RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 MYO5BQ9ULV0 1848 aa22.64■■□□□ 1.22
USP15-206ENST00000546718 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
USP15-206ENST00000546718 PROSER2Q86WR7 435 aaPredicted RBP22.62■■□□□ 1.21
USP15-206ENST00000546718 SLC52A1Q9NWF4 448 aa22.61■■□□□ 1.21
USP15-206ENST00000546718 ANKRD50Q9ULJ7 1429 aa22.61■■□□□ 1.21
USP15-206ENST00000546718 TMEM131LA2VDJ0 1609 aa22.6■■□□□ 1.21
USP15-206ENST00000546718 CHD2O14647 1828 aaKnown RBP22.59■■□□□ 1.21
USP15-206ENST00000546718 PLEKHG1Q9ULL1 1385 aa22.58■■□□□ 1.21
USP15-206ENST00000546718 UNC13BO14795 1591 aa22.58■■□□□ 1.2
USP15-206ENST00000546718 POTEAQ6S8J7 498 aa22.57■■□□□ 1.2
USP15-206ENST00000546718 MSH6P52701 1360 aa22.57■■□□□ 1.2
USP15-206ENST00000546718 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
USP15-206ENST00000546718 PHLPP1O60346 1717 aa22.56■■□□□ 1.2
USP15-206ENST00000546718 FAM50AQ14320 339 aaKnown RBP22.54■■□□□ 1.2
USP15-206ENST00000546718 E9PCH4 1651 aa22.53■■□□□ 1.2
USP15-206ENST00000546718 BCANQ96GW7 911 aa22.53■■□□□ 1.2
USP15-206ENST00000546718 COL16A1Q07092 1604 aaPredicted RBP22.53■■□□□ 1.2
USP15-206ENST00000546718 SLAIN2Q9P270 581 aa22.51■■□□□ 1.19
USP15-206ENST00000546718 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
USP15-206ENST00000546718 SETD1AO15047 1707 aaKnown RBP22.49■■□□□ 1.19
USP15-206ENST00000546718 PPP1R15AO75807 674 aaPredicted RBP22.49■■□□□ 1.19
USP15-206ENST00000546718 DIP2AQ14689 1571 aa22.48■■□□□ 1.19
USP15-206ENST00000546718 IQGAP3Q86VI3 1631 aa22.48■■□□□ 1.19
USP15-206ENST00000546718 JCADQ9P266 1359 aa22.47■■□□□ 1.19
USP15-206ENST00000546718 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
USP15-206ENST00000546718 NCOA3Q9Y6Q9 1424 aa22.45■■□□□ 1.18
USP15-206ENST00000546718 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.45■■□□□ 1.18
USP15-206ENST00000546718 LRP6O75581 1613 aa22.44■■□□□ 1.18
USP15-206ENST00000546718 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
USP15-206ENST00000546718 HDGFP51858 240 aaKnown RBP22.42■■□□□ 1.18
USP15-206ENST00000546718 NUTM2DQ5VT03 806 aaPredicted RBP22.42■■□□□ 1.18
USP15-206ENST00000546718 ROCK1Q13464 1354 aa22.41■■□□□ 1.18
USP15-206ENST00000546718 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.41■■□□□ 1.18
USP15-206ENST00000546718 PIK3R4Q99570 1358 aa22.4■■□□□ 1.18
USP15-206ENST00000546718 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
USP15-206ENST00000546718 TRPM2O94759 1503 aa22.39■■□□□ 1.17
USP15-206ENST00000546718 SHPRHQ149N8 1683 aa22.39■■□□□ 1.17
USP15-206ENST00000546718 PTPRUQ92729 1446 aa22.39■■□□□ 1.17
USP15-206ENST00000546718 NRXN3Q9Y4C0 1643 aa22.38■■□□□ 1.17
USP15-206ENST00000546718 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
USP15-206ENST00000546718 XRN1Q8IZH2 1706 aaKnown RBP22.36■■□□□ 1.17
USP15-206ENST00000546718 C19orf44Q9H6X5 657 aa22.35■■□□□ 1.17
USP15-206ENST00000546718 SPATA31A6Q5VVP1 1343 aa22.34■■□□□ 1.17
USP15-206ENST00000546718 CADPS2Q86UW7 1296 aa22.34■■□□□ 1.17
USP15-206ENST00000546718 NUP155O75694 1391 aa22.33■■□□□ 1.17
USP15-206ENST00000546718 SETBP1Q9Y6X0 1596 aa22.33■■□□□ 1.16
USP15-206ENST00000546718 SPHKAPQ2M3C7 1700 aa22.31■■□□□ 1.16
USP15-206ENST00000546718 ATF3P18847 181 aa22.31■■□□□ 1.16
USP15-206ENST00000546718 FOXD1Q16676 465 aa22.31■■□□□ 1.16
USP15-206ENST00000546718 DCCP43146 1447 aa22.31■■□□□ 1.16
USP15-206ENST00000546718 AMOTL2Q9Y2J4 779 aa22.3■■□□□ 1.16
USP15-206ENST00000546718 ASXL1Q8IXJ9 1541 aa22.3■■□□□ 1.16
USP15-206ENST00000546718 BRINP3Q76B58 766 aa22.29■■□□□ 1.16
USP15-206ENST00000546718 NHSL1Q5SYE7 1610 aa22.27■■□□□ 1.16
USP15-206ENST00000546718 MST1RQ04912 1400 aa22.26■■□□□ 1.15
USP15-206ENST00000546718 MEX3CQ5U5Q3 659 aaKnown RBP22.26■■□□□ 1.15
USP15-206ENST00000546718 ITGAEP38570 1179 aa22.24■■□□□ 1.15
USP15-206ENST00000546718 ZNF772Q68DY9 489 aaPredicted RBP22.24■■□□□ 1.15
USP15-206ENST00000546718 METP08581 1390 aa22.24■■□□□ 1.15
USP15-206ENST00000546718 CLTCL1P53675 1640 aa22.23■■□□□ 1.15
USP15-206ENST00000546718 NALCNQ8IZF0 1738 aa22.23■■□□□ 1.15
USP15-206ENST00000546718 NEXMIFQ5QGS0 1516 aa22.22■■□□□ 1.15
USP15-206ENST00000546718 SETD5Q9C0A6 1442 aa22.22■■□□□ 1.15
USP15-206ENST00000546718 SRCAPQ6ZRS2 3230 aa22.21■■□□□ 1.15
USP15-206ENST00000546718 TRIM52Q96A61 297 aa22.2■■□□□ 1.14
USP15-206ENST00000546718 ADGRL3Q9HAR2 1447 aa22.2■■□□□ 1.14
USP15-206ENST00000546718 UPF1Q92900 1129 aaKnown RBP eCLIP22.19■■□□□ 1.14
USP15-206ENST00000546718 NUTM2BA6NNL0 878 aaPredicted RBP22.17■■□□□ 1.14
USP15-206ENST00000546718 NUTM2EB1AL46 878 aaPredicted RBP22.17■■□□□ 1.14
USP15-206ENST00000546718 NUTM2AQ8IVF1 878 aaPredicted RBP22.17■■□□□ 1.14
USP15-206ENST00000546718 CDK12Q9NYV4 1490 aaPredicted RBP22.16■■□□□ 1.14
USP15-206ENST00000546718 ZNF326Q5BKZ1 582 aaKnown RBP22.16■■□□□ 1.14
USP15-206ENST00000546718 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
USP15-206ENST00000546718 AFF2P51816 1311 aa22.14■■□□□ 1.14
USP15-206ENST00000546718 DDX17Q92841 729 aaKnown RBP22.14■■□□□ 1.13
USP15-206ENST00000546718 PNPLA6Q8IY17 1366 aa22.13■■□□□ 1.13
USP15-206ENST00000546718 RXRBP28702 533 aa22.13■■□□□ 1.13
USP15-206ENST00000546718 PPARGC1BQ86YN6 1023 aaKnown RBP22.13■■□□□ 1.13
USP15-206ENST00000546718 LAMC1P11047 1609 aa22.12■■□□□ 1.13
USP15-206ENST00000546718 KIF1BO60333 1816 aa22.11■■□□□ 1.13
USP15-206ENST00000546718 PTCH1Q13635 1447 aa22.1■■□□□ 1.13
USP15-206ENST00000546718 LRRC59Q96AG4 307 aaKnown RBP22.1■■□□□ 1.13
USP15-206ENST00000546718 RGS12O14924 1447 aa22.09■■□□□ 1.13
USP15-206ENST00000546718 C1orf167Q5SNV9 1468 aa22.09■■□□□ 1.13
USP15-206ENST00000546718 NAIPQ13075 1403 aa22.08■■□□□ 1.13
USP15-206ENST00000546718 EP400Q96L91 3159 aa22.08■■□□□ 1.12
USP15-206ENST00000546718 PRAG1Q86YV5 1406 aa22.06■■□□□ 1.12
USP15-206ENST00000546718 C8orf37Q96NL8 207 aa22.06■■□□□ 1.12
USP15-206ENST00000546718 ROBO2Q9HCK4 1378 aa22.06■■□□□ 1.12
USP15-206ENST00000546718 RRBP1Q9P2E9 1410 aaKnown RBP22.05■■□□□ 1.12
USP15-206ENST00000546718 PPLO60437 1756 aa22.01■■□□□ 1.11
USP15-206ENST00000546718 QTRT2Q9H974 415 aaKnown RBP22■■□□□ 1.11
USP15-206ENST00000546718 SOS2Q07890 1332 aaPredicted RBP22■■□□□ 1.11
USP15-206ENST00000546718 RBM6P78332 1123 aaKnown RBP21.99■■□□□ 1.11
USP15-206ENST00000546718 ORAI2Q96SN7 254 aa21.99■■□□□ 1.11
USP15-206ENST00000546718 COL22A1Q8NFW1 1626 aaPredicted RBP21.98■■□□□ 1.11
USP15-206ENST00000546718 ADAMTS2O95450 1211 aa21.98■■□□□ 1.11
USP15-206ENST00000546718 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
USP15-206ENST00000546718 HFM1A2PYH4 1435 aa21.97■■□□□ 1.11
USP15-206ENST00000546718 CDC42BPGQ6DT37 1551 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms