30.55■■■□□ 2.48
SCN8A-204ENST00000546961 ATF3P18847 181 aa30.54■■■□□ 2.48
SCN8A-204ENST00000546961 ZNF326Q5BKZ1 582 aaKnown RBP30.54■■■□□ 2.48
SCN8A-204ENST00000546961 PIK3R4Q99570 1358 aa30.54■■■□□ 2.48
SCN8A-204ENST00000546961 CADPS2Q86UW7 1296 aa30.53■■■□□ 2.48
SCN8A-204ENST00000546961 JCADQ9P266 1359 aa30.5■■■□□ 2.47
SCN8A-204ENST00000546961 PTPRUQ92729 1446 aa30.45■■■□□ 2.46
SCN8A-204ENST00000546961 DIP2AQ14689 1571 aa30.44■■■□□ 2.46
SCN8A-204ENST00000546961 PHLPP1O60346 1717 aa30.44■■■□□ 2.46
SCN8A-204ENST00000546961 TRPM2O94759 1503 aa30.42■■■□□ 2.46
SCN8A-204ENST00000546961 TRIM52Q96A61 297 aa30.38■■■□□ 2.45
SCN8A-204ENST00000546961 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.38■■■□□ 2.45
SCN8A-204ENST00000546961 MEX3CQ5U5Q3 659 aaKnown RBP30.37■■■□□ 2.45
SCN8A-204ENST00000546961 BRINP3Q76B58 766 aa30.37■■■□□ 2.45
SCN8A-204ENST00000546961 METP08581 1390 aa30.36■■■□□ 2.45
SCN8A-204ENST00000546961 SPATA31A6Q5VVP1 1343 aa30.35■■■□□ 2.45
SCN8A-204ENST00000546961 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
SCN8A-204ENST00000546961 SPHKAPQ2M3C7 1700 aa30.33■■■□□ 2.45
SCN8A-204ENST00000546961 COL16A1Q07092 1604 aaPredicted RBP30.33■■■□□ 2.45
SCN8A-204ENST00000546961 NAIPQ13075 1403 aa30.32■■■□□ 2.44
SCN8A-204ENST00000546961 SETBP1Q9Y6X0 1596 aa30.29■■■□□ 2.44
SCN8A-204ENST00000546961 NUTM2BA6NNL0 878 aaPredicted RBP30.29■■■□□ 2.44
SCN8A-204ENST00000546961 NUTM2EB1AL46 878 aaPredicted RBP30.29■■■□□ 2.44
SCN8A-204ENST00000546961 NUTM2AQ8IVF1 878 aaPredicted RBP30.29■■■□□ 2.44
SCN8A-204ENST00000546961 NRXN3Q9Y4C0 1643 aa30.28■■■□□ 2.44
SCN8A-204ENST00000546961 ZNF772Q68DY9 489 aaPredicted RBP30.26■■■□□ 2.43
SCN8A-204ENST00000546961 SLC4A1APQ9BWU0 796 aaKnown RBP30.26■■■□□ 2.43
SCN8A-204ENST00000546961 DCCP43146 1447 aa30.25■■■□□ 2.43
SCN8A-204ENST00000546961 VGFO15240 615 aaPredicted RBP30.25■■■□□ 2.43
SCN8A-204ENST00000546961 LRP6O75581 1613 aa30.25■■■□□ 2.43
SCN8A-204ENST00000546961 AHDC1Q5TGY3 1603 aaPredicted RBP30.25■■■□□ 2.43
SCN8A-204ENST00000546961 CLTCL1P53675 1640 aa30.23■■■□□ 2.43
SCN8A-204ENST00000546961 XRN1Q8IZH2 1706 aaKnown RBP30.21■■■□□ 2.43
SCN8A-204ENST00000546961 NEXMIFQ5QGS0 1516 aa30.21■■■□□ 2.43
SCN8A-204ENST00000546961 MST1RQ04912 1400 aa30.21■■■□□ 2.43
SCN8A-204ENST00000546961 DDX17Q92841 729 aaKnown RBP30.2■■■□□ 2.43
SCN8A-204ENST00000546961 LRRC59Q96AG4 307 aaKnown RBP30.2■■■□□ 2.43
SCN8A-204ENST00000546961 RPGRIP1LQ68CZ1 1315 aa30.18■■■□□ 2.42
SCN8A-204ENST00000546961 ASXL1Q8IXJ9 1541 aa30.17■■■□□ 2.42
SCN8A-204ENST00000546961 HFM1A2PYH4 1435 aa30.16■■■□□ 2.42
SCN8A-204ENST00000546961 ADGRL3Q9HAR2 1447 aa30.16■■■□□ 2.42
SCN8A-204ENST00000546961 FOXD1Q16676 465 aa30.14■■■□□ 2.42
SCN8A-204ENST00000546961 KIF1BO60333 1816 aa30.14■■■□□ 2.42
SCN8A-204ENST00000546961 RXRBP28702 533 aa30.13■■■□□ 2.41
SCN8A-204ENST00000546961 SETD5Q9C0A6 1442 aa30.13■■■□□ 2.41
SCN8A-204ENST00000546961 SHPRHQ149N8 1683 aa30.12■■■□□ 2.41
SCN8A-204ENST00000546961 ROBO2Q9HCK4 1378 aa30.1■■■□□ 2.41
SCN8A-204ENST00000546961 AFF2P51816 1311 aa30.09■■■□□ 2.41
SCN8A-204ENST00000546961 ORAI2Q96SN7 254 aa30.08■■■□□ 2.41
SCN8A-204ENST00000546961 C1orf167Q5SNV9 1468 aa30.06■■■□□ 2.4
SCN8A-204ENST00000546961 SETD1AO15047 1707 aaKnown RBP30.05■■■□□ 2.4
SCN8A-204ENST00000546961 RGL3Q3MIN7 710 aa30.05■■■□□ 2.4
SCN8A-204ENST00000546961 C8orf37Q96NL8 207 aa30.05■■■□□ 2.4
SCN8A-204ENST00000546961 PTCH1Q13635 1447 aa30.03■■■□□ 2.4
SCN8A-204ENST00000546961 PNPLA6Q8IY17 1366 aa30.03■■■□□ 2.4
SCN8A-204ENST00000546961 UPF1Q92900 1129 aaKnown RBP eCLIP30.02■■■□□ 2.4
SCN8A-204ENST00000546961 ADAMTS2O95450 1211 aa30.01■■■□□ 2.39
SCN8A-204ENST00000546961 QTRT2Q9H974 415 aaKnown RBP30.01■■■□□ 2.39
SCN8A-204ENST00000546961 NALCNQ8IZF0 1738 aa30.01■■■□□ 2.39
SCN8A-204ENST00000546961 NHSL1Q5SYE7 1610 aa30■■■□□ 2.39
SCN8A-204ENST00000546961 MPHOSPH9Q99550 1183 aa30■■■□□ 2.39
SCN8A-204ENST00000546961 ADGRF5Q8IZF2 1346 aa29.99■■■□□ 2.39
SCN8A-204ENST00000546961 NGLY1Q96IV0 654 aa29.99■■■□□ 2.39
SCN8A-204ENST00000546961 STK26Q9P289 416 aa29.99■■■□□ 2.39
SCN8A-204ENST00000546961 SOS2Q07890 1332 aaPredicted RBP29.96■■■□□ 2.39
SCN8A-204ENST00000546961 ESCO1Q5FWF5 840 aa29.95■■■□□ 2.39
SCN8A-204ENST00000546961 CCDC144AA2RUR9 1427 aa29.95■■■□□ 2.38
SCN8A-204ENST00000546961 RBM6P78332 1123 aaKnown RBP29.93■■■□□ 2.38
SCN8A-204ENST00000546961 WAPLQ7Z5K2 1190 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms