RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 RIMS2Q9UQ26 1411 aa21.28■■□□□ 1
DDX54-203ENST00000546869 RPGRIP1LQ68CZ1 1315 aa21.28■■□□□ 1
DDX54-203ENST00000546869 PLEKHG1Q9ULL1 1385 aa21.23■□□□□ 0.99
DDX54-203ENST00000546869 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
DDX54-203ENST00000546869 KIF1BO60333 1816 aa21.22■□□□□ 0.99
DDX54-203ENST00000546869 SPATA31E1Q6ZUB1 1445 aa21.22■□□□□ 0.99
DDX54-203ENST00000546869 MYO5BQ9ULV0 1848 aa21.22■□□□□ 0.99
DDX54-203ENST00000546869 PPP1R15AO75807 674 aaPredicted RBP21.21■□□□□ 0.99
DDX54-203ENST00000546869 IQGAP1P46940 1657 aa21.21■□□□□ 0.99
DDX54-203ENST00000546869 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
DDX54-203ENST00000546869 PCGF6Q9BYE7 350 aa21.17■□□□□ 0.98
DDX54-203ENST00000546869 TBX22Q9Y458 520 aa21.17■□□□□ 0.98
DDX54-203ENST00000546869 NEXMIFQ5QGS0 1516 aa21.17■□□□□ 0.98
DDX54-203ENST00000546869 DHX57Q6P158 1386 aaKnown RBP21.16■□□□□ 0.98
DDX54-203ENST00000546869 ZNF335Q9H4Z2 1342 aaPredicted RBP21.14■□□□□ 0.97
DDX54-203ENST00000546869 NUTM2DQ5VT03 806 aaPredicted RBP21.14■□□□□ 0.97
DDX54-203ENST00000546869 LTBP4Q8N2S1 1624 aa21.14■□□□□ 0.97
DDX54-203ENST00000546869 RGL3Q3MIN7 710 aa21.13■□□□□ 0.97
DDX54-203ENST00000546869 STAC3Q96MF2 364 aa21.13■□□□□ 0.97
DDX54-203ENST00000546869 BCANQ96GW7 911 aa21.12■□□□□ 0.97
DDX54-203ENST00000546869 SLC26A8Q96RN1 970 aa21.12■□□□□ 0.97
DDX54-203ENST00000546869 ADAMTS13Q76LX8 1427 aa21.12■□□□□ 0.97
DDX54-203ENST00000546869 SETBP1Q9Y6X0 1596 aa21.1■□□□□ 0.97
DDX54-203ENST00000546869 PIK3R4Q99570 1358 aa21.1■□□□□ 0.97
DDX54-203ENST00000546869 KCNA6P17658 529 aa21.09■□□□□ 0.97
DDX54-203ENST00000546869 CERKQ8TCT0 537 aa21.09■□□□□ 0.97
DDX54-203ENST00000546869 DIP2AQ14689 1571 aa21.09■□□□□ 0.97
DDX54-203ENST00000546869 CPS1P31327 1500 aa21.08■□□□□ 0.96
DDX54-203ENST00000546869 PPLO60437 1756 aa21.08■□□□□ 0.96
DDX54-203ENST00000546869 IQSEC2Q5JU85 1478 aa21.05■□□□□ 0.96
DDX54-203ENST00000546869 ADGRF5Q8IZF2 1346 aa21.04■□□□□ 0.96
DDX54-203ENST00000546869 NRXN3Q9Y4C0 1643 aa21.04■□□□□ 0.96
DDX54-203ENST00000546869 MYOM2P54296 1465 aa21.04■□□□□ 0.96
DDX54-203ENST00000546869 NRXN1Q9ULB1 1477 aa21.03■□□□□ 0.96
DDX54-203ENST00000546869 IFT172Q9UG01 1749 aa21.03■□□□□ 0.96
DDX54-203ENST00000546869 PIK3C2GO75747 1445 aa21.01■□□□□ 0.95
DDX54-203ENST00000546869 DCAF11Q8TEB1 546 aa21■□□□□ 0.95
DDX54-203ENST00000546869 SIN3AQ96ST3 1273 aa21■□□□□ 0.95
DDX54-203ENST00000546869 NWD1Q149M9 1564 aa21■□□□□ 0.95
DDX54-203ENST00000546869 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
DDX54-203ENST00000546869 METP08581 1390 aa20.98■□□□□ 0.95
DDX54-203ENST00000546869 ALKQ9UM73 1620 aa20.98■□□□□ 0.95
DDX54-203ENST00000546869 C14orf93Q9H972 538 aaKnown RBP20.98■□□□□ 0.95
DDX54-203ENST00000546869 NKTRP30414 1462 aaKnown RBP20.98■□□□□ 0.95
DDX54-203ENST00000546869 CLSPNQ9HAW4 1339 aa20.98■□□□□ 0.95
DDX54-203ENST00000546869 LRRC7Q96NW7 1537 aa20.98■□□□□ 0.95
DDX54-203ENST00000546869 STRCP1A6NGW2 1772 aa20.97■□□□□ 0.95
DDX54-203ENST00000546869 CHD2O14647 1828 aaKnown RBP20.97■□□□□ 0.95
DDX54-203ENST00000546869 AMOTL2Q9Y2J4 779 aa20.97■□□□□ 0.95
DDX54-203ENST00000546869 PTPRUQ92729 1446 aa20.95■□□□□ 0.95
DDX54-203ENST00000546869 NCOA3Q9Y6Q9 1424 aa20.95■□□□□ 0.94
DDX54-203ENST00000546869 PROSER2Q86WR7 435 aaPredicted RBP20.94■□□□□ 0.94
DDX54-203ENST00000546869 KDM2AQ9Y2K7 1162 aa20.94■□□□□ 0.94
DDX54-203ENST00000546869 PRAG1Q86YV5 1406 aa20.94■□□□□ 0.94
DDX54-203ENST00000546869 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
DDX54-203ENST00000546869 L3MBTL2Q969R5 705 aa20.93■□□□□ 0.94
DDX54-203ENST00000546869 SETD1AO15047 1707 aaKnown RBP20.92■□□□□ 0.94
DDX54-203ENST00000546869 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
DDX54-203ENST00000546869 FBXO41Q8TF61 875 aa20.91■□□□□ 0.94
DDX54-203ENST00000546869 CFAP70Q5T0N1 1121 aa20.9■□□□□ 0.94
DDX54-203ENST00000546869 XRN1Q8IZH2 1706 aaKnown RBP20.89■□□□□ 0.93
DDX54-203ENST00000546869 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
DDX54-203ENST00000546869 LRPPRCP42704 1394 aaKnown RBP20.87■□□□□ 0.93
DDX54-203ENST00000546869 LAMC1P11047 1609 aa20.87■□□□□ 0.93
DDX54-203ENST00000546869 SIRT1Q96EB6 747 aa20.87■□□□□ 0.93
DDX54-203ENST00000546869 TECPR2O15040 1411 aa20.87■□□□□ 0.93
DDX54-203ENST00000546869 PTCH1Q13635 1447 aa20.87■□□□□ 0.93
DDX54-203ENST00000546869 TMEM132EQ6IEE7 984 aa20.85■□□□□ 0.93
DDX54-203ENST00000546869 TIMELESSQ9UNS1 1208 aa20.85■□□□□ 0.93
DDX54-203ENST00000546869 TOM1O60784 492 aa20.84■□□□□ 0.93
DDX54-203ENST00000546869 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.93
DDX54-203ENST00000546869 C19orf44Q9H6X5 657 aa20.83■□□□□ 0.93
DDX54-203ENST00000546869 YTHDC2Q9H6S0 1430 aaKnown RBP20.83■□□□□ 0.93
DDX54-203ENST00000546869 TONSLQ96HA7 1378 aa20.83■□□□□ 0.92
DDX54-203ENST00000546869 ADGRB1O14514 1584 aa20.82■□□□□ 0.92
DDX54-203ENST00000546869 ROBO2Q9HCK4 1378 aa20.82■□□□□ 0.92
DDX54-203ENST00000546869 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
DDX54-203ENST00000546869 UBAP1LF5GYI3 381 aa20.81■□□□□ 0.92
DDX54-203ENST00000546869 MSH6P52701 1360 aa20.81■□□□□ 0.92
DDX54-203ENST00000546869 CCER1Q8TC90 406 aaPredicted RBP20.8■□□□□ 0.92
DDX54-203ENST00000546869 RBM33Q96EV2 1170 aaKnown RBP20.8■□□□□ 0.92
DDX54-203ENST00000546869 FAM135BQ49AJ0 1406 aa20.79■□□□□ 0.92
DDX54-203ENST00000546869 KIAA1210Q9ULL0 1709 aa20.78■□□□□ 0.92
DDX54-203ENST00000546869 STK26Q9P289 416 aa20.78■□□□□ 0.92
DDX54-203ENST00000546869 DCCP43146 1447 aa20.77■□□□□ 0.91
DDX54-203ENST00000546869 CADPS2Q86UW7 1296 aa20.76■□□□□ 0.91
DDX54-203ENST00000546869 DLC1Q96QB1 1528 aa20.76■□□□□ 0.91
DDX54-203ENST00000546869 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
DDX54-203ENST00000546869 C14orf37Q86TY3 774 aa20.75■□□□□ 0.91
DDX54-203ENST00000546869 ADGRL3Q9HAR2 1447 aa20.75■□□□□ 0.91
DDX54-203ENST00000546869 NBPF1Q3BBV0 1214 aa20.74■□□□□ 0.91
DDX54-203ENST00000546869 ILDR1Q86SU0 546 aaPredicted RBP20.74■□□□□ 0.91
DDX54-203ENST00000546869 NBPF8Q3BBV2 869 aa20.73■□□□□ 0.91
DDX54-203ENST00000546869 WAPLQ7Z5K2 1190 aa20.73■□□□□ 0.91
DDX54-203ENST00000546869 ATF3P18847 181 aa20.72■□□□□ 0.91
DDX54-203ENST00000546869 SLAIN2Q9P270 581 aa20.72■□□□□ 0.91
DDX54-203ENST00000546869 TRAK1Q9UPV9 953 aa20.71■□□□□ 0.91
DDX54-203ENST00000546869 PRAM1Q96QH2 718 aa20.69■□□□□ 0.9
DDX54-203ENST00000546869 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
DDX54-203ENST00000546869 GPRASP1Q5JY77 1395 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms