RNA–Protein interactions for RNA: ENST00000546489.5

CDK4-203, Transcript of cyclin dependent kinase 4, humanhuman

TSL 5

Gene CDK4, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-203ENST00000546489 IFT172Q9UG01 1749 aa19.26■□□□□ 0.67
CDK4-203ENST00000546489 LTKP29376 864 aa19.26■□□□□ 0.67
CDK4-203ENST00000546489 DHX57Q6P158 1386 aaKnown RBP19.26■□□□□ 0.67
CDK4-203ENST00000546489 SPATA31E1Q6ZUB1 1445 aa19.25■□□□□ 0.67
CDK4-203ENST00000546489 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
CDK4-203ENST00000546489 TXNDC2Q86VQ3 553 aa19.25■□□□□ 0.67
CDK4-203ENST00000546489 EID1Q9Y6B2 187 aa19.25■□□□□ 0.67
CDK4-203ENST00000546489 NPHP4O75161 1426 aaPredicted RBP19.24■□□□□ 0.67
CDK4-203ENST00000546489 HDGFP51858 240 aaKnown RBP19.23■□□□□ 0.67
CDK4-203ENST00000546489 ZNF326Q5BKZ1 582 aaKnown RBP19.21■□□□□ 0.67
CDK4-203ENST00000546489 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.21■□□□□ 0.67
CDK4-203ENST00000546489 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
CDK4-203ENST00000546489 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
CDK4-203ENST00000546489 NRXN3Q9Y4C0 1643 aa19.17■□□□□ 0.66
CDK4-203ENST00000546489 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
CDK4-203ENST00000546489 SETBP1Q9Y6X0 1596 aa19.15■□□□□ 0.66
CDK4-203ENST00000546489 DIP2AQ14689 1571 aa19.15■□□□□ 0.66
CDK4-203ENST00000546489 RGL3Q3MIN7 710 aa19.14■□□□□ 0.65
CDK4-203ENST00000546489 NUTM2DQ5VT03 806 aaPredicted RBP19.14■□□□□ 0.65
CDK4-203ENST00000546489 STRCP1A6NGW2 1772 aa19.12■□□□□ 0.65
CDK4-203ENST00000546489 SETD1AO15047 1707 aaKnown RBP19.12■□□□□ 0.65
CDK4-203ENST00000546489 VGFO15240 615 aaPredicted RBP19.12■□□□□ 0.65
CDK4-203ENST00000546489 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
CDK4-203ENST00000546489 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
CDK4-203ENST00000546489 LTBP4Q8N2S1 1624 aa19.11■□□□□ 0.65
CDK4-203ENST00000546489 MYOM2P54296 1465 aa19.1■□□□□ 0.65
CDK4-203ENST00000546489 BCANQ96GW7 911 aa19.08■□□□□ 0.64
CDK4-203ENST00000546489 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
CDK4-203ENST00000546489 SIN3AQ96ST3 1273 aa19.08■□□□□ 0.64
CDK4-203ENST00000546489 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.64
CDK4-203ENST00000546489 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
CDK4-203ENST00000546489 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
CDK4-203ENST00000546489 ZNF335Q9H4Z2 1342 aaPredicted RBP19.06■□□□□ 0.64
CDK4-203ENST00000546489 ALKQ9UM73 1620 aa19.06■□□□□ 0.64
CDK4-203ENST00000546489 ADGRF5Q8IZF2 1346 aa19.05■□□□□ 0.64
CDK4-203ENST00000546489 LAMC1P11047 1609 aa19.05■□□□□ 0.64
CDK4-203ENST00000546489 SENP3Q9H4L4 574 aaPredicted RBP19.05■□□□□ 0.64
CDK4-203ENST00000546489 PIK3C2GO75747 1445 aa19.05■□□□□ 0.64
CDK4-203ENST00000546489 CPS1P31327 1500 aa19.05■□□□□ 0.64
CDK4-203ENST00000546489 STAC3Q96MF2 364 aa19.04■□□□□ 0.64
CDK4-203ENST00000546489 PIK3R4Q99570 1358 aa19.04■□□□□ 0.64
CDK4-203ENST00000546489 CLSPNQ9HAW4 1339 aa19.02■□□□□ 0.64
CDK4-203ENST00000546489 DCAF11Q8TEB1 546 aa19.02■□□□□ 0.64
CDK4-203ENST00000546489 XRN1Q8IZH2 1706 aaKnown RBP19.01■□□□□ 0.63
CDK4-203ENST00000546489 NEUROD1Q13562 356 aa19.01■□□□□ 0.63
CDK4-203ENST00000546489 XIRP1Q702N8 1843 aaKnown RBP19.01■□□□□ 0.63
CDK4-203ENST00000546489 NKTRP30414 1462 aaKnown RBP18.99■□□□□ 0.63
CDK4-203ENST00000546489 KCNA6P17658 529 aa18.99■□□□□ 0.63
CDK4-203ENST00000546489 KIAA1210Q9ULL0 1709 aa18.99■□□□□ 0.63
CDK4-203ENST00000546489 METP08581 1390 aa18.98■□□□□ 0.63
CDK4-203ENST00000546489 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
CDK4-203ENST00000546489 L3MBTL2Q969R5 705 aa18.97■□□□□ 0.63
CDK4-203ENST00000546489 KDM2AQ9Y2K7 1162 aa18.97■□□□□ 0.63
CDK4-203ENST00000546489 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
CDK4-203ENST00000546489 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
CDK4-203ENST00000546489 LRRC7Q96NW7 1537 aa18.96■□□□□ 0.63
CDK4-203ENST00000546489 C14orf93Q9H972 538 aaKnown RBP18.96■□□□□ 0.63
CDK4-203ENST00000546489 KNDC1Q76NI1 1749 aa18.96■□□□□ 0.63
CDK4-203ENST00000546489 CCER1Q8TC90 406 aaPredicted RBP18.94■□□□□ 0.62
CDK4-203ENST00000546489 CERKQ8TCT0 537 aa18.94■□□□□ 0.62
CDK4-203ENST00000546489 PRAG1Q86YV5 1406 aa18.93■□□□□ 0.62
CDK4-203ENST00000546489 TONSLQ96HA7 1378 aa18.93■□□□□ 0.62
CDK4-203ENST00000546489 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
CDK4-203ENST00000546489 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
CDK4-203ENST00000546489 ADGRB1O14514 1584 aa18.91■□□□□ 0.62
CDK4-203ENST00000546489 TRPM1Q7Z4N2 1603 aa18.91■□□□□ 0.62
CDK4-203ENST00000546489 PTCH1Q13635 1447 aa18.89■□□□□ 0.61
CDK4-203ENST00000546489 LRPPRCP42704 1394 aaKnown RBP18.88■□□□□ 0.61
CDK4-203ENST00000546489 TECPR2O15040 1411 aa18.88■□□□□ 0.61
CDK4-203ENST00000546489 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
CDK4-203ENST00000546489 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
CDK4-203ENST00000546489 TMEM132EQ6IEE7 984 aa18.87■□□□□ 0.61
CDK4-203ENST00000546489 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
CDK4-203ENST00000546489 NCOA3Q9Y6Q9 1424 aa18.87■□□□□ 0.61
CDK4-203ENST00000546489 ABCC11Q96J66 1382 aa18.85■□□□□ 0.61
CDK4-203ENST00000546489 TIMELESSQ9UNS1 1208 aa18.85■□□□□ 0.61
CDK4-203ENST00000546489 NALCNQ8IZF0 1738 aa18.84■□□□□ 0.61
CDK4-203ENST00000546489 ARHGEF28Q8N1W1 1705 aaKnown RBP18.84■□□□□ 0.61
CDK4-203ENST00000546489 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
CDK4-203ENST00000546489 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.83■□□□□ 0.61
CDK4-203ENST00000546489 ROBO2Q9HCK4 1378 aa18.83■□□□□ 0.61
CDK4-203ENST00000546489 NBPF8Q3BBV2 869 aa18.81■□□□□ 0.6
CDK4-203ENST00000546489 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
CDK4-203ENST00000546489 FAM135BQ49AJ0 1406 aa18.81■□□□□ 0.6
CDK4-203ENST00000546489 SIRT1Q96EB6 747 aa18.8■□□□□ 0.6
CDK4-203ENST00000546489 STK26Q9P289 416 aa18.8■□□□□ 0.6
CDK4-203ENST00000546489 NBPF1Q3BBV0 1214 aa18.79■□□□□ 0.6
CDK4-203ENST00000546489 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
CDK4-203ENST00000546489 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
CDK4-203ENST00000546489 MSH6P52701 1360 aa18.78■□□□□ 0.6
CDK4-203ENST00000546489 GPRASP1Q5JY77 1395 aa18.76■□□□□ 0.59
CDK4-203ENST00000546489 DCCP43146 1447 aa18.75■□□□□ 0.59
CDK4-203ENST00000546489 C14orf37Q86TY3 774 aa18.75■□□□□ 0.59
CDK4-203ENST00000546489 C19orf44Q9H6X5 657 aa18.75■□□□□ 0.59
CDK4-203ENST00000546489 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
CDK4-203ENST00000546489 PLEKHH1Q9ULM0 1364 aa18.75■□□□□ 0.59
CDK4-203ENST00000546489 WAPLQ7Z5K2 1190 aa18.74■□□□□ 0.59
CDK4-203ENST00000546489 TRAK1Q9UPV9 953 aa18.74■□□□□ 0.59
CDK4-203ENST00000546489 CDC42BPGQ6DT37 1551 aa18.73■□□□□ 0.59
CDK4-203ENST00000546489 UBAP1LF5GYI3 381 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms