RNA–Protein interactions for RNA: ENST00000546656.1

KRT18-203, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-203ENST00000546656 RRBP1Q9P2E9 1410 aaKnown RBP21.33■■□□□ 1.01
KRT18-203ENST00000546656 CHGAP10645 457 aaKnown RBP21.33■■□□□ 1.01
KRT18-203ENST00000546656 BCANQ96GW7 911 aa21.33■■□□□ 1.01
KRT18-203ENST00000546656 MYO5BQ9ULV0 1848 aa21.33■■□□□ 1.01
KRT18-203ENST00000546656 RIMS2Q9UQ26 1411 aa21.31■■□□□ 1
KRT18-203ENST00000546656 XIRP1Q702N8 1843 aaKnown RBP21.31■■□□□ 1
KRT18-203ENST00000546656 PPP1R15AO75807 674 aaPredicted RBP21.3■■□□□ 1
KRT18-203ENST00000546656 KCNA6P17658 529 aa21.29■■□□□ 1
KRT18-203ENST00000546656 NUTM2DQ5VT03 806 aaPredicted RBP21.28■■□□□ 1
KRT18-203ENST00000546656 RBM33Q96EV2 1170 aaKnown RBP21.28■■□□□ 1
KRT18-203ENST00000546656 TMEM94Q12767 1356 aa21.27■■□□□ 1
KRT18-203ENST00000546656 PLEKHG1Q9ULL1 1385 aa21.27■■□□□ 1
KRT18-203ENST00000546656 NWD1Q149M9 1564 aa21.24■□□□□ 0.99
KRT18-203ENST00000546656 HDGFP51858 240 aaKnown RBP21.24■□□□□ 0.99
KRT18-203ENST00000546656 PROSER2Q86WR7 435 aaPredicted RBP21.24■□□□□ 0.99
KRT18-203ENST00000546656 NAIPQ13075 1403 aa21.23■□□□□ 0.99
KRT18-203ENST00000546656 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
KRT18-203ENST00000546656 NKTRP30414 1462 aaKnown RBP21.21■□□□□ 0.99
KRT18-203ENST00000546656 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.21■□□□□ 0.99
KRT18-203ENST00000546656 SPHKAPQ2M3C7 1700 aa21.2■□□□□ 0.98
KRT18-203ENST00000546656 ADAMTS13Q76LX8 1427 aa21.19■□□□□ 0.98
KRT18-203ENST00000546656 TBX22Q9Y458 520 aa21.17■□□□□ 0.98
KRT18-203ENST00000546656 CHD2O14647 1828 aaKnown RBP21.16■□□□□ 0.98
KRT18-203ENST00000546656 HFM1A2PYH4 1435 aa21.16■□□□□ 0.98
KRT18-203ENST00000546656 TRIM52Q96A61 297 aa21.14■□□□□ 0.97
KRT18-203ENST00000546656 MSH6P52701 1360 aa21.13■□□□□ 0.97
KRT18-203ENST00000546656 SOCS7O14512 581 aa21.13■□□□□ 0.97
KRT18-203ENST00000546656 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
KRT18-203ENST00000546656 CLTCL1P53675 1640 aa21.13■□□□□ 0.97
KRT18-203ENST00000546656 DIP2AQ14689 1571 aa21.13■□□□□ 0.97
KRT18-203ENST00000546656 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
KRT18-203ENST00000546656 TRPM2O94759 1503 aa21.12■□□□□ 0.97
KRT18-203ENST00000546656 ROBO1Q9Y6N7 1651 aa21.11■□□□□ 0.97
KRT18-203ENST00000546656 NRXN3Q9Y4C0 1643 aa21.08■□□□□ 0.97
KRT18-203ENST00000546656 PTPRUQ92729 1446 aa21.08■□□□□ 0.97
KRT18-203ENST00000546656 PIK3R4Q99570 1358 aa21.08■□□□□ 0.96
KRT18-203ENST00000546656 C14orf37Q86TY3 774 aa21.07■□□□□ 0.96
KRT18-203ENST00000546656 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
KRT18-203ENST00000546656 SLC4A1APQ9BWU0 796 aaKnown RBP21.06■□□□□ 0.96
KRT18-203ENST00000546656 SLAIN2Q9P270 581 aa21.06■□□□□ 0.96
KRT18-203ENST00000546656 AMOTL2Q9Y2J4 779 aa21.06■□□□□ 0.96
KRT18-203ENST00000546656 SETBP1Q9Y6X0 1596 aa21.06■□□□□ 0.96
KRT18-203ENST00000546656 NEXMIFQ5QGS0 1516 aa21.05■□□□□ 0.96
KRT18-203ENST00000546656 NCOA3Q9Y6Q9 1424 aa21.03■□□□□ 0.96
KRT18-203ENST00000546656 METP08581 1390 aa21.02■□□□□ 0.96
KRT18-203ENST00000546656 KIF1BO60333 1816 aa21.01■□□□□ 0.95
KRT18-203ENST00000546656 FOXD1Q16676 465 aa21.01■□□□□ 0.95
KRT18-203ENST00000546656 XRN1Q8IZH2 1706 aaKnown RBP21■□□□□ 0.95
KRT18-203ENST00000546656 SIPA1L2Q9P2F8 1722 aaPredicted RBP21■□□□□ 0.95
KRT18-203ENST00000546656 C19orf44Q9H6X5 657 aa20.99■□□□□ 0.95
KRT18-203ENST00000546656 ATF3P18847 181 aa20.97■□□□□ 0.95
KRT18-203ENST00000546656 PHLPP1O60346 1717 aa20.97■□□□□ 0.95
KRT18-203ENST00000546656 CADPS2Q86UW7 1296 aa20.96■□□□□ 0.95
KRT18-203ENST00000546656 RGS17Q9UGC6 210 aaPredicted RBP20.93■□□□□ 0.94
KRT18-203ENST00000546656 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
KRT18-203ENST00000546656 COL16A1Q07092 1604 aaPredicted RBP20.92■□□□□ 0.94
KRT18-203ENST00000546656 MPHOSPH9Q99550 1183 aa20.91■□□□□ 0.94
KRT18-203ENST00000546656 RPGRIP1LQ68CZ1 1315 aa20.9■□□□□ 0.94
KRT18-203ENST00000546656 CCDC144AA2RUR9 1427 aa20.89■□□□□ 0.94
KRT18-203ENST00000546656 DCCP43146 1447 aa20.89■□□□□ 0.94
KRT18-203ENST00000546656 JCADQ9P266 1359 aa20.89■□□□□ 0.93
KRT18-203ENST00000546656 PPLO60437 1756 aa20.89■□□□□ 0.93
KRT18-203ENST00000546656 SETD1AO15047 1707 aaKnown RBP20.89■□□□□ 0.93
KRT18-203ENST00000546656 BRINP3Q76B58 766 aa20.88■□□□□ 0.93
KRT18-203ENST00000546656 AHDC1Q5TGY3 1603 aaPredicted RBP20.87■□□□□ 0.93
KRT18-203ENST00000546656 MST1RQ04912 1400 aa20.87■□□□□ 0.93
KRT18-203ENST00000546656 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
KRT18-203ENST00000546656 NALCNQ8IZF0 1738 aa20.86■□□□□ 0.93
KRT18-203ENST00000546656 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
KRT18-203ENST00000546656 SETD5Q9C0A6 1442 aa20.85■□□□□ 0.93
KRT18-203ENST00000546656 ROBO2Q9HCK4 1378 aa20.85■□□□□ 0.93
KRT18-203ENST00000546656 ASXL1Q8IXJ9 1541 aa20.84■□□□□ 0.93
KRT18-203ENST00000546656 SPATA31E1Q6ZUB1 1445 aa20.84■□□□□ 0.93
KRT18-203ENST00000546656 PTCH1Q13635 1447 aa20.83■□□□□ 0.93
KRT18-203ENST00000546656 ADGRF5Q8IZF2 1346 aa20.82■□□□□ 0.92
KRT18-203ENST00000546656 POTEAQ6S8J7 498 aa20.81■□□□□ 0.92
KRT18-203ENST00000546656 LRP6O75581 1613 aa20.81■□□□□ 0.92
KRT18-203ENST00000546656 DDX17Q92841 729 aaKnown RBP20.79■□□□□ 0.92
KRT18-203ENST00000546656 RAB3GAP2Q9H2M9 1393 aa20.79■□□□□ 0.92
KRT18-203ENST00000546656 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
KRT18-203ENST00000546656 IFT172Q9UG01 1749 aa20.78■□□□□ 0.92
KRT18-203ENST00000546656 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
KRT18-203ENST00000546656 SHPRHQ149N8 1683 aa20.77■□□□□ 0.92
KRT18-203ENST00000546656 NHSL1Q5SYE7 1610 aa20.77■□□□□ 0.92
KRT18-203ENST00000546656 ANKRD30BQ9BXX2 1392 aa20.76■□□□□ 0.91
KRT18-203ENST00000546656 C1orf167Q5SNV9 1468 aa20.75■□□□□ 0.91
KRT18-203ENST00000546656 MEX3CQ5U5Q3 659 aaKnown RBP20.75■□□□□ 0.91
KRT18-203ENST00000546656 STK26Q9P289 416 aa20.74■□□□□ 0.91
KRT18-203ENST00000546656 ACIN1Q9UKV3 1341 aaKnown RBP20.74■□□□□ 0.91
KRT18-203ENST00000546656 NUTM2BA6NNL0 878 aaPredicted RBP20.73■□□□□ 0.91
KRT18-203ENST00000546656 NUTM2EB1AL46 878 aaPredicted RBP20.73■□□□□ 0.91
KRT18-203ENST00000546656 NUTM2AQ8IVF1 878 aaPredicted RBP20.73■□□□□ 0.91
KRT18-203ENST00000546656 PIK3C2GO75747 1445 aa20.72■□□□□ 0.91
KRT18-203ENST00000546656 TMEM132EQ6IEE7 984 aa20.72■□□□□ 0.91
KRT18-203ENST00000546656 ORAI2Q96SN7 254 aa20.72■□□□□ 0.91
KRT18-203ENST00000546656 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
KRT18-203ENST00000546656 WAPLQ7Z5K2 1190 aa20.69■□□□□ 0.9
KRT18-203ENST00000546656 LRRC59Q96AG4 307 aaKnown RBP20.69■□□□□ 0.9
KRT18-203ENST00000546656 TECPR2O15040 1411 aa20.68■□□□□ 0.9
KRT18-203ENST00000546656 PNPLA6Q8IY17 1366 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms