RNA–Protein interactions for RNA: ENST00000546309.6

KDM1B-203, Transcript of lysine demethylase 1B, humanhuman

TSL 1 (best) BASIC

Gene KDM1B, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-203ENST00000546309 FAM50AQ14320 339 aaKnown RBP11.5□□□□□ -0.57
KDM1B-203ENST00000546309 SLC26A8Q96RN1 970 aa11.5□□□□□ -0.57
KDM1B-203ENST00000546309 SENP3Q9H4L4 574 aaPredicted RBP11.49□□□□□ -0.57
KDM1B-203ENST00000546309 NWD1Q149M9 1564 aa11.49□□□□□ -0.57
KDM1B-203ENST00000546309 ACIN1Q9UKV3 1341 aaKnown RBP11.48□□□□□ -0.57
KDM1B-203ENST00000546309 ADAMTS13Q76LX8 1427 aa11.48□□□□□ -0.57
KDM1B-203ENST00000546309 CHD2O14647 1828 aaKnown RBP11.48□□□□□ -0.57
KDM1B-203ENST00000546309 IQGAP3Q86VI3 1631 aa11.47□□□□□ -0.57
KDM1B-203ENST00000546309 CLSPNQ9HAW4 1339 aa11.47□□□□□ -0.57
KDM1B-203ENST00000546309 NRXN3Q9Y4C0 1643 aa11.46□□□□□ -0.57
KDM1B-203ENST00000546309 SETD5Q9C0A6 1442 aa11.46□□□□□ -0.57
KDM1B-203ENST00000546309 TMEM94Q12767 1356 aa11.46□□□□□ -0.57
KDM1B-203ENST00000546309 RPRD2Q5VT52 1461 aaKnown RBP11.45□□□□□ -0.58
KDM1B-203ENST00000546309 HFM1A2PYH4 1435 aa11.45□□□□□ -0.58
KDM1B-203ENST00000546309 PTPRUQ92729 1446 aa11.45□□□□□ -0.58
KDM1B-203ENST00000546309 ROCK1Q13464 1354 aa11.45□□□□□ -0.58
KDM1B-203ENST00000546309 KCNA6P17658 529 aa11.44□□□□□ -0.58
KDM1B-203ENST00000546309 NUTM2DQ5VT03 806 aaPredicted RBP11.43□□□□□ -0.58
KDM1B-203ENST00000546309 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
KDM1B-203ENST00000546309 KANK1Q14678 1352 aa11.42□□□□□ -0.58
KDM1B-203ENST00000546309 CCER1Q8TC90 406 aaPredicted RBP11.42□□□□□ -0.58
KDM1B-203ENST00000546309 ROBO1Q9Y6N7 1651 aa11.42□□□□□ -0.58
KDM1B-203ENST00000546309 RAB3GAP2Q9H2M9 1393 aa11.41□□□□□ -0.58
KDM1B-203ENST00000546309 PLEKHG1Q9ULL1 1385 aa11.41□□□□□ -0.58
KDM1B-203ENST00000546309 SLC52A1Q9NWF4 448 aa11.41□□□□□ -0.58
KDM1B-203ENST00000546309 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
KDM1B-203ENST00000546309 ITGAEP38570 1179 aa11.4□□□□□ -0.58
KDM1B-203ENST00000546309 NAIPQ13075 1403 aa11.4□□□□□ -0.58
KDM1B-203ENST00000546309 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
KDM1B-203ENST00000546309 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
KDM1B-203ENST00000546309 EID1Q9Y6B2 187 aa11.38□□□□□ -0.59
KDM1B-203ENST00000546309 NUP155O75694 1391 aa11.38□□□□□ -0.59
KDM1B-203ENST00000546309 NKTRP30414 1462 aaKnown RBP11.38□□□□□ -0.59
KDM1B-203ENST00000546309 SPHKAPQ2M3C7 1700 aa11.38□□□□□ -0.59
KDM1B-203ENST00000546309 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
KDM1B-203ENST00000546309 SETD1AO15047 1707 aaKnown RBP11.37□□□□□ -0.59
KDM1B-203ENST00000546309 XRN1Q8IZH2 1706 aaKnown RBP11.37□□□□□ -0.59
KDM1B-203ENST00000546309 COL16A1Q07092 1604 aaPredicted RBP11.36□□□□□ -0.59
KDM1B-203ENST00000546309 POTEAQ6S8J7 498 aa11.36□□□□□ -0.59
KDM1B-203ENST00000546309 PROSER2Q86WR7 435 aaPredicted RBP11.36□□□□□ -0.59
KDM1B-203ENST00000546309 STAG3Q9UJ98 1225 aa11.36□□□□□ -0.59
KDM1B-203ENST00000546309 TBX22Q9Y458 520 aa11.36□□□□□ -0.59
KDM1B-203ENST00000546309 METP08581 1390 aa11.35□□□□□ -0.59
KDM1B-203ENST00000546309 LRP6O75581 1613 aa11.35□□□□□ -0.59
KDM1B-203ENST00000546309 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
KDM1B-203ENST00000546309 DIP2AQ14689 1571 aa11.33□□□□□ -0.6
KDM1B-203ENST00000546309 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
KDM1B-203ENST00000546309 SLAIN2Q9P270 581 aa11.32□□□□□ -0.6
KDM1B-203ENST00000546309 PHLPP1O60346 1717 aa11.31□□□□□ -0.6
KDM1B-203ENST00000546309 CHGAP10645 457 aaKnown RBP11.3□□□□□ -0.6
KDM1B-203ENST00000546309 BCANQ96GW7 911 aa11.3□□□□□ -0.6
KDM1B-203ENST00000546309 TRPM2O94759 1503 aa11.3□□□□□ -0.6
KDM1B-203ENST00000546309 TIMELESSQ9UNS1 1208 aa11.29□□□□□ -0.6
KDM1B-203ENST00000546309 AMOTL2Q9Y2J4 779 aa11.29□□□□□ -0.6
KDM1B-203ENST00000546309 NALCNQ8IZF0 1738 aa11.29□□□□□ -0.6
KDM1B-203ENST00000546309 FOXD1Q16676 465 aa11.28□□□□□ -0.6
KDM1B-203ENST00000546309 DDX17Q92841 729 aaKnown RBP11.28□□□□□ -0.6
KDM1B-203ENST00000546309 PIK3R4Q99570 1358 aa11.28□□□□□ -0.6
KDM1B-203ENST00000546309 AHDC1Q5TGY3 1603 aaPredicted RBP11.27□□□□□ -0.6
KDM1B-203ENST00000546309 MST1RQ04912 1400 aa11.27□□□□□ -0.6
KDM1B-203ENST00000546309 BRINP3Q76B58 766 aa11.27□□□□□ -0.61
KDM1B-203ENST00000546309 NCOA3Q9Y6Q9 1424 aa11.26□□□□□ -0.61
KDM1B-203ENST00000546309 MSH6P52701 1360 aa11.26□□□□□ -0.61
KDM1B-203ENST00000546309 PPLO60437 1756 aa11.26□□□□□ -0.61
KDM1B-203ENST00000546309 ASXL1Q8IXJ9 1541 aa11.25□□□□□ -0.61
KDM1B-203ENST00000546309 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.25□□□□□ -0.61
KDM1B-203ENST00000546309 ROBO2Q9HCK4 1378 aa11.25□□□□□ -0.61
KDM1B-203ENST00000546309 NHSL1Q5SYE7 1610 aa11.24□□□□□ -0.61
KDM1B-203ENST00000546309 KIF1BO60333 1816 aa11.24□□□□□ -0.61
KDM1B-203ENST00000546309 PPP1R15AO75807 674 aaPredicted RBP11.24□□□□□ -0.61
KDM1B-203ENST00000546309 C19orf44Q9H6X5 657 aa11.24□□□□□ -0.61
KDM1B-203ENST00000546309 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
KDM1B-203ENST00000546309 SPATA31E1Q6ZUB1 1445 aa11.23□□□□□ -0.61
KDM1B-203ENST00000546309 PRAG1Q86YV5 1406 aa11.22□□□□□ -0.61
KDM1B-203ENST00000546309 IFT172Q9UG01 1749 aa11.22□□□□□ -0.61
KDM1B-203ENST00000546309 LAMC1P11047 1609 aa11.21□□□□□ -0.61
KDM1B-203ENST00000546309 JCADQ9P266 1359 aa11.21□□□□□ -0.61
KDM1B-203ENST00000546309 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
KDM1B-203ENST00000546309 MPHOSPH9Q99550 1183 aa11.21□□□□□ -0.61
KDM1B-203ENST00000546309 ADGRL3Q9HAR2 1447 aa11.2□□□□□ -0.62
KDM1B-203ENST00000546309 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
KDM1B-203ENST00000546309 HDGFP51858 240 aaKnown RBP11.2□□□□□ -0.62
KDM1B-203ENST00000546309 DCCP43146 1447 aa11.19□□□□□ -0.62
KDM1B-203ENST00000546309 MEX3CQ5U5Q3 659 aaKnown RBP11.19□□□□□ -0.62
KDM1B-203ENST00000546309 TRIM52Q96A61 297 aa11.18□□□□□ -0.62
KDM1B-203ENST00000546309 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
KDM1B-203ENST00000546309 C1orf167Q5SNV9 1468 aa11.18□□□□□ -0.62
KDM1B-203ENST00000546309 PLEKHH1Q9ULM0 1364 aa11.17□□□□□ -0.62
KDM1B-203ENST00000546309 ZNF326Q5BKZ1 582 aaKnown RBP11.17□□□□□ -0.62
KDM1B-203ENST00000546309 CADPS2Q86UW7 1296 aa11.17□□□□□ -0.62
KDM1B-203ENST00000546309 PNPLA6Q8IY17 1366 aa11.16□□□□□ -0.62
KDM1B-203ENST00000546309 ANKRD30BQ9BXX2 1392 aa11.16□□□□□ -0.62
KDM1B-203ENST00000546309 PTCH1Q13635 1447 aa11.16□□□□□ -0.62
KDM1B-203ENST00000546309 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
KDM1B-203ENST00000546309 ATF3P18847 181 aa11.14□□□□□ -0.63
KDM1B-203ENST00000546309 RGPD8O14715 1765 aaPredicted RBP11.13□□□□□ -0.63
KDM1B-203ENST00000546309 SOS2Q07890 1332 aaPredicted RBP11.13□□□□□ -0.63
KDM1B-203ENST00000546309 TECPR2O15040 1411 aa11.13□□□□□ -0.63
KDM1B-203ENST00000546309 TMEM132EQ6IEE7 984 aa11.13□□□□□ -0.63
KDM1B-203ENST00000546309 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms